; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy5G012855 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G012855
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionGag-pol polyprotein
Genome locationGy14Chr5:15356131..15356544
RNA-Seq ExpressionCsGy5G012855
SyntenyCsGy5G012855
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041594.1 uncharacterized protein E6C27_scaffold93G00610 [Cucumis melo var. makuwa]4.00e-5262.77Show/hide
Query:  MELINQAGLSRTILNVGPFYPKLIREVIANLSSDFDDPSSPDYQTIHVRGRTLVISPYVINTFLGLTPSENADLPTHSTDTLASVLTGGSLIVWPLTGIP
        M+LI++AGL +TI NVGPFYP+LIRE I NL  +F++PSS DYQT+H+RG   VISP  IN FLG T   +       T+ LA+VL+GG+L  WP+ GIP
Subjt:  MELINQAGLSRTILNVGPFYPKLIREVIANLSSDFDDPSSPDYQTIHVRGRTLVISPYVINTFLGLTPSENADLPTHSTDTLASVLTGGSLIVWPLTGIP

Query:  SAALSVKYAILHKIGIVNWFPSSHASSVSVALASFLF
        +AALSVKY ILHKIGI NWFPSSHASS+SVAL +FL+
Subjt:  SAALSVKYAILHKIGIVNWFPSSHASSVSVALASFLF

KAA0054586.1 uncharacterized protein E6C27_scaffold24G003810 [Cucumis melo var. makuwa]7.53e-5263.5Show/hide
Query:  MELINQAGLSRTILNVGPFYPKLIREVIANLSSDFDDPSSPDYQTIHVRGRTLVISPYVINTFLGLTPSENADLPTHSTDTLASVLTGGSLIVWPLTGIP
        M LI +AGL +TI +V PFYP+LIRE I NL +DF++PSSP+YQT+H+RG    ISP VIN FLG   S N    + STD LASVL+GG+L  WP+ GIP
Subjt:  MELINQAGLSRTILNVGPFYPKLIREVIANLSSDFDDPSSPDYQTIHVRGRTLVISPYVINTFLGLTPSENADLPTHSTDTLASVLTGGSLIVWPLTGIP

Query:  SAALSVKYAILHKIGIVNWFPSSHASSVSVALASFLF
        + ALSVKYAIL++IGI NWFPSSHASSVS AL +FL+
Subjt:  SAALSVKYAILHKIGIVNWFPSSHASSVSVALASFLF

KAE8652900.1 hypothetical protein Csa_022673, partial [Cucumis sativus]8.38e-67100Show/hide
Query:  MELINQAGLSRTILNVGPFYPKLIREVIANLSSDFDDPSSPDYQTIHVRGRTLVISPYVINTFLGLTPSENADLPTHSTDTLASVLTGGSLIVWPLTGIP
        MELINQAGLSRTILNVGPFYPKLIREVIANLSSDFDDPSSPDYQTIHVRGRTLVISPYVINTFLGLTPSENADLPTHSTDTLASVLTGGSLIVWPLTGIP
Subjt:  MELINQAGLSRTILNVGPFYPKLIREVIANLSSDFDDPSSPDYQTIHVRGRTLVISPYVINTFLGLTPSENADLPTHSTDTLASVLTGGSLIVWPLTGIP

Query:  SAALSV
        SAALSV
Subjt:  SAALSV

KAE8652915.1 hypothetical protein Csa_004530 [Cucumis sativus]6.90e-92100Show/hide
Query:  MELINQAGLSRTILNVGPFYPKLIREVIANLSSDFDDPSSPDYQTIHVRGRTLVISPYVINTFLGLTPSENADLPTHSTDTLASVLTGGSLIVWPLTGIP
        MELINQAGLSRTILNVGPFYPKLIREVIANLSSDFDDPSSPDYQTIHVRGRTLVISPYVINTFLGLTPSENADLPTHSTDTLASVLTGGSLIVWPLTGIP
Subjt:  MELINQAGLSRTILNVGPFYPKLIREVIANLSSDFDDPSSPDYQTIHVRGRTLVISPYVINTFLGLTPSENADLPTHSTDTLASVLTGGSLIVWPLTGIP

Query:  SAALSVKYAILHKIGIVNWFPSSHASSVSVALASFLF
        SAALSVKYAILHKIGIVNWFPSSHASSVSVALASFLF
Subjt:  SAALSVKYAILHKIGIVNWFPSSHASSVSVALASFLF

XP_008466681.1 PREDICTED: uncharacterized protein LOC103504033 [Cucumis melo]3.69e-5262.77Show/hide
Query:  MELINQAGLSRTILNVGPFYPKLIREVIANLSSDFDDPSSPDYQTIHVRGRTLVISPYVINTFLGLTPSENADLPTHSTDTLASVLTGGSLIVWPLTGIP
        M+LI++AGL +TI NVGPFYP+LIRE I NL  +F++PSS DYQT+H+RG   VISP  IN FLG T   +       T+ LA+VL+GG+L  WP+ GIP
Subjt:  MELINQAGLSRTILNVGPFYPKLIREVIANLSSDFDDPSSPDYQTIHVRGRTLVISPYVINTFLGLTPSENADLPTHSTDTLASVLTGGSLIVWPLTGIP

Query:  SAALSVKYAILHKIGIVNWFPSSHASSVSVALASFLF
        +AALSVKY ILHKIGI NWFPSSHASS+SVAL +FL+
Subjt:  SAALSVKYAILHKIGIVNWFPSSHASSVSVALASFLF

TrEMBL top hitse value%identityAlignment
A0A1S3C633 uncharacterized protein LOC1034968726.88e-5262.77Show/hide
Query:  MELINQAGLSRTILNVGPFYPKLIREVIANLSSDFDDPSSPDYQTIHVRGRTLVISPYVINTFLGLTPSENADLPTHSTDTLASVLTGGSLIVWPLTGIP
        M+LI +AGL++TI NVGPFYP+LIRE I N  +DF+DPSSPDYQT+H+RG   VIS  VIN FLG          + ST+ LASVL+GG+L  WP+ GIP
Subjt:  MELINQAGLSRTILNVGPFYPKLIREVIANLSSDFDDPSSPDYQTIHVRGRTLVISPYVINTFLGLTPSENADLPTHSTDTLASVLTGGSLIVWPLTGIP

Query:  SAALSVKYAILHKIGIVNWFPSSHASSVSVALASFLF
        + ALS+KYAI HKIGI NWFPSS ASSVS AL +FL+
Subjt:  SAALSVKYAILHKIGIVNWFPSSHASSVSVALASFLF

A0A1S3CHW3 uncharacterized protein LOC1035011375.06e-5263.5Show/hide
Query:  MELINQAGLSRTILNVGPFYPKLIREVIANLSSDFDDPSSPDYQTIHVRGRTLVISPYVINTFLGLTPSENADLPTHSTDTLASVLTGGSLIVWPLTGIP
        M L ++AGL +TI NVGPFYP+LIRE I NL  DF+DPSS +YQT+H+RG   VISP VIN FLG T   +      +T+ LA+VL+GG+L  WP+ GIP
Subjt:  MELINQAGLSRTILNVGPFYPKLIREVIANLSSDFDDPSSPDYQTIHVRGRTLVISPYVINTFLGLTPSENADLPTHSTDTLASVLTGGSLIVWPLTGIP

Query:  SAALSVKYAILHKIGIVNWFPSSHASSVSVALASFLF
         AALSVKYAILHKIGI NWFPSSHASS+S AL +FL+
Subjt:  SAALSVKYAILHKIGIVNWFPSSHASSVSVALASFLF

A0A1S3CRT1 uncharacterized protein LOC1035040331.79e-5262.77Show/hide
Query:  MELINQAGLSRTILNVGPFYPKLIREVIANLSSDFDDPSSPDYQTIHVRGRTLVISPYVINTFLGLTPSENADLPTHSTDTLASVLTGGSLIVWPLTGIP
        M+LI++AGL +TI NVGPFYP+LIRE I NL  +F++PSS DYQT+H+RG   VISP  IN FLG T   +       T+ LA+VL+GG+L  WP+ GIP
Subjt:  MELINQAGLSRTILNVGPFYPKLIREVIANLSSDFDDPSSPDYQTIHVRGRTLVISPYVINTFLGLTPSENADLPTHSTDTLASVLTGGSLIVWPLTGIP

Query:  SAALSVKYAILHKIGIVNWFPSSHASSVSVALASFLF
        +AALSVKY ILHKIGI NWFPSSHASS+SVAL +FL+
Subjt:  SAALSVKYAILHKIGIVNWFPSSHASSVSVALASFLF

A0A5A7TDT9 Uncharacterized protein1.94e-5262.77Show/hide
Query:  MELINQAGLSRTILNVGPFYPKLIREVIANLSSDFDDPSSPDYQTIHVRGRTLVISPYVINTFLGLTPSENADLPTHSTDTLASVLTGGSLIVWPLTGIP
        M+LI++AGL +TI NVGPFYP+LIRE I NL  +F++PSS DYQT+H+RG   VISP  IN FLG T   +       T+ LA+VL+GG+L  WP+ GIP
Subjt:  MELINQAGLSRTILNVGPFYPKLIREVIANLSSDFDDPSSPDYQTIHVRGRTLVISPYVINTFLGLTPSENADLPTHSTDTLASVLTGGSLIVWPLTGIP

Query:  SAALSVKYAILHKIGIVNWFPSSHASSVSVALASFLF
        +AALSVKY ILHKIGI NWFPSSHASS+SVAL +FL+
Subjt:  SAALSVKYAILHKIGIVNWFPSSHASSVSVALASFLF

A0A5A7UK16 Uncharacterized protein3.65e-5263.5Show/hide
Query:  MELINQAGLSRTILNVGPFYPKLIREVIANLSSDFDDPSSPDYQTIHVRGRTLVISPYVINTFLGLTPSENADLPTHSTDTLASVLTGGSLIVWPLTGIP
        M LI +AGL +TI +V PFYP+LIRE I NL +DF++PSSP+YQT+H+RG    ISP VIN FLG   S N    + STD LASVL+GG+L  WP+ GIP
Subjt:  MELINQAGLSRTILNVGPFYPKLIREVIANLSSDFDDPSSPDYQTIHVRGRTLVISPYVINTFLGLTPSENADLPTHSTDTLASVLTGGSLIVWPLTGIP

Query:  SAALSVKYAILHKIGIVNWFPSSHASSVSVALASFLF
        + ALSVKYAIL++IGI NWFPSSHASSVS AL +FL+
Subjt:  SAALSVKYAILHKIGIVNWFPSSHASSVSVALASFLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTAATTAATCAGGCTGGACTTTCGCGCACGATTCTCAATGTTGGACCATTCTATCCCAAGCTCATCAGAGAGGTCATTGCTAATCTATCGTCTGATTTTGATGA
TCCAAGCAGTCCAGATTATCAAACAATTCATGTCAGAGGACGAACACTTGTCATCTCTCCCTATGTGATTAATACTTTCTTAGGGCTTACTCCGTCGGAGAATGCTGATT
TACCAACCCACTCAACAGATACCCTGGCATCTGTGTTGACAGGAGGGTCTCTTATAGTTTGGCCACTCACTGGCATTCCTTCTGCTGCACTCAGTGTCAAGTATGCCATT
TTGCACAAAATTGGCATCGTAAACTGGTTCCCATCATCACATGCCTCTAGTGTTTCTGTAGCTCTGGCTTCATTTCTCTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAACTAATTAATCAGGCTGGACTTTCGCGCACGATTCTCAATGTTGGACCATTCTATCCCAAGCTCATCAGAGAGGTCATTGCTAATCTATCGTCTGATTTTGATGA
TCCAAGCAGTCCAGATTATCAAACAATTCATGTCAGAGGACGAACACTTGTCATCTCTCCCTATGTGATTAATACTTTCTTAGGGCTTACTCCGTCGGAGAATGCTGATT
TACCAACCCACTCAACAGATACCCTGGCATCTGTGTTGACAGGAGGGTCTCTTATAGTTTGGCCACTCACTGGCATTCCTTCTGCTGCACTCAGTGTCAAGTATGCCATT
TTGCACAAAATTGGCATCGTAAACTGGTTCCCATCATCACATGCCTCTAGTGTTTCTGTAGCTCTGGCTTCATTTCTCTTCTAA
Protein sequenceShow/hide protein sequence
MELINQAGLSRTILNVGPFYPKLIREVIANLSSDFDDPSSPDYQTIHVRGRTLVISPYVINTFLGLTPSENADLPTHSTDTLASVLTGGSLIVWPLTGIPSAALSVKYAI
LHKIGIVNWFPSSHASSVSVALASFLF