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CsGy5G013140 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G013140
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionDNA topoisomerase 2-binding protein 1
Genome locationGy14Chr5:16703268..16703906
RNA-Seq ExpressionCsGy5G013140
SyntenyCsGy5G013140
Gene Ontology termsNA
InterPro domainsIPR001357 - BRCT domain
IPR036420 - BRCT domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637272.1 hypothetical protein CSA_021749, partial [Cucumis sativus]5.75e-3598.33Show/hide
Query:  KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVRQ
        KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECV Q
Subjt:  KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVRQ

KAE8637345.1 hypothetical protein CSA_011916, partial [Cucumis sativus]1.95e-3596.67Show/hide
Query:  KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVRQ
        KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTK+EAACKWGKQCITAEWIYECV Q
Subjt:  KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVRQ

KAE8637417.1 hypothetical protein CSA_021603 [Cucumis sativus]1.98e-6198.91Show/hide
Query:  KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVRQVTLRFCCFSIIYVHIHAYPDRILDPLCLYFFS
        KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVRQ TLRFCCFSIIYVHIHAYPDRILDPLCLYFFS
Subjt:  KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVRQVTLRFCCFSIIYVHIHAYPDRILDPLCLYFFS

KAE8637478.1 hypothetical protein CSA_023906, partial [Cucumis sativus]1.77e-5796.55Show/hide
Query:  KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVRQVTLRFCCFSIIYVHIHAYPDRILDPLC
        KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECV QV LRFCCFSIIYVH+HAYPDRILDPLC
Subjt:  KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVRQVTLRFCCFSIIYVHIHAYPDRILDPLC

XP_031745843.1 S-M checkpoint control protein rad4-like [Cucumis sativus]1.74e-3595.08Show/hide
Query:  KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVRQV
        KDRVLLRNLCF LGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECV Q+
Subjt:  KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVRQV

TrEMBL top hitse value%identityAlignment
A0A0A0L359 BRCT domain-containing protein1.45e-3596.72Show/hide
Query:  KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVRQV
        KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECV Q+
Subjt:  KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVRQV

A0A1S3BAL1 DNA topoisomerase 2-binding protein 1 isoform X39.64e-3298.33Show/hide
Query:  KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVRQ
        KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWG QCITAEWIYECVRQ
Subjt:  KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVRQ

A0A1S4DV57 DNA topoisomerase 2-binding protein 1 isoform X19.69e-3298.33Show/hide
Query:  KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVRQ
        KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWG QCITAEWIYECVRQ
Subjt:  KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVRQ

A0A1S4DV59 DNA topoisomerase 2-binding protein 1 isoform X29.69e-3298.33Show/hide
Query:  KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVRQ
        KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWG QCITAEWIYECVRQ
Subjt:  KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVRQ

A0A5A7U8G5 DNA topoisomerase 2-binding protein 1 isoform X29.69e-3298.33Show/hide
Query:  KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVRQ
        KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWG QCITAEWIYECVRQ
Subjt:  KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVRQ

SwissProt top hitse value%identityAlignment
Q5XIY8 PAX-interacting protein 14.3e-0434.33Show/hide
Query:  DRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWI-------YECVRQV
        DR  L+ + ++ GA++   L +  T LICK   G KYE A +W   C+ A+W+       +E +RQ+
Subjt:  DRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWI-------YECVRQV

Q6NZQ4 PAX-interacting protein 11.5e-0435.06Show/hide
Query:  DRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWI-------YECVRQVTL-RFCCFSI
        DR  L+ + ++ GAK+   L +  T LICK   G KYE A +W   C+ A+W+       +E +RQV   R+  F++
Subjt:  DRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWI-------YECVRQVTL-RFCCFSI

Q6ZW49 PAX-interacting protein 18.6e-0535.06Show/hide
Query:  DRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWI-------YECVRQVTL-RFCCFSI
        DR  L+ + ++ GAK+   L +  T LICK   G KYE A +W   C+ A+W+       +E +RQ+   R+  FS+
Subjt:  DRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWI-------YECVRQVTL-RFCCFSI

Q800K6 DNA topoisomerase 2-binding protein 1-A4.3e-0437.31Show/hide
Query:  DRVLLRNLCFVLGAKFVEKLTKKV---------THLICKFTDGTKYEAACKWGKQCITAEWIYECVR
        +R  L  L  +LGAK  E   +K          THL+ K  +G+KYEAA KW    +T  W+ +C R
Subjt:  DRVLLRNLCFVLGAKFVEKLTKKV---------THLICKFTDGTKYEAACKWGKQCITAEWIYECVR

Arabidopsis top hitse value%identityAlignment
AT1G67180.1 zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein1.0e-0535.59Show/hide
Query:  DRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVRQ
        DR  L  L    GA +V  +++ +THL+C   +G KY+ A K+G   +   W+ ECV++
Subjt:  DRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVRQ

AT1G77320.1 transcription coactivators5.0e-1663.33Show/hide
Query:  KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVRQ
        K+  LLRNL  VLGA FVE+LT+KVTHLIC F  G KY  A KWG   +T +W+YECVRQ
Subjt:  KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVRQ

AT1G77320.2 transcription coactivators5.0e-1663.33Show/hide
Query:  KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVRQ
        K+  LLRNL  VLGA FVE+LT+KVTHLIC F  G KY  A KWG   +T +W+YECVRQ
Subjt:  KDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTTTCTGGGATACCAATGGGCACATTCTCTATTCTCCTCTTCCTTGTTGTGTCCCTTTGCCTGGATTTGAAAACATACGGTTTTGTGTTTCACAATATGATGAT
AAAAGACAGAGTATTGTTAAGAAATCTGTGTTTTGTACTTGGGGCCAAGTTTGTGGAGAAGCTGACAAAGAAGGTAACCCATCTAATATGCAAGTTCACGGATGGGACAA
AGTATGAGGCTGCTTGTAAATGGGGGAAACAATGCATTACAGCTGAATGGATATATGAGTGTGTCAGACAAGTAACTTTGCGATTTTGTTGCTTTTCAATTATATATGTT
CATATACATGCATATCCTGATAGAATTCTAGACCCATTGTGTTTATATTTCTTCTCTTAG
mRNA sequenceShow/hide mRNA sequence
AAGGATGGATGTTTCTGGGATACCAATGGGCACATTCTCTATTCTCCTCTTCCTTGTTGTGTCCCTTTGCCTGGATTTGAAAACATACGGTTTTGTGTTTCACAATATGA
TGATAAAAGACAGAGTATTGTTAAGAAATCTGTGTTTTGTACTTGGGGCCAAGTTTGTGGAGAAGCTGACAAAGAAGGTAACCCATCTAATATGCAAGTTCACGGATGGG
ACAAAGTATGAGGCTGCTTGTAAATGGGGGAAACAATGCATTACAGCTGAATGGATATATGAGTGTGTCAGACAAGTAACTTTGCGATTTTGTTGCTTTTCAATTATATA
TGTTCATATACATGCATATCCTGATAGAATTCTAGACCCATTGTGTTTATATTTCTTCTCTTAGATATGGAATGATTTTGTTTGAAAACAAAATTTTCAGAGAAAGATTG
TTTCTCTTGATTTGTATCGCCCAAAAGAAGTTACAGCTCAAGACAGAGTGACATGCTTGTGCACTGTCAGCCAATTTCCTACTCAAGCTGCCCCAATGATAGCCAATGAA
AGCGTATCCCAGTTTCCTATCCATTCTGCCATTCTGAGAGACCAATCAGCTGGAACTAACAGTAGCTCTATAGGAGCAGCTGAACGAAT
Protein sequenceShow/hide protein sequence
MDVSGIPMGTFSILLFLVVSLCLDLKTYGFVFHNMMIKDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVRQVTLRFCCFSIIYV
HIHAYPDRILDPLCLYFFS