; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy5G013150 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G013150
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptioncarbon catabolite repressor protein 4 homolog 4
Genome locationGy14Chr5:16705082..16716785
RNA-Seq ExpressionCsGy5G013150
SyntenyCsGy5G013150
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637330.1 hypothetical protein CSA_000001 [Cucumis sativus]5.89e-4294.44Show/hide
Query:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDK
        M AFKL QPFHHVVILANTHL WDPEWADVKLAQAKYLLSRLARFKSLVAE FECTPSVLLAGDFNSTPGDK
Subjt:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDK

KAE8648327.1 hypothetical protein Csa_023093 [Cucumis sativus]1.28e-75100Show/hide
Query:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVHIVLYTYVCNILKMGPWAYMTALVKHK
        MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVHIVLYTYVCNILKMGPWAYMTALVKHK
Subjt:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVHIVLYTYVCNILKMGPWAYMTALVKHK

Query:  RSLRLGL
        RSLRLGL
Subjt:  RSLRLGL

XP_031741589.1 carbon catabolite repressor protein 4 homolog 4-like [Cucumis sativus]5.37e-7197.2Show/hide
Query:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDK---VHIVLYTYVCNILKMGPWAYMTALV
        MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDK   VHIVLYTYVCNILKMGPWAYMTALV
Subjt:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDK---VHIVLYTYVCNILKMGPWAYMTALV

Query:  KHKRSLR
        KHKRSLR
Subjt:  KHKRSLR

XP_031745861.1 carbon catabolite repressor protein 4 homolog 4-like isoform X1 [Cucumis sativus]1.69e-5595.51Show/hide
Query:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVHIVLYTYVCNILKMGP
        M AFKL QPFHHVVILANTHL WDPEWADVKLAQAKYLLSRLARFKSLVAE FECTPSVLLAGDFNSTPGDKVHIVLYTYVCNILKMGP
Subjt:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVHIVLYTYVCNILKMGP

XP_031745863.1 carbon catabolite repressor protein 4 homolog 4-like isoform X3 [Cucumis sativus]1.19e-5595.51Show/hide
Query:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVHIVLYTYVCNILKMGP
        M AFKL QPFHHVVILANTHL WDPEWADVKLAQAKYLLSRLARFKSLVAE FECTPSVLLAGDFNSTPGDKVHIVLYTYVCNILKMGP
Subjt:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVHIVLYTYVCNILKMGP

TrEMBL top hitse value%identityAlignment
A0A0A0L0V7 Endo/exonuclease/phosphatase domain-containing protein1.02e-4194.59Show/hide
Query:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVH
        M AFKLEQPFHHVVI+ANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAE FECTPSVLLAGDFNSTPGDKV+
Subjt:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVH

A0A1S3B9X8 carbon catabolite repressor protein 4 homolog 41.16e-4193.24Show/hide
Query:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVH
        M AFKLEQPFHHVVI+ANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAE FECTPS+LLAGDFNSTPGDKV+
Subjt:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVH

A0A5A7UEY1 Carbon catabolite repressor protein 4-like protein 47.07e-4293.24Show/hide
Query:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVH
        M AFKLEQPFHHVVI+ANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAE FECTPS+LLAGDFNSTPGDKV+
Subjt:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVH

A0A5D3BPZ3 Carbon catabolite repressor protein 4-like protein 47.07e-4293.24Show/hide
Query:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVH
        M AFKLEQPFHHVVI+ANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAE FECTPS+LLAGDFNSTPGDKV+
Subjt:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVH

A0A6J1IPN5 carbon catabolite repressor protein 4 homolog 4 isoform X22.09e-3986.49Show/hide
Query:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVH
        M AF+L++PFHHVVI+ANTHLYWDPEWADVKLAQAKYLLSRLARFK+LV+E FECTPS+LLAGDFNSTPGDKV+
Subjt:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVH

SwissProt top hitse value%identityAlignment
A8MS41 Carbon catabolite repressor protein 4 homolog 42.7e-2872.73Show/hide
Query:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVHIVL
        M AF++ +PF H+VI+ANTHLYWDPE ADVKLAQAKYLLSRLA+FK+L+++ FECTPS+LLAGDFNS PGD V+  L
Subjt:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVHIVL

B7XK66 Probable CCR4-Not complex 3'-5'-exoribonuclease subunit Ccr44.2e-0530.85Show/hide
Query:  VVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVHIVLYTYVCNILKMGPWAY--MTALVKHKRSLR
        ++I+AN HLYW+PE+ D+K+ Q    L  +   K    E ++    ++L GDFNS     V+  +           PW Y  +   V H  +LR
Subjt:  VVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVHIVLYTYVCNILKMGPWAY--MTALVKHKRSLR

C4V7I7 Probable CCR4-Not complex 3'-5'-exoribonuclease subunit Ccr49.9e-0742.62Show/hide
Query:  VILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVH
        +I+ N HLYWDPE+ D+K  QA  LL  L +    V++ ++  PS++L GDFNS     V+
Subjt:  VILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVH

Q8SU52 Probable CCR4-Not complex 3'-5'-exoribonuclease subunit Ccr42.9e-0633.73Show/hide
Query:  LEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVHIVLYTYVCNILKMG
        LE+P    V++ NTH++WDP++ D+KL Q   L+  + R  S           +LL GDFNS     V+  + T V +    G
Subjt:  LEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVHIVLYTYVCNILKMG

Q9ULM6 CCR4-NOT transcription complex subunit 65.5e-0539.13Show/hide
Query:  VVILANTHLYWDPEWADVKLAQAKYLLSRL--------ARFKSLVAENFECTPSVLLAGDFNSTPGDKV
        ++++AN H++WDPE++DVKL Q    LS +           KS V   F   P VL A D NS P   V
Subjt:  VVILANTHLYWDPEWADVKLAQAKYLLSRL--------ARFKSLVAENFECTPSVLLAGDFNSTPGDKV

Arabidopsis top hitse value%identityAlignment
AT1G31500.1 DNAse I-like superfamily protein1.9e-2972.73Show/hide
Query:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVHIVL
        M AF++ +PF H+VI+ANTHLYWDPE ADVKLAQAKYLLSRLA+FK+L+++ FECTPS+LLAGDFNS PGD V+  L
Subjt:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVHIVL

AT1G31500.2 DNAse I-like superfamily protein1.9e-2972.73Show/hide
Query:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVHIVL
        M AF++ +PF H+VI+ANTHLYWDPE ADVKLAQAKYLLSRLA+FK+L+++ FECTPS+LLAGDFNS PGD V+  L
Subjt:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVHIVL

AT1G31500.3 DNAse I-like superfamily protein3.3e-2975.34Show/hide
Query:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKV
        M AF++ +PF H+VI+ANTHLYWDPE ADVKLAQAKYLLSRLA+FK+L+++ FECTPS+LLAGDFNS PGD V
Subjt:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKV

AT1G31500.4 DNAse I-like superfamily protein1.9e-2972.73Show/hide
Query:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVHIVL
        M AF++ +PF H+VI+ANTHLYWDPE ADVKLAQAKYLLSRLA+FK+L+++ FECTPS+LLAGDFNS PGD V+  L
Subjt:  MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVHIVL

AT1G31530.1 DNAse I-like superfamily protein1.3e-1452.11Show/hide
Query:  MDAFKLEQPFHHVVILANTHLY--WDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTP
        M AFK+ +PF+HVVI+A++HL       W D+KLAQ K L++ LA FK +++    C+PSV+LAGDFNS P
Subjt:  MDAFKLEQPFHHVVILANTHLY--WDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCTTTCAAACTTGAGCAGCCTTTTCATCATGTTGTAATTCTAGCCAACACCCATCTTTATTGGGATCCAGAATGGGCTGATGTGAAGCTCGCTCAGGCT
AAGTATCTTTTATCACGCCTAGCTCGATTCAAATCTTTAGTTGCTGAAAATTTTGAATGCACACCCTCAGTACTTTTGGCTGGCGATTTCAATTCAACCCCAGGA
GATAAGGTACACATTGTGTTATACACTTATGTATGTAATATACTAAAGATGGGACCGTGGGCATATATGACGGCTTTAGTGAAACACAAACGGAGTCTCAGGTTG
GGCCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGCTTTCAAACTTGAGCAGCCTTTTCATCATGTTGTAATTCTAGCCAACACCCATCTTTATTGGGATCCAGAATGGGCTGATGTGAAGCTCGCTCAGGCT
AAGTATCTTTTATCACGCCTAGCTCGATTCAAATCTTTAGTTGCTGAAAATTTTGAATGCACACCCTCAGTACTTTTGGCTGGCGATTTCAATTCAACCCCAGGA
GATAAGGTACACATTGTGTTATACACTTATGTATGTAATATACTAAAGATGGGACCGTGGGCATATATGACGGCTTTAGTGAAACACAAACGGAGTCTCAGGTTG
GGCCTATGAGATAATGTTGTCCATTAGTGGATGAGTTTCTCAAAAGCAGCGCCATGATGCCCAAACTTTATGCGTGTGCATGTCTGTCTCATGAGTTTCAAGCAC
TTGGCCATTTTTCTACAAATAGCTACATTCTTCCTAACGATATTAAACTGAACGTCGTGGGGCGCTGCATTATATTGTAAGGCTGAAGCATAATTAGCTTCATAT
CCTTTCTCGAATGCCTCAACTTGAATTGGTTGATGTTGCATGACTTCAAATTGACTTAATTAGCTCCAAAATGATTTTAGCGCCAAATTTCATCTCTTAATTGCT
TAAATCATATAACACAATCAAACAAGATCTTAAAATCACGGAACAAACCTAAATTAAGTGGAAATATATAGAATATTTCCTAAGCTATCAAATTGGTTCTTTTCA
AACCTAACAAAGCATCCAGCAAATTGATTACCACATTAATGGCCC
Protein sequenceShow/hide protein sequence
MDAFKLEQPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAENFECTPSVLLAGDFNSTPGDKVHIVLYTYVCNILKMGPWAYMTALVKHKRSLRL
GL