CuGenDBv2

Gene ID	CsGy5G013470
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	ATP synthase subunit alpha
Genome location	Gy14Chr5:17386291..17387213
RNA-Seq Expression	CsGy5G013470
Synteny	CsGy5G013470
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0005739 - mitochondrion (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0031090 - organelle membrane (cellular component) GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component) GO:0005524 - ATP binding (molecular function) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
InterPro domains	IPR004100 - ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain IPR023366 - ATP synthase subunit alpha, N-terminal domain-like superfamily IPR036121 - ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AFY08517.1 ATPase subunit 1, partial [Eleusine coracana]

1.83e-51

82.24

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Query:  VEFSPGVAELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIKEGDLVKRTRSIVDVL
        +EFSPG AELTTFLEGRITNF TS++VDEMGRV SVGDGI+RVYGLKEIQA E+VEFS+GVKGIALNLENENVGI++FGSDTAIKEGDLVKRT SIVDV 
Subjt:  VEFSPGVAELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIKEGDLVKRTRSIVDVL

Query:  RERLCLG
          +  LG
Subjt:  RERLCLG

KAE8648350.1 hypothetical protein Csa_023147 [Cucumis sativus]

1.66e-111

100

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Query:  MGLEYLDRRVESDILTGRPRRNRIVEFSPGVAELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGII
        MGLEYLDRRVESDILTGRPRRNRIVEFSPGVAELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGII
Subjt:  MGLEYLDRRVESDILTGRPRRNRIVEFSPGVAELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGII

Query:  IFGSDTAIKEGDLVKRTRSIVDVLRERLCLGVWSTPWKYLLMEEGSKRSSAKTCRSESPWDY
        IFGSDTAIKEGDLVKRTRSIVDVLRERLCLGVWSTPWKYLLMEEGSKRSSAKTCRSESPWDY
Subjt:  IFGSDTAIKEGDLVKRTRSIVDVLRERLCLGVWSTPWKYLLMEEGSKRSSAKTCRSESPWDY

TYJ99657.1 putative ATP synthase F1 subunit 1 [Cucumis melo var. makuwa]

7.78e-51

82.24

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Query:  VEFSPGVAELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIKEGDLVKRTRSIVDVL
        +EFSPG AELTTFLEGRITNF TS++VDEMGRV SVGDGI+RVYGLKEIQA E+VEFS+GVKGIALNLENENVGI++FGSDTAIKEGDLVKRT SIVDV 
Subjt:  VEFSPGVAELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIKEGDLVKRTRSIVDVL

Query:  RERLCLG
          +  LG
Subjt:  RERLCLG

XP_011656203.2 LOW QUALITY PROTEIN: uncharacterized protein LOC105435664 [Cucumis sativus]

2.71e-65

92.62

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Query:  VESDILTGRPRRNRIVEFSPGVAELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIK
        + SDILTGRPRRNRIVEFSPGVAELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIK
Subjt:  VESDILTGRPRRNRIVEFSPGVAELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIK

Query:  EGDLVKRTRSIVDVLRERLCLG
        EGDLVKRTRSIVDV   +   G
Subjt:  EGDLVKRTRSIVDVLRERLCLG

YP_004849346.1 ATPase subunit 1 [Cucumis sativus]

8.03e-51

85.98

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Query:  VEFSPGVAELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIKEGDLVKRTRSIVDVL
        +EFSPG AELTTFLEGRITNFNTS QVDEMGRVFSVGDGISRVYGLKEIQA E+VEFS+GVKGIALNLENENVGI++FGSDTAIKEGDLVKRT SIVDV 
Subjt:  VEFSPGVAELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIKEGDLVKRTRSIVDVL

Query:  RERLCLG
          +  LG
Subjt:  RERLCLG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KT56 ATP-synt_ab_N domain-containing protein

1.33e-69

97.25

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Query:  MGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIKEGDLVKRTRSIVDVLRERLCLGVWSTPWKYLLMEEGSKRSSAKT
        MGRVFSVGDGISRVYGLKEIQA E+VEFS+GVKGIALNLENENVGIIIFGSDTAIKEGDLVKRTRSIVDVLRERLCLGVWSTPWKYLLMEEGSKRSSAKT
Subjt:  MGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIKEGDLVKRTRSIVDVLRERLCLGVWSTPWKYLLMEEGSKRSSAKT

Query:  CRSESPWDY
        CRSESPWDY
Subjt:  CRSESPWDY

A0A5D3BKJ9 Putative ATP synthase F1 subunit 1 (Mitochondrion)

3.77e-51

82.24

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Query:  VEFSPGVAELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIKEGDLVKRTRSIVDVL
        +EFSPG AELTTFLEGRITNF TS++VDEMGRV SVGDGI+RVYGLKEIQA E+VEFS+GVKGIALNLENENVGI++FGSDTAIKEGDLVKRT SIVDV 
Subjt:  VEFSPGVAELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIKEGDLVKRTRSIVDVL

Query:  RERLCLG
          +  LG
Subjt:  RERLCLG

G3EIZ8 ATP synthase subunit alpha

3.89e-51

85.98

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Query:  VEFSPGVAELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIKEGDLVKRTRSIVDVL
        +EFSPG AELTTFLEGRITNFNTS QVDEMGRVFSVGDGISRVYGLKEIQA E+VEFS+GVKGIALNLENENVGI++FGSDTAIKEGDLVKRT SIVDV 
Subjt:  VEFSPGVAELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIKEGDLVKRTRSIVDVL

Query:  RERLCLG
          +  LG
Subjt:  RERLCLG

G3EU37 Putative ATP synthase F1 subunit 1

7.42e-49

82.24

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Query:  VEFSPGVAELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIKEGDLVKRTRSIVDVL
        +EFSPG AELTTFLEGRITNF TS++VDEMGRV SVGDGI+RVYGLKEIQA E+VEFS+GVKGIALNLENENVGI++FGSDTAIKEGDLVKRT SIVDV 
Subjt:  VEFSPGVAELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIKEGDLVKRTRSIVDVL

Query:  RERLCLG
          +  LG
Subjt:  RERLCLG

K9N0G2 ATPase subunit 1 (Fragment)

8.85e-52

82.24

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Query:  VEFSPGVAELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIKEGDLVKRTRSIVDVL
        +EFSPG AELTTFLEGRITNF TS++VDEMGRV SVGDGI+RVYGLKEIQA E+VEFS+GVKGIALNLENENVGI++FGSDTAIKEGDLVKRT SIVDV 
Subjt:  VEFSPGVAELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIKEGDLVKRTRSIVDVL

Query:  RERLCLG
          +  LG
Subjt:  RERLCLG

SwissProt top hits

e value

%identity

Alignment

P05492 ATP synthase subunit alpha, mitochondrial

5.1e-39

76.64

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Query:  VEFSPGVAELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIKEGDLVKRTRSIVDVL
        +EFSP  AELTT LE RITNF T+ QVDE+GRV SVGDGI+RVYGL EIQA E+VEF++GVKGIALNLENENVGI++FGSDTAIKEGDLVKRT SIVDV 
Subjt:  VEFSPGVAELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIKEGDLVKRTRSIVDVL

Query:  RERLCLG
          +  LG
Subjt:  RERLCLG

P0C520 ATP synthase subunit alpha, mitochondrial

1.1e-38

75.7

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Query:  VEFSPGVAELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIKEGDLVKRTRSIVDVL
        +EFSP  AELTT LE R+TNF T+ QVDE+GRV SVGDGI+RVYGL EIQA E+VEF++GVKGIALNLENENVGI++FGSDTAIKEGDLVKRT SIVDV 
Subjt:  VEFSPGVAELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIKEGDLVKRTRSIVDVL

Query:  RERLCLG
          +  LG
Subjt:  RERLCLG

P0C521 ATP synthase subunit alpha, mitochondrial

1.1e-38

75.7

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Query:  VEFSPGVAELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIKEGDLVKRTRSIVDVL
        +EFSP  AELTT LE R+TNF T+ QVDE+GRV SVGDGI+RVYGL EIQA E+VEF++GVKGIALNLENENVGI++FGSDTAIKEGDLVKRT SIVDV 
Subjt:  VEFSPGVAELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIKEGDLVKRTRSIVDVL

Query:  RERLCLG
          +  LG
Subjt:  RERLCLG

P0C522 ATP synthase subunit alpha, mitochondrial

1.1e-38

75.7

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Query:  VEFSPGVAELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIKEGDLVKRTRSIVDVL
        +EFSP  AELTT LE R+TNF T+ QVDE+GRV SVGDGI+RVYGL EIQA E+VEF++GVKGIALNLENENVGI++FGSDTAIKEGDLVKRT SIVDV 
Subjt:  VEFSPGVAELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIKEGDLVKRTRSIVDVL

Query:  RERLCLG
          +  LG
Subjt:  RERLCLG

P12862 ATP synthase subunit alpha, mitochondrial

1.1e-38

75.7

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Query:  VEFSPGVAELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIKEGDLVKRTRSIVDVL
        +EFSP  AELTT LE R+TNF T+ QVDE+GRV SVGDGI+RVYGL EIQA E+VEF++GVKGIALNLENENVGI++FGSDTAIKEGDLVKRT SIVDV 
Subjt:  VEFSPGVAELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIKEGDLVKRTRSIVDVL

Query:  RERLCLG
          +  LG
Subjt:  RERLCLG

Arabidopsis top hits

e value

%identity

Alignment

AT2G07698.1 ATPase, F1 complex, alpha subunit protein

1.5e-33

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Query:  AELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIKEGDLVKRTRSIVDVLRERLCLG
        AELT   E RI NF  + QVDE+GRV SVGDGI++VYGL EIQA E+V F+NGVKG+ALNLENENVGI++FG DTAIKEGDLVKRT SIVDV   +  LG
Subjt:  AELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIKEGDLVKRTRSIVDVLRERLCLG

ATCG00120.1 ATP synthase subunit alpha

5.1e-18

42.42

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Query:  ELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIKEGDLVKRTRSIVDVLRERLCLG
        E++  +  RI  +N  + +   G V  VGDGI+R+YGL E+ A E+VEF  G  GIALNLE+ NVG+++ G    I+EG  VK T  I  +      LG
Subjt:  ELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIKEGDLVKRTRSIVDVLRERLCLG

ATMG01190.1 ATP synthase subunit 1

1.6e-35

69.16

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Query:  VEFSPGVAELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIKEGDLVKRTRSIVDVL
        +E SP  AELT   E RI NF  + QVDE+GRV SVGDGI++VYGL EIQA E+V F+NGVKG+ALNLENENVGI++FG DTAIKEGDLVKRT SIVDV 
Subjt:  VEFSPGVAELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIKEGDLVKRTRSIVDVL

Query:  RERLCLG
          +  LG
Subjt:  RERLCLG

Sequences

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CDS sequence

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ATGGGGTTAGAATATCTCGACCGAAGAGTTGAAAGCGACATTCTCACTGGACGCCCAAGAAGAAATCGAATCGTGGAATTCTCTCCCGGAGTAGCGGAACTAACAACTTT
CTTAGAAGGTAGAATTACGAACTTCAACACTTCTATTCAAGTGGATGAGATGGGTCGAGTTTTTTCTGTAGGAGATGGGATTTCTCGAGTTTATGGATTGAAGGAGATTC
AAGCTAGGGAAATTGTGGAATTTTCCAACGGTGTCAAAGGAATAGCCTTAAATCTTGAGAATGAGAATGTAGGTATTATTATCTTTGGTAGTGATACCGCTATTAAAGAA
GGAGATCTTGTCAAGCGCACCAGATCGATTGTGGATGTTCTGCGGGAAAGGCTATGTTTGGGCGTGTGGTCAACGCCTTGGAAGTACCTATTGATGGAAGAGGGTTCTAA
GCGATCATCAGCGAAAACGTGTCGAAGTGAAAGCCCCTGGGATTATTGA

mRNA sequence

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Protein sequence

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MGLEYLDRRVESDILTGRPRRNRIVEFSPGVAELTTFLEGRITNFNTSIQVDEMGRVFSVGDGISRVYGLKEIQAREIVEFSNGVKGIALNLENENVGIIIFGSDTAIKE
GDLVKRTRSIVDVLRERLCLGVWSTPWKYLLMEEGSKRSSAKTCRSESPWDY

CsGy5G013470 (gene) of Cucumber (Gy14) v2.1 genome