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CsGy5G013510 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G013510
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionSPARK domain-containing protein
Genome locationGy14Chr5:17476352..17479625
RNA-Seq ExpressionCsGy5G013510
SyntenyCsGy5G013510
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR003121 - SWIB/MDM2 domain
IPR036885 - SWIB/MDM2 domain superfamily
IPR040376 - At4g28100-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN51061.2 hypothetical protein Csa_023123 [Cucumis sativus]3.87e-47100Show/hide
Query:  MKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQ
        MKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQ
Subjt:  MKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQ

TYK28481.1 putative GPI-anchored protein [Cucumis melo var. makuwa]2.12e-45100Show/hide
Query:  MKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQ
        MKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQ
Subjt:  MKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQ

XP_008453468.1 PREDICTED: uncharacterized GPI-anchored protein At4g28100 [Cucumis melo]2.12e-45100Show/hide
Query:  MKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQ
        MKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQ
Subjt:  MKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQ

XP_011649105.2 uncharacterized GPI-anchored protein At4g28100 [Cucumis sativus]1.50e-4588.24Show/hide
Query:  MKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQDPSNKRRIICEEK
        MKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQ   NK+  +   K
Subjt:  MKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQDPSNKRRIICEEK

XP_023005177.1 uncharacterized GPI-anchored protein At4g28100-like [Cucurbita maxima]3.34e-4497.22Show/hide
Query:  MKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQ
        MKPNETCDVVYCYCGIRLHPLSCPEAFS+NQNGILEG+RNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQ
Subjt:  MKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQ

TrEMBL top hitse value%identityAlignment
A0A0A0LPW7 Uncharacterized protein1.17e-4788.24Show/hide
Query:  MKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQDPSNKRRIICEEK
        MKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQ   NK+  +   K
Subjt:  MKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQDPSNKRRIICEEK

A0A1S3BWB4 uncharacterized GPI-anchored protein At4g281001.03e-45100Show/hide
Query:  MKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQ
        MKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQ
Subjt:  MKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQ

A0A5A7UTR5 Putative GPI-anchored protein1.03e-45100Show/hide
Query:  MKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQ
        MKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQ
Subjt:  MKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQ

A0A5D3DY25 Putative GPI-anchored protein1.03e-45100Show/hide
Query:  MKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQ
        MKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQ
Subjt:  MKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQ

A0A6J1KSF1 uncharacterized GPI-anchored protein At4g28100-like1.62e-4497.22Show/hide
Query:  MKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQ
        MKPNETCDVVYCYCGIRLHPLSCPEAFS+NQNGILEG+RNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQ
Subjt:  MKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQ

SwissProt top hitse value%identityAlignment
Q9SUC9 Uncharacterized GPI-anchored protein At4g281008.0e-0739.19Show/hide
Query:  KPNETCDVVYCYCGIRLH---PLSCPEAFSLNQNGILEGNRN--VKRLERNCLSSGNVNGFPGLGGCSKCLKSL
        +PN +CD + C+CGIRLH    LSCP AF+++ +G         VK LE+ C +S          GC++CL +L
Subjt:  KPNETCDVVYCYCGIRLH---PLSCPEAFSLNQNGILEGNRN--VKRLERNCLSSGNVNGFPGLGGCSKCLKSL

Arabidopsis top hitse value%identityAlignment
AT1G49520.1 SWIB complex BAF60b domain-containing protein5.0e-0452.78Show/hide
Query:  QDPSNKRRIICEEKLKELFDVDSFNGLTVLKLLTTH
        QDPS+KR IIC+E L+ LF V+S N   + K L  H
Subjt:  QDPSNKRRIICEEKLKELFDVDSFNGLTVLKLLTTH

AT3G18050.1 unknown protein2.4e-2264.38Show/hide
Query:  KPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSS--GNVNGFPGLGGCSKCLKSLYQ
        +PNETCDVVYCYCGIRLHPLSC EAF +N  G L G+  V RLE +CLS    N +GF  L GC+KCL SLY+
Subjt:  KPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSS--GNVNGFPGLGGCSKCLKSLYQ

AT3G19080.1 SWIB complex BAF60b domain-containing protein9.3e-1174.36Show/hide
Query:  QDPSNKRRIICEEKLKELFDVDSFNGLTVLKLLTTHFIK
        QDPS+KRR+IC+EKLKELF+VDSF   +V KLLT HFIK
Subjt:  QDPSNKRRIICEEKLKELFDVDSFNGLTVLKLLTTHFIK

AT4G22360.1 SWIB complex BAF60b domain-containing protein3.8e-0440.91Show/hide
Query:  KSLYQDPSNKRRIICEEKLKELFDVDSFNGLTVLKLLTTHFIKM
        K+  QDPSNKR+IIC++ L+ +F+ D  +   + KLL  H + +
Subjt:  KSLYQDPSNKRRIICEEKLKELFDVDSFNGLTVLKLLTTHFIKM

AT4G28100.1 unknown protein5.7e-0839.19Show/hide
Query:  KPNETCDVVYCYCGIRLH---PLSCPEAFSLNQNGILEGNRN--VKRLERNCLSSGNVNGFPGLGGCSKCLKSL
        +PN +CD + C+CGIRLH    LSCP AF+++ +G         VK LE+ C +S          GC++CL +L
Subjt:  KPNETCDVVYCYCGIRLH---PLSCPEAFSLNQNGILEGNRN--VKRLERNCLSSGNVNGFPGLGGCSKCLKSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCCTAACGAGACTTGTGATGTGGTTTATTGTTATTGTGGGATCAGATTGCATCCTTTGAGCTGCCCTGAAGCGTTTTCACTGAACCAGAATGGTATTCTTGAAGG
AAATAGAAATGTGAAGAGATTGGAGAGAAATTGCTTGAGTAGTGGCAATGTCAATGGATTTCCAGGCCTTGGTGGCTGTTCTAAATGCTTGAAAAGTCTTTATCAGGACC
CTTCTAACAAAAGGAGAATAATTTGTGAGGAGAAGTTAAAAGAACTTTTTGATGTTGATTCCTTTAATGGACTCACTGTTTTGAAACTCCTAACCACACATTTTATAAAG
ATGAAATAG
mRNA sequenceShow/hide mRNA sequence
CGCGCACACCCTATTTCATTTTAGATTTTCTTTTCCGTTTTTCCTTCTGCCCTAGCGCAATCGCCCCTCCTCATCTTTGTTCGTGTCTACGACCACCGCTCCAACCTCAC
GTCGGCAGTCTTTCTGAATCGCCGTCGTCCCGTCAAGGTTGAAGTCGAAGAGCCAGTTCGCGTCGCGGGTCGTTTTCGCCGTCGTCCCCATTTCTTCAATTTCCTCCCCT
CATTCTCATTCTCTTCACCAATGTCTTCAATCCCACAAATCTTTCTCCTCTTCTCTCTTCTTTTCTCTCTTTTCCCTTCCTTTTTCTCACTTCCCCATCCAGACCCACTT
ACAATCCGCCCATTTCAAGTGAACCAGTCCCCACCGGCTACTATTCCGGCGTTCCCATAACAATCCGATGTTCAGGGCTGCCCGTTAGACCTCCCCGACGAGCTTTTCCA
TGGGATTAAGACGGCTTGTGGTCCTTCAAAAGGGGGTGTCTCCGGGCAGCTCCATCGTAGCCGGTGCTGTCCGGTTTTGGCTGCGTGGCTTTACGCTGCTTACTCAGCCA
CCGCATTGCAGAGGGCCGGTCGAGGTGGGGTTGTTCCCGGTCACACAGCGCCGTCGTATGACCTACCCTTACTGCCCGATGACTCCGAAACTTGCGTCAGTAACTTGGAT
CAAGCTTTGAATCAAAGGGGTATTGAGTTAATGAAGCCTAACGAGACTTGTGATGTGGTTTATTGTTATTGTGGGATCAGATTGCATCCTTTGAGCTGCCCTGAAGCGTT
TTCACTGAACCAGAATGGTATTCTTGAAGGAAATAGAAATGTGAAGAGATTGGAGAGAAATTGCTTGAGTAGTGGCAATGTCAATGGATTTCCAGGCCTTGGTGGCTGTT
CTAAATGCTTGAAAAGTCTTTATCAGGACCCTTCTAACAAAAGGAGAATAATTTGTGAGGAGAAGTTAAAAGAACTTTTTGATGTTGATTCCTTTAATGGACTCACTGTT
TTGAAACTCCTAACCACACATTTTATAAAGATGAAATAGTTCGAAAACTTCAAAGAGCATGCTTAAAGAATCCTGTTAAGGCTGCAACCAACACAGTCGAATATGATAAT
TTCCAGACTCTGGCCTTATGTGTTTGAAGCTATTTTCTGATCGATCCATTGTAGTAATGAAGCTACGAAGCAAGTGATTGATGTTTGGTTAGTGACAAGATTTATTGTAA
TTTTGTTATTCATGACAATATAACCTTGTTGTATTTAGTTTCTTTGTAAAAATATATTACCCACGTTCAATTTCTATTTTGCTTGTATTTGTCCCTTCGGAAAATTTCGA
TAGATTTTCTACACTTAGTTTCTTTGTAAAAATGTTATCTATGAAATCTAATGTAAAGCCTATTTCATTATGTA
Protein sequenceShow/hide protein sequence
MKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQDPSNKRRIICEEKLKELFDVDSFNGLTVLKLLTTHFIK
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