; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy5G014380 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G014380
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptiontransmembrane protein 50A
Genome locationGy14Chr5:19750059..19760461
RNA-Seq ExpressionCsGy5G014380
SyntenyCsGy5G014380
Gene Ontology termsGO:0032511 - late endosome to vacuole transport via multivesicular body sorting pathway (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007919 - Uncharacterised protein family UPF0220


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140320.1 transmembrane protein 50A [Cucumis sativus]1.07e-94100Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD

Query:  SVVKAGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        SVVKAGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  SVVKAGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

XP_008460472.1 PREDICTED: transmembrane protein 50A [Cucumis melo]4.34e-9499.26Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD

Query:  SVVKAGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        SVVK GPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  SVVKAGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

XP_022141734.1 transmembrane protein 50A [Momordica charantia]3.57e-9397.78Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSV VSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD

Query:  SVVKAGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        S+VK GPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  SVVKAGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

XP_022993057.1 transmembrane protein 50A [Cucurbita maxima]1.25e-9398.52Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVR+EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD

Query:  SVVKAGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        SVVK GPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  SVVKAGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

XP_038874577.1 transmembrane protein 50A [Benincasa hispida]6.17e-9498.52Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSF+HYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD

Query:  SVVKAGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        SVVK GPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  SVVKAGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

TrEMBL top hitse value%identityAlignment
A0A1S3CCJ8 transmembrane protein 50A2.10e-9499.26Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD

Query:  SVVKAGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        SVVK GPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  SVVKAGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

A0A6J1CJN8 transmembrane protein 50A1.73e-9397.78Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSV VSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD

Query:  SVVKAGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        S+VK GPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  SVVKAGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

A0A6J1FCW9 transmembrane protein 50A-like4.96e-9397.78Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFAS AALMFNCVR+EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD

Query:  SVVKAGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        SVVK GPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  SVVKAGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

A0A6J1JRP9 transmembrane protein 50A6.03e-9498.52Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
        MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVR+EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD

Query:  SVVKAGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        SVVK GPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Subjt:  SVVKAGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

D6BRE9 Transmembrane protein 50a, putative1.66e-9194.07Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
        MDLAELW+IFGPGVAGAVFG GWWFW+DAVVCSSV VSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD

Query:  SVVKAGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        S+VK GPSVWTG AGVLQCVFVL+SGLIYWTSHSE
Subjt:  SVVKAGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

SwissProt top hitse value%identityAlignment
A9CAZ8 Transmembrane protein 50B2.5e-0729.29Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVH--YLPGIFASFAALMFNCVRKEDIDYSPYEE---GEWRLKLWLFFAYVVSFVSLAASVG
        +D +E  +     VAG +F  GWW  +DA V         H  +  G+F++ A  M N V    +    YE    G    ++WLF  +++ F SL AS+ 
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVH--YLPGIFASFAALMFNCVRKEDIDYSPYEE---GEWRLKLWLFFAYVVSFVSLAASVG

Query:  LLIQDSVVKAGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        +L   + V     V+ G+A   Q   +  S LIY    +E
Subjt:  LLIQDSVVKAGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

O95807 Transmembrane protein 50A7.1e-1031.75Show/hide
Query:  AGAVFGAGWWFWVDAVVCSSVAVSFVH--YLPGIFASFAALMFNCVRKEDIDYSPYEE---GEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKAGPSV
        AG +F  GWW  +DA V       F H  +  G+ A+ A LM N V    +    Y E   G+   ++WLF  ++++F SL AS+ +L    V K    V
Subjt:  AGAVFGAGWWFWVDAVVCSSVAVSFVH--YLPGIFASFAALMFNCVRKEDIDYSPYEE---GEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKAGPSV

Query:  WTGVAGVLQCVFVLVSGLIYWTSHSE
        + G+A   Q  F+   GL++    +E
Subjt:  WTGVAGVLQCVFVLVSGLIYWTSHSE

P56557 Transmembrane protein 50B2.5e-0729.29Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVH--YLPGIFASFAALMFNCVRKEDIDYSPYEE---GEWRLKLWLFFAYVVSFVSLAASVG
        +D +E  +     VAG +F  GWW  +DA V         H  +  G+F++ A  M N V    +    YE    G    ++WLF  +++ F SL AS+ 
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVH--YLPGIFASFAALMFNCVRKEDIDYSPYEE---GEWRLKLWLFFAYVVSFVSLAASVG

Query:  LLIQDSVVKAGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        +L   + V     V+ G+A   Q   +  S LIY    +E
Subjt:  LLIQDSVVKAGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

Q3SZL9 Transmembrane protein 50B2.5e-0729.29Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVH--YLPGIFASFAALMFNCVRKEDIDYSPYEE---GEWRLKLWLFFAYVVSFVSLAASVG
        +D +E  +     VAG +F  GWW  +DA V         H  +  G+F++ A  M N V    +    YE    G    ++WLF  +++ F SL AS+ 
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVH--YLPGIFASFAALMFNCVRKEDIDYSPYEE---GEWRLKLWLFFAYVVSFVSLAASVG

Query:  LLIQDSVVKAGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        +L   + V     V+ G+A   Q   +  S LIY    +E
Subjt:  LLIQDSVVKAGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

Q9CXL1 Transmembrane protein 50A4.2e-1030.71Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVH--YLPGIFASFAALMFNCVRKEDIDYSPYEE---GEWRLKLWLFFAYVVSFVSLAASVG
        MD  E  +      AG +F  GWW  +DA V       F H  +  G+ A+ A LM N V    +    Y E   G+   ++WLF  ++++F SL AS+ 
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVH--YLPGIFASFAALMFNCVRKEDIDYSPYEE---GEWRLKLWLFFAYVVSFVSLAASVG

Query:  LLIQDSVVKAGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        +L    V K    V+ G+A   Q  F+   GL++    +E
Subjt:  LLIQDSVVKAGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE

Arabidopsis top hitse value%identityAlignment
AT1G36980.1 unknown protein5.9e-6887.41Show/hide
Query:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD
        MDLAELW+IFGPG +GAVFG GWWFWVDAVVCSS+ V FVHYLPGIFAS  ALMFNCVRKEDIDYSPY+EGEWRLKLWLF AYVV+FVSLAASVGLLIQD
Subjt:  MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQD

Query:  SVVKAGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
        SVVK GPS WTGVAGV QCVFVL+SGL+YWTSHSE
Subjt:  SVVKAGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTGGCGGAGCTTTGGTCAATTTTCGGCCCAGGCGTTGCCGGAGCTGTGTTTGGCGCCGGATGGTGGTTCTGGGTTGACGCCGTTGTCTGCAGTTCTGTTGCCGT
CTCCTTTGTCCACTACCTCCCAGGTATTTTTGCTTCTTTTGCGGCTTTGATGTTCAATTGCGTTCGAAAAGAAGACATCGATTATTCTCCATACGAGGAGGGGGAATGGA
GGTTGAAGCTTTGGCTCTTCTTCGCTTATGTGGTATCATTCGTTTCATTAGCAGCATCGGTTGGACTCTTGATACAAGATTCAGTAGTAAAAGCCGGGCCATCAGTGTGG
ACAGGAGTTGCAGGAGTGTTGCAGTGTGTGTTTGTGTTGGTTAGTGGGTTGATTTACTGGACTTCTCACTCGGAGTAA
mRNA sequenceShow/hide mRNA sequence
CAATGATATATTTCCCCGAATATCAGAGCTTCGAGGGAAGGTATGGGAGTTATAACATTGAGCTGGAAAAGGGTGTGAGCCTGTGAGGTGTGCGATCATTCAGTTCACAC
TACCCTCTCCAGATCGACCCGCTTCCAACAACCTGCGTAAGGAGAAAGCAAAAACAAAGAGCCCCACAAATGGATTTGGCGGAGCTTTGGTCAATTTTCGGCCCAGGCGT
TGCCGGAGCTGTGTTTGGCGCCGGATGGTGGTTCTGGGTTGACGCCGTTGTCTGCAGTTCTGTTGCCGTCTCCTTTGTCCACTACCTCCCAGGTATTTTTGCTTCTTTTG
CGGCTTTGATGTTCAATTGCGTTCGAAAAGAAGACATCGATTATTCTCCATACGAGGAGGGGGAATGGAGGTTGAAGCTTTGGCTCTTCTTCGCTTATGTGGTATCATTC
GTTTCATTAGCAGCATCGGTTGGACTCTTGATACAAGATTCAGTAGTAAAAGCCGGGCCATCAGTGTGGACAGGAGTTGCAGGAGTGTTGCAGTGTGTGTTTGTGTTGGT
TAGTGGGTTGATTTACTGGACTTCTCACTCGGAGTAAGTTGGAAAAAATTATGCACCAAGGCAAGATCTCAAAAGCTGAAGAGTCTACCAACTGTATAGAGCTCCAGTCT
GCACTGCAATGTCGAGTGGTATAGCCGACAGGGTGGCTGTAAAAATGGAGAAATTTATCACATCAAGTGACCATTTCCTACCAAATATTTAAATATAGATCTAATTAAAA
GGTAACATGTGTCCAAATTTAATTTAAGACATAAATTTGACAAATTTGGATGATGCCACCACGTGTTTTCATCATTACATTTGATAAAAAAAAATTATTTTGGTCCAAAT
AAATAGTATTATTTGGACTAAAGTTTAGTTGCGGCAAAAAATAGGCTTAAGTCAGCTTGAATGCCAAACAAGTCCAACATTCATGTGGTTGGGTCCAAGAGGTCAGGTCC
ATTCAAAAACCAAACCCAAGCTCATAAAGCTTACATGAGAACGTACCGTATAAATAAAAGAAAAGTTCTAGTCAATTGTGGGTGCGTAGCATAAATTTAGACTTCACAAA
GCCTAGAGAGAATACTCCTGGAAACCGAACGCACTCCTTGAAGTTAAAGTAATCTTTGGAGATAAAACAAATATTATTTCAAGAGTCCAACTTGAAGAACATCAAACACT
CCGCTTCTATTCATCAAGCGTACACATTCAACCGAGAGAATAAAAAGATAAGTACTAGAGACGATCGAACCACATCGTATAAAATCAACACAAACACAACGTTAAACACA
AGTTTAACTCCACAAAAAACACGTTTTTTTTATAAAAAAGATTCACGTGAACAAATTATTTATTGGATAATATATAGGCGAGTAATAAAAGATAAATAAATAAACGTTAA
AGTGTTACAATTTAATGATACCTTACCAATGATATGCGC
Protein sequenceShow/hide protein sequence
MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKAGPSVW
TGVAGVLQCVFVLVSGLIYWTSHSE