; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy5G014765 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G014765
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationGy14Chr5:20491460..20492118
RNA-Seq ExpressionCsGy5G014765
SyntenyCsGy5G014765
Gene Ontology termsGO:0044267 - cellular protein metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044286 - E3 ubiquitin-protein ligase SINA-like, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648426.1 hypothetical protein Csa_009376 [Cucumis sativus]1.13e-129100Show/hide
Query:  MKFSVRMDILHALPAATNLRMNVQPARGLLAIIVVEQLRRFLNPLNFPANNQSLDGNGSDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATN
        MKFSVRMDILHALPAATNLRMNVQPARGLLAIIVVEQLRRFLNPLNFPANNQSLDGNGSDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATN
Subjt:  MKFSVRMDILHALPAATNLRMNVQPARGLLAIIVVEQLRRFLNPLNFPANNQSLDGNGSDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATN

Query:  FHFRSSFTICLKTDDTYHVLQEQDGPSLVLQSSMKNIQSSSDYCHSTRVLMIPRDLFSSSGMIKLNICIWQNGSSPVHHR
        FHFRSSFTICLKTDDTYHVLQEQDGPSLVLQSSMKNIQSSSDYCHSTRVLMIPRDLFSSSGMIKLNICIWQNGSSPVHHR
Subjt:  FHFRSSFTICLKTDDTYHVLQEQDGPSLVLQSSMKNIQSSSDYCHSTRVLMIPRDLFSSSGMIKLNICIWQNGSSPVHHR

XP_008460511.1 PREDICTED: E3 ubiquitin-protein ligase SINA-like 7 [Cucumis melo]2.04e-6869.09Show/hide
Query:  GNGSDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFRSSFTICLKTDDTYHVLQEQDGP-----------------------------
        GN SDH+KTCLYAPCLCPY DCKF+AS+KQLSLHFSNKHT+SATNFHF SSFTICLKT+DTYHVLQEQDG                              
Subjt:  GNGSDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFRSSFTICLKTDDTYHVLQEQDGP-----------------------------

Query:  -----------SLVLQSSMKNIQSSSDYCHSTRVLMIPRDLFSSSGMIKLNICIWQNGSSPVHHR
                   SLVLQSSMKNIQSSSD CHSTR LMIPRDLFSSSGMIKLNICIWQNGSSPVHHR
Subjt:  -----------SLVLQSSMKNIQSSSDYCHSTRVLMIPRDLFSSSGMIKLNICIWQNGSSPVHHR

XP_022141698.1 E3 ubiquitin-protein ligase SINA-like 10 [Momordica charantia]1.22e-5057.06Show/hide
Query:  GNGSDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFRSSFTICLKTDDTYHVLQEQDGP-----------------------------
        GN S+H+KTCLYAPCLCP  DC F ASSKQLSLHFS+KH +SATNF F SSFTICLKTDD+YH+LQEQD                               
Subjt:  GNGSDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFRSSFTICLKTDDTYHVLQEQDGP-----------------------------

Query:  ------------SLVLQSSMKNIQSSSDYCHSTRVLMIPRDLFSSSGMIKLNICIWQNGSSPV
                    SL L SSMKNI+SSSD CHSTR L+IP DLF S G IKL+ICIW++GSSPV
Subjt:  ------------SLVLQSSMKNIQSSSDYCHSTRVLMIPRDLFSSSGMIKLNICIWQNGSSPV

XP_022956630.1 E3 ubiquitin-protein ligase SINA-like 10 [Cucurbita moschata]8.52e-4757.41Show/hide
Query:  GNGSDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFRSSFTICLKTDDTYHVLQEQ-DGP----------------------------
        G+ SDH+K CL+APC CP  DC F+ASSKQLSLHFS+KHTDSA +F F SSFTICL  +D Y VLQEQ DG                             
Subjt:  GNGSDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFRSSFTICLKTDDTYHVLQEQ-DGP----------------------------

Query:  ------------SLVLQSSMKNIQSSSDYCHSTRVLMIPRDLFSSSGMIKLNICIWQNGSSP
                    SLVLQSSMKNIQSSSD C STR L+IPRDLFSSSGMIKLNICIWQN  +P
Subjt:  ------------SLVLQSSMKNIQSSSDYCHSTRVLMIPRDLFSSSGMIKLNICIWQNGSSP

XP_038874338.1 putative E3 ubiquitin-protein ligase SINA-like 6 [Benincasa hispida]1.03e-6057.07Show/hide
Query:  LRRFLNPLNFPANNQSLD-------GNGSDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFRSSFTICLKTDDTYHVLQEQDGP----
        + + L  + FP              GN SDH+KTCLYAPCLCP+ DC FMASSKQLSLHFSNKHT+SATNF F SSFTICLKT++TY VLQEQD      
Subjt:  LRRFLNPLNFPANNQSLD-------GNGSDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFRSSFTICLKTDDTYHVLQEQDGP----

Query:  -------------------------------------SLVLQSSMKNIQSSSDYCHSTRVLMIPRDLFSSSGMIKLNICIWQNGSSPVHHR
                                             SLVLQSSMKNIQSSSD CHSTR LMIPRDLF SSGMI+LNICIWQNGS PV HR
Subjt:  -------------------------------------SLVLQSSMKNIQSSSDYCHSTRVLMIPRDLFSSSGMIKLNICIWQNGSSPVHHR

TrEMBL top hitse value%identityAlignment
A0A0A0KTM5 Uncharacterized protein2.43e-8890.28Show/hide
Query:  MKFSVRMDILHALPAATNLRMNVQPARGLLAIIVVEQLRRFLNPLNFPANNQSLDGNGSDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATN
        MKFSVRMDILHALPAATNLRMNVQPARGLLAIIVVEQLRRFLNPLNFPANNQSLDGNGSDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATN
Subjt:  MKFSVRMDILHALPAATNLRMNVQPARGLLAIIVVEQLRRFLNPLNFPANNQSLDGNGSDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATN

Query:  FHFRSSFTICLKTDDTYHVLQEQDGPSLVLQSSMKNIQSSSDYC
        FHFRSSFTICLKTDDTYHVLQEQDG   +L +S KN+ +    C
Subjt:  FHFRSSFTICLKTDDTYHVLQEQDGPSLVLQSSMKNIQSSSDYC

A0A1S3CD49 RING-type E3 ubiquitin transferase9.86e-6969.09Show/hide
Query:  GNGSDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFRSSFTICLKTDDTYHVLQEQDGP-----------------------------
        GN SDH+KTCLYAPCLCPY DCKF+AS+KQLSLHFSNKHT+SATNFHF SSFTICLKT+DTYHVLQEQDG                              
Subjt:  GNGSDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFRSSFTICLKTDDTYHVLQEQDGP-----------------------------

Query:  -----------SLVLQSSMKNIQSSSDYCHSTRVLMIPRDLFSSSGMIKLNICIWQNGSSPVHHR
                   SLVLQSSMKNIQSSSD CHSTR LMIPRDLFSSSGMIKLNICIWQNGSSPVHHR
Subjt:  -----------SLVLQSSMKNIQSSSDYCHSTRVLMIPRDLFSSSGMIKLNICIWQNGSSPVHHR

A0A6J1CL96 RING-type E3 ubiquitin transferase5.90e-5157.06Show/hide
Query:  GNGSDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFRSSFTICLKTDDTYHVLQEQDGP-----------------------------
        GN S+H+KTCLYAPCLCP  DC F ASSKQLSLHFS+KH +SATNF F SSFTICLKTDD+YH+LQEQD                               
Subjt:  GNGSDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFRSSFTICLKTDDTYHVLQEQDGP-----------------------------

Query:  ------------SLVLQSSMKNIQSSSDYCHSTRVLMIPRDLFSSSGMIKLNICIWQNGSSPV
                    SL L SSMKNI+SSSD CHSTR L+IP DLF S G IKL+ICIW++GSSPV
Subjt:  ------------SLVLQSSMKNIQSSSDYCHSTRVLMIPRDLFSSSGMIKLNICIWQNGSSPV

A0A6J1GYB0 RING-type E3 ubiquitin transferase4.12e-4757.41Show/hide
Query:  GNGSDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFRSSFTICLKTDDTYHVLQEQ-DGP----------------------------
        G+ SDH+K CL+APC CP  DC F+ASSKQLSLHFS+KHTDSA +F F SSFTICL  +D Y VLQEQ DG                             
Subjt:  GNGSDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFRSSFTICLKTDDTYHVLQEQ-DGP----------------------------

Query:  ------------SLVLQSSMKNIQSSSDYCHSTRVLMIPRDLFSSSGMIKLNICIWQNGSSP
                    SLVLQSSMKNIQSSSD C STR L+IPRDLFSSSGMIKLNICIWQN  +P
Subjt:  ------------SLVLQSSMKNIQSSSDYCHSTRVLMIPRDLFSSSGMIKLNICIWQNGSSP

A0A6J1JTG5 RING-type E3 ubiquitin transferase4.78e-4255.21Show/hide
Query:  GNGSDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFRSSFTICLKTDDTYHVLQEQ-DGP----------------------------
        G+ SDH K CL+APC CP  DC F+ASSKQLSLHFS+KHTDSA +F F SSFTICL  +D Y VLQEQ DG                             
Subjt:  GNGSDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFRSSFTICLKTDDTYHVLQEQ-DGP----------------------------

Query:  ------------SLVLQSSMKNIQSSSDYCHSTRVLMIPRDLFSSSGMIKLNICIWQN-GSSP
                    SLVLQSSMKNI+SSSD   STR L+IPRDLFSSS  IKLNICIWQN G +P
Subjt:  ------------SLVLQSSMKNIQSSSDYCHSTRVLMIPRDLFSSSGMIKLNICIWQN-GSSP

SwissProt top hitse value%identityAlignment
Q84K34 E3 ubiquitin-protein ligase SINA-like 101.7e-0633.77Show/hide
Query:  GNGSDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFRSSFTICLKTDDTYHVLQEQ-DGPSLVLQ
        GN   H++ C++ PC CP  DC +    K L+ H   +H D   +F + +  TI L  +    +LQE+ DG  +V+Q
Subjt:  GNGSDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFRSSFTICLKTDDTYHVLQEQ-DGPSLVLQ

Arabidopsis top hitse value%identityAlignment
AT5G37930.1 Protein with RING/U-box and TRAF-like domains1.2e-0733.77Show/hide
Query:  GNGSDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFRSSFTICLKTDDTYHVLQEQ-DGPSLVLQ
        GN   H++ C++ PC CP  DC +    K L+ H   +H D   +F + +  TI L  +    +LQE+ DG  +V+Q
Subjt:  GNGSDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFRSSFTICLKTDDTYHVLQEQ-DGPSLVLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTTAGTGTGAGAATGGACATATTGCATGCTCTTCCTGCTGCAACAAACTTAAGAATGAATGTGCAACCTGCCCGTGGCCTATTGGCTATAATCGTTGTCGAGCA
GTTGAGAAGGTTCTTGAATCCATTAAATTTCCCTGCAAACAATCAAAGTTTGGATGGCAACGGAAGTGACCACAAAAAGACATGCCTATATGCCCCTTGTTTATGCCCCT
ATTTTGATTGCAAATTTATGGCTTCATCTAAGCAGTTATCATTACACTTTAGCAATAAACATACAGACTCCGCTACCAACTTCCATTTCAGATCTAGCTTCACCATATGC
TTAAAAACTGACGATACTTACCACGTCCTTCAAGAACAAGATGGACCTTCCCTGGTTTTACAATCTTCCATGAAGAACATTCAATCGTCATCAGATTATTGTCACTCTAC
GAGGGTTCTTATGATTCCACGTGATTTATTTAGTTCTTCTGGCATGATTAAGTTGAATATTTGCATATGGCAAAATGGTTCATCTCCGGTGCACCATAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATTTAGTGTGAGAATGGACATATTGCATGCTCTTCCTGCTGCAACAAACTTAAGAATGAATGTGCAACCTGCCCGTGGCCTATTGGCTATAATCGTTGTCGAGCA
GTTGAGAAGGTTCTTGAATCCATTAAATTTCCCTGCAAACAATCAAAGTTTGGATGGCAACGGAAGTGACCACAAAAAGACATGCCTATATGCCCCTTGTTTATGCCCCT
ATTTTGATTGCAAATTTATGGCTTCATCTAAGCAGTTATCATTACACTTTAGCAATAAACATACAGACTCCGCTACCAACTTCCATTTCAGATCTAGCTTCACCATATGC
TTAAAAACTGACGATACTTACCACGTCCTTCAAGAACAAGATGGACCTTCCCTGGTTTTACAATCTTCCATGAAGAACATTCAATCGTCATCAGATTATTGTCACTCTAC
GAGGGTTCTTATGATTCCACGTGATTTATTTAGTTCTTCTGGCATGATTAAGTTGAATATTTGCATATGGCAAAATGGTTCATCTCCGGTGCACCATAGATGA
Protein sequenceShow/hide protein sequence
MKFSVRMDILHALPAATNLRMNVQPARGLLAIIVVEQLRRFLNPLNFPANNQSLDGNGSDHKKTCLYAPCLCPYFDCKFMASSKQLSLHFSNKHTDSATNFHFRSSFTIC
LKTDDTYHVLQEQDGPSLVLQSSMKNIQSSSDYCHSTRVLMIPRDLFSSSGMIKLNICIWQNGSSPVHHR