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CsGy5G014870 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G014870
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionEF hand calcium-binding family protein
Genome locationGy14Chr5:20624353..20624607
RNA-Seq ExpressionCsGy5G014870
SyntenyCsGy5G014870
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140303.1 polcalcin Ole e 3 [Cucumis sativus]8.87e-52100Show/hide
Query:  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
Subjt:  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

XP_016902555.1 PREDICTED: polcalcin Ole e 3 [Cucumis melo]2.55e-5198.81Show/hide
Query:  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADDPQDQAERERIFKRFDANGDGKISS+ELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
Subjt:  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

XP_022141635.1 polcalcin Bet v 4 [Momordica charantia]1.21e-4995.24Show/hide
Query:  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADDPQD+ ER+RIFKRFDANGDGKIS+AELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
Subjt:  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

XP_031392869.1 polcalcin Ole e 3 [Punica granatum]8.24e-4892.86Show/hide
Query:  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADDPQ+ AERERIFKRFDANGDGKISSAELG+ALKTLGSVTA+EVQRMMAEIDTDGDGFIS+EEFTDFARANRGL+KDVAKIF
Subjt:  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

XP_038875780.1 polcalcin Ole e 3 [Benincasa hispida]7.31e-5197.62Show/hide
Query:  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADDPQDQAERERIFKRFDANGDGKIS++ELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
Subjt:  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

TrEMBL top hitse value%identityAlignment
A0A0A0KQB8 Uncharacterized protein4.30e-52100Show/hide
Query:  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
Subjt:  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

A0A1S4E3J8 polcalcin Ole e 31.23e-5198.81Show/hide
Query:  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADDPQDQAERERIFKRFDANGDGKISS+ELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
Subjt:  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

A0A2I0KIR2 polcalcin Ole e 33.99e-4892.86Show/hide
Query:  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADDPQ+ AERERIFKRFDANGDGKISSAELG+ALKTLGSVTA+EVQRMMAEIDTDGDGFIS+EEFTDFARANRGL+KDVAKIF
Subjt:  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

A0A5A7V407 Polcalcin Ole e 31.23e-5198.81Show/hide
Query:  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADDPQDQAERERIFKRFDANGDGKISS+ELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
Subjt:  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

A0A6J1CIN1 polcalcin Bet v 45.88e-5095.24Show/hide
Query:  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADDPQD+ ER+RIFKRFDANGDGKIS+AELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
Subjt:  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

SwissProt top hitse value%identityAlignment
O81092 Polcalcin Ole e 33.0e-3588.1Show/hide
Query:  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADDPQ+ AE ERIFKRFDANGDGKISS+ELGE LKTLGSVT +E+QRMMAEIDTDGDGFIS+EEFT FARANRGLVKDVAKIF
Subjt:  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

O81701 Polcalcin Aln g 41.3e-3385.88Show/hide
Query:  MADD-PQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADD PQDQAE ERIFK FDANGDGKIS++ELG+ALKTLGSVT DEV+ MMAEIDTDGDGFIS++EFT+FARANRGLVKDVAKIF
Subjt:  MADD-PQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

Q39419 Polcalcin Bet v 45.2e-3587.06Show/hide
Query:  MADD-PQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADD PQD+AERERIFKRFDANGDGKIS+AELGEALKTLGS+T DEV+ MMAEIDTDGDGFIS++EFTDF RANRGL+KDVAKIF
Subjt:  MADD-PQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

Q84V36 Polcalcin Che a 35.7e-3486.59Show/hide
Query:  DDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        D PQD A+RERIFKRFD NGDGKISS+ELG+ALKTLGSVT DEV+RMMAEIDTDGDGFIS++EFTDFARANRGLVKDV+KIF
Subjt:  DDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

Q8VWY6 Polcalcin Nic t 14.4e-3483.33Show/hide
Query:  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MA+DPQD A+RERIFKRFD NGDGKISSAELGE LK LGSVT++EVQ MMAE+DTDGDGFISYEEF +FARANRGL+KDVAK+F
Subjt:  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

Arabidopsis top hitse value%identityAlignment
AT1G18210.1 Calcium-binding EF-hand family protein9.2e-1143.66Show/hide
Query:  DPQDQAERERIFKRFDANGDGKISSAELGEALKTLG-SVTADEVQRMMAEIDTDGDGFISYEEFTDFARAN
        D  +  E +++F +FD+NGDGKIS  ELG   K +G S T  E+ R++ E+DTD DG+I+ +EF+   R++
Subjt:  DPQDQAERERIFKRFDANGDGKISSAELGEALKTLG-SVTADEVQRMMAEIDTDGDGFISYEEFTDFARAN

AT1G24620.1 EF hand calcium-binding protein family2.4e-1151.67Show/hide
Query:  ERERIFKRFDANGDGKISSAELGEALKTLG-SVTADEVQRMMAEIDTDGDGFISYEEFTD
        E E +FK+FD NGDGKISS ELG  + +LG  V  +E+++ + EID  GDG+I++EEF +
Subjt:  ERERIFKRFDANGDGKISSAELGEALKTLG-SVTADEVQRMMAEIDTDGDGFISYEEFTD

AT1G73630.1 EF hand calcium-binding protein family4.4e-1346.67Show/hide
Query:  PQDQAERERIFKRFDANGDGKISSAELGEALKTLG-SVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVK
        P    E +++F +FDANGDGKIS +ELG   K++G S T +E+ R++ EID D DGFI+ EEF    R++   V+
Subjt:  PQDQAERERIFKRFDANGDGKISSAELGEALKTLG-SVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVK

AT3G03430.1 Calcium-binding EF-hand family protein1.8e-3075.31Show/hide
Query:  DPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        D  ++AE +RIFK+FDANGDGKIS+AELG+ALK LGSVT ++++RMMAEIDTDGDG+ISY+EF DFA ANRGL+KDVAKIF
Subjt:  DPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

AT5G17480.1 pollen calcium-binding protein 11.2e-3181.48Show/hide
Query:  DPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        D  ++AE +RIFK+FDANGDGKIS+AEL EALKTLGSVTAD+V+RMMAEIDTDGDG ISY+EFTDFA ANRGL+KDVAKIF
Subjt:  DPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGATGATCCTCAAGACCAAGCTGAACGTGAACGCATTTTCAAGCGCTTTGACGCCAATGGCGACGGTAAGATCTCTTCCGCTGAGCTTGGGGAAGCCTTGAAGAC
CCTCGGCTCCGTCACCGCCGACGAAGTACAACGGATGATGGCTGAGATCGACACTGACGGTGATGGCTTCATTTCCTACGAAGAGTTCACAGATTTCGCTCGTGCTAACC
GTGGATTAGTCAAGGATGTTGCTAAGATATTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGATGATCCTCAAGACCAAGCTGAACGTGAACGCATTTTCAAGCGCTTTGACGCCAATGGCGACGGTAAGATCTCTTCCGCTGAGCTTGGGGAAGCCTTGAAGAC
CCTCGGCTCCGTCACCGCCGACGAAGTACAACGGATGATGGCTGAGATCGACACTGACGGTGATGGCTTCATTTCCTACGAAGAGTTCACAGATTTCGCTCGTGCTAACC
GTGGATTAGTCAAGGATGTTGCTAAGATATTCTAA
Protein sequenceShow/hide protein sequence
MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF