CuGenDBv2

Gene ID	CsGy5G014880
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	30S ribosomal protein S8, chloroplastic
Genome location	Gy14Chr5:20628585..20628989
RNA-Seq Expression	CsGy5G014880
Synteny	CsGy5G014880
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0009507 - chloroplast (cellular component) GO:0003735 - structural constituent of ribosome (molecular function) GO:0019843 - rRNA binding (molecular function)
InterPro domains	IPR000630 - Ribosomal protein S8 IPR035987 - Ribosomal protein S8 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

YP_004841819.1 ribosomal protein S8 [Cucumis melo subsp. melo]

9.15e-91

99.25

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
        MGKDTIANIITSIRNADMNRKGMVRIP+TNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL

Query:  GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW
        GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW
Subjt:  GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW

YP_009004078.1 ribosomal protein S8 [Cucumis hystrix]

3.19e-91

100

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
        MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL

Query:  GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW
        GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW
Subjt:  GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW

YP_009326025.1 ribosomal protein S8 [Citrullus lanatus]

3.73e-90

98.51

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
        MGKDTIANIITSIRNADMNRKGMVRIP+TNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQ+IPRIL
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL

Query:  GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW
        GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW
Subjt:  GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW

YP_009525221.1 ribosomal protein S8 [Hodgsonia macrocarpa]

2.62e-90

98.51

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
        MGKDTIANIITSIRNADMNRKGMVRIP+TNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQ+IPRIL
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL

Query:  GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW
        GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW
Subjt:  GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW

YP_009751857.1 ribosomal protein S8 [Indofevillea khasiana]

3.73e-90

97.76

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
        MGKDTIANIITSIRNADMNRKGMVRIP+TNITENI+KILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQ+IPRIL
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL

Query:  GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW
        GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW
Subjt:  GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW

TrEMBL top hits

e value

%identity

Alignment

A0A1P8C7T2 30S ribosomal protein S8, chloroplastic

1.54e-91

100

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
        MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL

Query:  GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW
        GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW
Subjt:  GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW

A0A1X9Q170 30S ribosomal protein S8, chloroplastic

1.54e-91

100

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
        MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL

Query:  GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW
        GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW
Subjt:  GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW

A0A218KG86 30S ribosomal protein S8, chloroplastic

1.54e-91

100

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
        MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL

Query:  GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW
        GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW
Subjt:  GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW

A0A343UM68 30S ribosomal protein S8, chloroplastic

1.54e-91

100

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
        MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL

Query:  GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW
        GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW
Subjt:  GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW

W8E156 Ribosomal protein S8

1.54e-91

100

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
        MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL

Query:  GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW
        GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW
Subjt:  GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW

SwissProt top hits

e value

%identity

Alignment

A0ZZ70 30S ribosomal protein S8, chloroplastic

2.1e-62

88.06

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
        MGKDTIA+IITSIRNADMNRKG ++I +TNITENIV+ILLREGFI+NVRKHRE NK F VLTLRHRRNRKGP++TILNL+RISRPGLRIYSNYQ+IPRIL
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL

Query:  GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW
        GGMGIVILSTSRGIMTDREARL+GIGGEILCYIW
Subjt:  GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW

Q2L942 30S ribosomal protein S8, chloroplastic

7.9e-62

88.06

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
        MGKDTIA+IITSIRNADMNRKG ++I +TNITENIVKILLREGFI+NVRKHRE NK F VLTLRHRRNRKGP++TILNL+RISRPGLRIYSNYQ+IPRIL
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL

Query:  GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW
        GGMGIVILSTSRGIMTDREARL+GIGGEILC IW
Subjt:  GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW

Q2MI65 30S ribosomal protein S8, chloroplastic

1.8e-61

88.06

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
        MG+DTIA IITSIRNADM+RK +VRI +TNITENIV+ILLREGFIENVRKHRE+NK F VLTLRHRRNRK PY+ ILNLKRISRPGLRIYSNYQ+IPRIL
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL

Query:  GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW
        GGMGIVILSTSRGIMTDREARL+GIGGEILCYIW
Subjt:  GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW

Q49KW3 30S ribosomal protein S8, chloroplastic

2.5e-63

88.81

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
        MG+DTIA+IITSIRNADMNRKG ++I +TNITENIVKILLREGFI+NVRKH+E+NK F VLTLRHRRNRKGPY+TILNLKRISRPGLRIYSNYQ+IPRIL
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL

Query:  GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW
        GGMGIVILSTSRGIMTDREARL+GIGGEILCYIW
Subjt:  GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW

Q4VZK0 30S ribosomal protein S8, chloroplastic

1.1e-71

100

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
        MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL

Query:  GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW
        GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW
Subjt:  GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW

Arabidopsis top hits

e value

%identity

Alignment

ATCG00770.1 ribosomal protein S8

3.4e-60

85.82

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Query:  MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL
        MGKDTIA+IITSIRNADMNRKG VRI +TNITE+IVKILLREGFIENVRKHRE+N+ F +LTLRHRRN+K  YKTILNLKRISRPGLRIYSN Q+IPRIL
Subjt:  MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRIL

Query:  GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW
        GG+GIVILSTS+GIMTDREARL+ IGGEILCYIW
Subjt:  GGMGIVILSTSRGIMTDREARLQGIGGEILCYIW

Sequences

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CDS sequence

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ATGGGTAAGGACACTATTGCTAACATAATAACCTCTATTCGCAATGCTGACATGAATAGAAAAGGAATGGTTCGAATACCAGCTACTAACATCACCGAAAACATTGTTAA
AATACTTTTACGAGAAGGTTTTATTGAAAACGTAAGGAAACATCGGGAAAGCAACAAGGATTTTTGGGTTTTAACCCTACGACATAGAAGAAATAGGAAAGGACCATATA
AAACGATTTTAAATTTAAAACGGATCAGTCGACCCGGTCTCCGAATATATTCTAACTATCAAAAAATTCCTAGAATTTTAGGAGGAATGGGCATTGTAATTCTTTCTACT
TCTCGGGGTATAATGACAGACCGAGAAGCTCGACTACAGGGAATCGGCGGCGAAATTTTGTGTTATATATGGTAA

mRNA sequence

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Protein sequence

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MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILST
SRGIMTDREARLQGIGGEILCYIW

CsGy5G014880 (gene) of Cucumber (Gy14) v2.1 genome