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CsGy5G015313 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G015313
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionelongation factor family protein
Genome locationGy14Chr5:21324436..21328129
RNA-Seq ExpressionCsGy5G015313
SyntenyCsGy5G015313
Gene Ontology termsNA
InterPro domainsIPR042116 - GTP-binding protein TypA/BipA, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648454.1 hypothetical protein Csa_008155 [Cucumis sativus]9.53e-6198.89Show/hide
Query:  MIGGDFHLIHLGFSLGFISLYCGWRKNTSFPCWDYNKISCVIGFWNNAEKLKTYDGMIIGEHSRELDLDVNLVRTKEILPISVLLAKMKM
        MIGGDFHLIHLGFSLGFISLYCGWRKNTSFPCWDYNKISCVIGFWNNAEKLKTYDGMIIGEHSRELDLDVNLVRTKE LPISVLLAKMKM
Subjt:  MIGGDFHLIHLGFSLGFISLYCGWRKNTSFPCWDYNKISCVIGFWNNAEKLKTYDGMIIGEHSRELDLDVNLVRTKEILPISVLLAKMKM
XP_031744018.1 uncharacterized protein LOC116404763 isoform X4 [Cucumis sativus]2.57e-1292.11Show/hide
Query:  KTYDGMIIGEHSRELDLDVNLVRTKEILPISVLLAKMK
        +TYDGMIIGEHSRE DLDVNLVRTKE LPISVLLAKMK
Subjt:  KTYDGMIIGEHSRELDLDVNLVRTKEILPISVLLAKMK
XP_031744019.1 uncharacterized protein LOC116404763 isoform X5 [Cucumis sativus]2.11e-1292.11Show/hide
Query:  KTYDGMIIGEHSRELDLDVNLVRTKEILPISVLLAKMK
        +TYDGMIIGEHSRE DLDVNLVRTKE LPISVLLAKMK
Subjt:  KTYDGMIIGEHSRELDLDVNLVRTKEILPISVLLAKMK
XP_031744022.1 uncharacterized protein LOC116404763 isoform X8 [Cucumis sativus]1.97e-1292.11Show/hide
Query:  KTYDGMIIGEHSRELDLDVNLVRTKEILPISVLLAKMK
        +TYDGMIIGEHSRE DLDVNLVRTKE LPISVLLAKMK
Subjt:  KTYDGMIIGEHSRELDLDVNLVRTKEILPISVLLAKMK
XP_031744024.1 uncharacterized protein LOC116404763 isoform X9 [Cucumis sativus]1.88e-1292.11Show/hide
Query:  KTYDGMIIGEHSRELDLDVNLVRTKEILPISVLLAKMK
        +TYDGMIIGEHSRE DLDVNLVRTKE LPISVLLAKMK
Subjt:  KTYDGMIIGEHSRELDLDVNLVRTKEILPISVLLAKMK
TrEMBL top hitse value%identityAlignment
A0A0A0KQE9 Uncharacterized protein2.86e-4585.06Show/hide
Query:  DFHLIHLGFSL-GFISLYCGWRKNTSFPCWDYNKISCVIGFWNNAEKLKTYDGMIIGEHSRELDLDVNLVRTKEILPISVLLAKMKM
        DF    L + L  FISLYCGWRKNTSFPCWDYNKISCVIGFWNNAEKLKTYD MIIGEHSRELDLD N+VRTKE LPISVLLAKMKM
Subjt:  DFHLIHLGFSL-GFISLYCGWRKNTSFPCWDYNKISCVIGFWNNAEKLKTYDGMIIGEHSRELDLDVNLVRTKEILPISVLLAKMKM
A0A1S3Z8Q4 GTP-binding protein TypA/BipA homolog7.80e-0574.19Show/hide
Query:  AEKLKTYDGMIIGEHSRELDLDVNLVRTKEI
        A  ++TYDGMIIGEHSR+ DLDVN VRTKE+
Subjt:  AEKLKTYDGMIIGEHSRELDLDVNLVRTKEI
A0A1S3ZNY6 GTP-binding protein TypA/BipA homolog7.80e-0574.19Show/hide
Query:  AEKLKTYDGMIIGEHSRELDLDVNLVRTKEI
        A  ++TYDGMIIGEHSR+ DLDVN VRTKE+
Subjt:  AEKLKTYDGMIIGEHSRELDLDVNLVRTKEI
A0A5B6ZN40 Uncharacterized protein5.94e-0567.74Show/hide
Query:  LKTYDGMIIGEHSRELDLDVNLVRTKEILPI
        ++TYDGMI+GEHSR+ DLD+N VRTKE+  I
Subjt:  LKTYDGMIIGEHSRELDLDVNLVRTKEILPI
A0A6A6L4H8 Uncharacterized protein7.11e-0575Show/hide
Query:  LKTYDGMIIGEHSRELDLDVNLVRTKEI
        ++TYDGMI+GEHSR+ DLDVN VRTKE+
Subjt:  LKTYDGMIIGEHSRELDLDVNLVRTKEI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G31060.1 elongation factor family protein1.6e-0567.74Show/hide
Query:  LKTYDGMIIGEHSRELDLDVNLVRTKEILPI
        L +YDGMIIGEHSRE DLD+N V+ KE+  I
Subjt:  LKTYDGMIIGEHSRELDLDVNLVRTKEILPI
AT2G31060.2 elongation factor family protein1.6e-0567.74Show/hide
Query:  LKTYDGMIIGEHSRELDLDVNLVRTKEILPI
        L +YDGMIIGEHSRE DLD+N V+ KE+  I
Subjt:  LKTYDGMIIGEHSRELDLDVNLVRTKEILPI
AT2G31060.3 elongation factor family protein1.6e-0567.74Show/hide
Query:  LKTYDGMIIGEHSRELDLDVNLVRTKEILPI
        L +YDGMIIGEHSRE DLD+N V+ KE+  I
Subjt:  LKTYDGMIIGEHSRELDLDVNLVRTKEILPI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGGTGGAGATTTTCACTTAATACATTTAGGATTTTCGTTAGGTTTTATCTCGTTGTATTGTGGATGGAGGAAGAACACAAGCTTTCCTTGTTGGGATTAC
AACAAGATTTCTTGTGTGATAGGATTTTGGAATAATGCAGAAAAGTTGAAGACTTATGATGGAATGATTATTGGAGAACATTCTAGGGAATTAGATCTAGATGTT
AATCTTGTAAGAACTAAAGAAATCTTACCAATATCCGTTCTGCTTGCAAAGATGAAAATGTGA
mRNA sequenceShow/hide mRNA sequence
GGATTCAATATTTAACAAAAACGTCTGCATTCTAGCAAGGTTTGATTTTCTCCATTTTTCTTTGAATTGGTGCTTACCTAGTGATTTTAAGATATGATTTGGAGT
AGTTGTGTAAATGACTGATGATTGGTGGAGATTTTCACTTAATACATTTAGGATTTTCGTTAGGTTTTATCTCGTTGTATTGTGGATGGAGGAAGAACACAAGCT
TTCCTTGTTGGGATTACAACAAGATTTCTTGTGTGATAGGATTTTGGAATAATGCAGAAAAGTTGAAGACTTATGATGGAATGATTATTGGAGAACATTCTAGGG
AATTAGATCTAGATGTTAATCTTGTAAGAACTAAAGAAATCTTACCAATATCCGTTCTGCTTGCAAAGATGAAAATGTGAAGCTATCTCCACCTCGACTTAGATG
AGTCTTGAAGAAACAATAGGATATGTTGCATCTGATGAACTTATTAAGGATGCAGAAGCATATGCTTACCTTTTAAAATGAAGGATTGCAACAATTTTAGAGGAA
GGAGGAGGCCTGAGGAAATTTACCAAATACTTGAGTGATAATTCTGGTGCTAAAGGATATTGCATGTATGCCTCTTTAAAGACCTTGTAAATTCCATATTTGTAA
ATTGTTTAAACTTGATTGAAAATGTACGAATATTACAAAGTGTATTATAGCATATATATGTGTATATATATATATATATATTAAAGTATCGACCATTTGTTTCTA
TATGGATGAATGAATTATAACATTATTGTCATTCAAATGGTTCGTGTAATGGCGAAGAGATAAGGAGAACATAAAAATATGGTAGTAATTGAGGGATTTGTAACA
GA
Protein sequenceShow/hide protein sequence
MIGGDFHLIHLGFSLGFISLYCGWRKNTSFPCWDYNKISCVIGFWNNAEKLKTYDGMIIGEHSRELDLDVNLVRTKEILPISVLLAKMKM