CuGenDBv2

Gene ID	CsGy5G016260
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Mannan endo-1,4-beta-mannosidase
Genome location	Gy14Chr5:22557003..22557419
RNA-Seq Expression	CsGy5G016260
Synteny	CsGy5G016260
Gene Ontology terms	GO:0071704 - organic substance metabolic process (biological process) GO:0005576 - extracellular region (cellular component) GO:0016985 - mannan endo-1,4-beta-mannosidase activity (molecular function)
InterPro domains	IPR035992 - Ricin B-like lectins

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0054032.1 endoglucanase-like [Cucumis melo var. makuwa]

1.04e-75

82.71

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Query:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI
        MYHPLSG CVRMNKKYQLG+SSCKTSNRWSHEQDG PIKL GSILCL+A+G GLP ILS+DCSSQQS WKY SNAKLQLATVDE+GQALCLQRASHSHQI
Subjt:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI

Query:  LTNKCMCPNDSECQGDPQSQWFTLVHQMYISIN
        +TNKC+C NDS+CQ DPQSQWFTLV      IN
Subjt:  LTNKCMCPNDSECQGDPQSQWFTLVHQMYISIN

KAE8648503.1 hypothetical protein Csa_009407 [Cucumis sativus]

1.14e-83

98.4

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Query:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI
        MYHPLSGECV++NKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI
Subjt:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI

Query:  LTNKCMCPNDSECQGDPQSQWFTLV
        LTNKCMCPNDSECQGDPQSQWFTLV
Subjt:  LTNKCMCPNDSECQGDPQSQWFTLV

KAE8648505.1 hypothetical protein Csa_007897 [Cucumis sativus]

2.84e-82

100

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Query:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI
        MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI
Subjt:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI

Query:  LTNKCMCPNDSECQGDPQSQWFTLV
        LTNKCMCPNDSECQGDPQSQWFTLV
Subjt:  LTNKCMCPNDSECQGDPQSQWFTLV

TYK20717.1 endoglucanase-like [Cucumis melo var. makuwa]

1.53e-74

83.46

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Query:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI
        MYHPLSG CVRMNKKYQLG+SSCKTSNRWSHEQDG PIKL GSILCL+A+G GLPPILS+DCSSQQS WKY SNAKLQLATVDE+GQALCLQRASHSHQI
Subjt:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI

Query:  LTNKCMCPNDSECQGDPQSQWFTLVHQMYISIN
        +TNKC+C NDS+CQ DPQSQWFTLV      IN
Subjt:  LTNKCMCPNDSECQGDPQSQWFTLVHQMYISIN

XP_031739082.1 glycosyl hydrolase 5 family protein [Cucumis sativus]

9.04e-83

97.6

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Query:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI
        MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQD TPIKL GSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDE+GQALCLQRASHSHQI
Subjt:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI

Query:  LTNKCMCPNDSECQGDPQSQWFTLV
        LTNKCMCPNDSECQGDPQSQWFTLV
Subjt:  LTNKCMCPNDSECQGDPQSQWFTLV

TrEMBL top hits

e value

%identity

Alignment

A0A5A7UE15 Mannan endo-1,4-beta-mannosidase

5.06e-76

82.71

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Query:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI
        MYHPLSG CVRMNKKYQLG+SSCKTSNRWSHEQDG PIKL GSILCL+A+G GLP ILS+DCSSQQS WKY SNAKLQLATVDE+GQALCLQRASHSHQI
Subjt:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI

Query:  LTNKCMCPNDSECQGDPQSQWFTLVHQMYISIN
        +TNKC+C NDS+CQ DPQSQWFTLV      IN
Subjt:  LTNKCMCPNDSECQGDPQSQWFTLVHQMYISIN

A0A5A7UGS0 Mannan endo-1,4-beta-mannosidase

7.40e-75

83.46

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Query:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI
        MYHPLSG CVRMNKKYQLG+SSCKTSNRWSHEQDG PIKL GSILCL+A+G GLPPILS+DCSSQQS WKY SNAKLQLATVDE+GQALCLQRASHSHQI
Subjt:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI

Query:  LTNKCMCPNDSECQGDPQSQWFTLVHQMYISIN
        +TNKC+C NDS+CQ DPQSQWFTLV      IN
Subjt:  LTNKCMCPNDSECQGDPQSQWFTLVHQMYISIN

A0A5A7UKF5 Mannan endo-1,4-beta-mannosidase

7.40e-75

83.46

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Query:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI
        MYHPLSG CVRMNKKYQLG+SSCKTSNRWSHEQDG PIKL GSILCL+A+G GLPPILS+DCSSQQS WKY SNAKLQLATVDE+GQALCLQRASHSHQI
Subjt:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI

Query:  LTNKCMCPNDSECQGDPQSQWFTLVHQMYISIN
        +TNKC+C NDS+CQ DPQSQWFTLV      IN
Subjt:  LTNKCMCPNDSECQGDPQSQWFTLVHQMYISIN

A0A5D3CGT4 Mannan endo-1,4-beta-mannosidase

2.19e-74

86.4

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Query:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI
        MYHPLSG C+RMNKKYQLG+SSCKTSNRWSHEQDG PIKL GSILCL+A+G GLPPILS+DCSSQQS WKY SNAKLQLATVDE+GQALCLQRASHSHQI
Subjt:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI

Query:  LTNKCMCPNDSECQGDPQSQWFTLV
        +TNKC+C NDS+CQ DPQSQWFTLV
Subjt:  LTNKCMCPNDSECQGDPQSQWFTLV

A0A5D3DAU2 Mannan endo-1,4-beta-mannosidase

7.40e-75

83.46

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Query:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI
        MYHPLSG CVRMNKKYQLG+SSCKTSNRWSHEQDG PIKL GSILCL+A+G GLPPILS+DCSSQQS WKY SNAKLQLATVDE+GQALCLQRASHSHQI
Subjt:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI

Query:  LTNKCMCPNDSECQGDPQSQWFTLVHQMYISIN
        +TNKC+C NDS+CQ DPQSQWFTLV      IN
Subjt:  LTNKCMCPNDSECQGDPQSQWFTLVHQMYISIN

SwissProt top hits

e value

%identity

Alignment

C0HLA0 Glycosyl hydrolase 5 family protein

3.4e-15

35.82

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Query:  MYHPLSGECVRMNKKYQLGVSSCKT-SNRWSHEQD-GTPIKLVGSILCLQAVGDGLPPILSKDCSS-QQSAWKYASNAKLQLAT----VDEEGQALCLQR
        +YHP SG CV       + + SC++  +RW+++     PI L+GS  C+   G+GLP I++++CS+   + W   S+A+LQL T     D + + +CL  
Subjt:  MYHPLSGECVRMNKKYQLGVSSCKT-SNRWSHEQD-GTPIKLVGSILCLQAVGDGLPPILSKDCSS-QQSAWKYASNAKLQLAT----VDEEGQALCLQR

Query:  ASHSHQILTNKCMCPNDSEC--QGDPQSQWFTLV
         S S  I TN+C+C  DS C  + +P+ QWF ++
Subjt:  ASHSHQILTNKCMCPNDSEC--QGDPQSQWFTLV

Arabidopsis top hits

e value

%identity

Alignment

AT3G26130.1 Cellulase (glycosyl hydrolase family 5) protein

1.3e-14

35.43

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Query:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCS-SQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQ
        M+HP +G C+     +QL + SC  S  W              ILCL+A   G    L    S S  S WK  S++K+QL+++ + G ++CL   + ++ 
Subjt:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCS-SQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQ

Query:  ILTNKCMC-PNDSECQGDPQSQWFTLV
        I+TN C C   +S C  DP+SQWF LV
Subjt:  ILTNKCMC-PNDSECQGDPQSQWFTLV

Sequences

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CDS sequence

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ATGTACCATCCTCTTAGTGGTGAGTGCGTGCGAATGAACAAAAAGTACCAACTAGGAGTTAGTAGCTGCAAGACATCAAATCGTTGGAGTCACGAACAAGATGGCACTCC
AATTAAGTTGGTAGGATCTATATTGTGTTTGCAAGCTGTAGGAGATGGACTCCCTCCAATTCTATCTAAAGACTGCTCAAGCCAACAAAGTGCATGGAAATATGCTTCAA
ATGCTAAGCTTCAACTGGCCACTGTTGATGAAGAAGGACAAGCCTTGTGTTTGCAAAGGGCTTCTCATTCCCATCAAATTTTGACTAACAAATGCATGTGTCCTAATGAT
TCTGAATGCCAAGGAGATCCACAAAGTCAATGGTTTACACTTGTACATCAAATGTACATCTCAATTAATTTATGTACAAAATTGTAA

mRNA sequence

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Protein sequence

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MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQILTNKCMCPND
SECQGDPQSQWFTLVHQMYISINLCTKL

CsGy5G016260 (gene) of Cucumber (Gy14) v2.1 genome