CuGenDBv2

Gene ID	CsGy5G016290
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Mannan endo-1,4-beta-mannosidase
Genome location	Gy14Chr5:22566926..22567324
RNA-Seq Expression	CsGy5G016290
Synteny	CsGy5G016290
Gene Ontology terms	GO:0071704 - organic substance metabolic process (biological process) GO:0005576 - extracellular region (cellular component) GO:0016985 - mannan endo-1,4-beta-mannosidase activity (molecular function)
InterPro domains	IPR035992 - Ricin B-like lectins

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0054032.1 endoglucanase-like [Cucumis melo var. makuwa]

1.08e-78

86.05

Show/hide

Query:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI
        MYHPLSG CVRMNKKYQLG+SSCKTSNRWSHEQDG PIKL GSILCL+A+G GLP ILS+DCSSQQS WKY SNAKLQLATVDE+GQALCLQRASHSHQI
Subjt:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI

Query:  LTNKCMCPNDSECQGDPQSQWFTLVPSNV
        +TNKC+C NDS+CQ DPQSQWFTLVPSN+
Subjt:  LTNKCMCPNDSECQGDPQSQWFTLVPSNV

KAE8648503.1 hypothetical protein Csa_009407 [Cucumis sativus]

3.16e-90

98.48

Show/hide

Query:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI
        MYHPLSGECV++NKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI
Subjt:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI

Query:  LTNKCMCPNDSECQGDPQSQWFTLVPSNVHLN
        LTNKCMCPNDSECQGDPQSQWFTLVPSNVHLN
Subjt:  LTNKCMCPNDSECQGDPQSQWFTLVPSNVHLN

KAE8648505.1 hypothetical protein Csa_007897 [Cucumis sativus]

1.88e-85

99.22

Show/hide

Query:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI
        MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI
Subjt:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI

Query:  LTNKCMCPNDSECQGDPQSQWFTLVPSNV
        LTNKCMCPNDSECQGDPQSQWFTLVPSN+
Subjt:  LTNKCMCPNDSECQGDPQSQWFTLVPSNV

TYK11103.1 endoglucanase-like [Cucumis melo var. makuwa]

4.51e-78

85.5

Show/hide

Query:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI
        MYHPLSG C+RMNKKYQLG+SSCKTSNRWSHEQDG PIKL GSILCL+A+G GLPPILS+DCSSQQS WKY SNAKLQLATVDE+GQALCLQRASHSHQI
Subjt:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI

Query:  LTNKCMCPNDSECQGDPQSQWFTLVPSNVHL
        +TNKC+C NDS+CQ DPQSQWFTLVPSN+ L
Subjt:  LTNKCMCPNDSECQGDPQSQWFTLVPSNVHL

XP_031739082.1 glycosyl hydrolase 5 family protein [Cucumis sativus]

1.42e-88

96.97

Show/hide

Query:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI
        MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQD TPIKL GSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDE+GQALCLQRASHSHQI
Subjt:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI

Query:  LTNKCMCPNDSECQGDPQSQWFTLVPSNVHLN
        LTNKCMCPNDSECQGDPQSQWFTLVPSNVHL+
Subjt:  LTNKCMCPNDSECQGDPQSQWFTLVPSNVHLN

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TI19 Mannan endo-1,4-beta-mannosidase

6.51e-78

85.5

Show/hide

Query:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI
        MYHPLSG C+RMNKKYQLG+SSCKTSNRWSHEQDG PIKL GSILCL+A+G GLPPILS+DCSSQQS WKY SNAKLQLATVDE+GQALCLQRASHSHQI
Subjt:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI

Query:  LTNKCMCPNDSECQGDPQSQWFTLVPSNVHL
        +TNKC+C NDS+CQ DPQSQWFTLVPSN+ L
Subjt:  LTNKCMCPNDSECQGDPQSQWFTLVPSNVHL

A0A5A7UE15 Mannan endo-1,4-beta-mannosidase

5.24e-79

86.05

Show/hide

Query:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI
        MYHPLSG CVRMNKKYQLG+SSCKTSNRWSHEQDG PIKL GSILCL+A+G GLP ILS+DCSSQQS WKY SNAKLQLATVDE+GQALCLQRASHSHQI
Subjt:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI

Query:  LTNKCMCPNDSECQGDPQSQWFTLVPSNV
        +TNKC+C NDS+CQ DPQSQWFTLVPSN+
Subjt:  LTNKCMCPNDSECQGDPQSQWFTLVPSNV

A0A5A7UKF5 Mannan endo-1,4-beta-mannosidase

8.36e-78

86.82

Show/hide

Query:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI
        MYHPLSG CVRMNKKYQLG+SSCKTSNRWSHEQDG PIKL GSILCL+A+G GLPPILS+DCSSQQS WKY SNAKLQLATVDE+GQALCLQRASHSHQI
Subjt:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI

Query:  LTNKCMCPNDSECQGDPQSQWFTLVPSNV
        +TNKC+C NDS+CQ DPQSQWFTLVPSN+
Subjt:  LTNKCMCPNDSECQGDPQSQWFTLVPSNV

A0A5D3CGT4 Mannan endo-1,4-beta-mannosidase

2.18e-78

85.5

Show/hide

Query:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI
        MYHPLSG C+RMNKKYQLG+SSCKTSNRWSHEQDG PIKL GSILCL+A+G GLPPILS+DCSSQQS WKY SNAKLQLATVDE+GQALCLQRASHSHQI
Subjt:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI

Query:  LTNKCMCPNDSECQGDPQSQWFTLVPSNVHL
        +TNKC+C NDS+CQ DPQSQWFTLVPSN+ L
Subjt:  LTNKCMCPNDSECQGDPQSQWFTLVPSNVHL

A0A5D3DAU2 Mannan endo-1,4-beta-mannosidase

8.36e-78

86.82

Show/hide

Query:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI
        MYHPLSG CVRMNKKYQLG+SSCKTSNRWSHEQDG PIKL GSILCL+A+G GLPPILS+DCSSQQS WKY SNAKLQLATVDE+GQALCLQRASHSHQI
Subjt:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQI

Query:  LTNKCMCPNDSECQGDPQSQWFTLVPSNV
        +TNKC+C NDS+CQ DPQSQWFTLVPSN+
Subjt:  LTNKCMCPNDSECQGDPQSQWFTLVPSNV

SwissProt top hits

e value

%identity

Alignment

C0HLA0 Glycosyl hydrolase 5 family protein

1.7e-16

35.71

Show/hide

Query:  MYHPLSGECVRMNKKYQLGVSSCKT-SNRWSHEQD-GTPIKLVGSILCLQAVGDGLPPILSKDCSS-QQSAWKYASNAKLQLAT----VDEEGQALCLQR
        +YHP SG CV       + + SC++  +RW+++     PI L+GS  C+   G+GLP I++++CS+   + W   S+A+LQL T     D + + +CL  
Subjt:  MYHPLSGECVRMNKKYQLGVSSCKT-SNRWSHEQD-GTPIKLVGSILCLQAVGDGLPPILSKDCSS-QQSAWKYASNAKLQLAT----VDEEGQALCLQR

Query:  ASHSHQILTNKCMCPNDSEC--QGDPQSQWFTLVPSNVHL
         S S  I TN+C+C  DS C  + +P+ QWF ++ +N  L
Subjt:  ASHSHQILTNKCMCPNDSEC--QGDPQSQWFTLVPSNVHL

Arabidopsis top hits

e value

%identity

Alignment

AT3G26130.1 Cellulase (glycosyl hydrolase family 5) protein

4.3e-15

35.66

Show/hide

Query:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCS-SQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQ
        M+HP +G C+     +QL + SC  S  W              ILCL+A   G    L    S S  S WK  S++K+QL+++ + G ++CL   + ++ 
Subjt:  MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCS-SQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQ

Query:  ILTNKCMC-PNDSECQGDPQSQWFTLVPS
        I+TN C C   +S C  DP+SQWF LV S
Subjt:  ILTNKCMC-PNDSECQGDPQSQWFTLVPS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTACCATCCTCTTAGTGGTGAGTGCGTGCGAATGAACAAAAAGTACCAACTAGGAGTTAGTAGCTGCAAGACATCAAATCGTTGGAGTCACGAACAAGATGGCACTCC
AATTAAGTTGGTAGGATCTATATTGTGTTTGCAAGCTGTAGGAGATGGACTCCCTCCAATTCTATCTAAAGACTGCTCAAGCCAACAAAGTGCATGGAAATATGCTTCAA
ATGCTAAGCTTCAACTGGCCACTGTTGATGAAGAAGGACAAGCCTTGTGTTTGCAAAGGGCTTCTCATTCCCATCAAATTTTGACTAACAAATGCATGTGTCCTAATGAT
TCTGAATGCCAAGGAGATCCACAAAGTCAATGGTTTACACTTGTACCATCAAATGTACATCTCAATTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MYHPLSGECVRMNKKYQLGVSSCKTSNRWSHEQDGTPIKLVGSILCLQAVGDGLPPILSKDCSSQQSAWKYASNAKLQLATVDEEGQALCLQRASHSHQILTNKCMCPND
SECQGDPQSQWFTLVPSNVHLN

CsGy5G016290 (gene) of Cucumber (Gy14) v2.1 genome