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CsGy5G016625 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G016625
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionTMV resistance protein N-like
Genome locationGy14Chr5:22991259..22991711
RNA-Seq ExpressionCsGy5G016625
SyntenyCsGy5G016625
Gene Ontology termsGO:0006952 - defense response (biological process)
InterPro domainsIPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039303.1 TMV resistance protein N-like [Cucumis melo var. makuwa]4.89e-5168.06Show/hide
Query:  KFPFTLGTIQSLTMLDTGGTFIDQAPNAIAGLRSLETLNCERLLKNIWWSLNDLVG-SIGVLPIRDLNLSDCNIVDEEDIRDDIKCLFLLEILDLRKNSF
        + P TL TI SLTMLD GGT ID APNAI    +LETLNCE+L +NIW SL+ LVG + GVLP+RDLNLS C + D+EDI DD+ CL  LEILDL  NSF
Subjt:  KFPFTLGTIQSLTMLDTGGTFIDQAPNAIAGLRSLETLNCERLLKNIWWSLNDLVG-SIGVLPIRDLNLSDCNIVDEEDIRDDIKCLFLLEILDLRKNSF

Query:  VRLKQSLPQLTNLIALYLNDCFNIQPQLLPKLPTSLHYVGGQNS
        V+LK+SL QLTNL ALYLNDC +IQPQLLPK  T+L YVGG NS
Subjt:  VRLKQSLPQLTNLIALYLNDCFNIQPQLLPKLPTSLHYVGGQNS
KAA0040636.1 TMV resistance protein N-like [Cucumis melo var. makuwa]3.62e-3481.18Show/hide
Query:  KFPFTLGTIQSLTMLDTGGTFIDQAPNAIAGLRSLETLNCERLLKNIWWSLNDLVGSI-GVLPIRDLNLSDCNIVDEEDIRDDIK
        + PFTLGTIQSLTMLD GGTFIDQAP+AI  LRSLETLNCERL +NIWWSL++LVGS  G+LPIRDLNLSDCN+VDE DI DDIK
Subjt:  KFPFTLGTIQSLTMLDTGGTFIDQAPNAIAGLRSLETLNCERLLKNIWWSLNDLVGSI-GVLPIRDLNLSDCNIVDEEDIRDDIK
KAE8650930.1 hypothetical protein Csa_023530, partial [Cucumis sativus]3.58e-4880.77Show/hide
Query:  KFPFTLGTIQSLTMLDTGGTFIDQAPNAIAGLRSLETLNCERLLKNIWWSLNDLVGSIGVLPIRDLNLSDCNIVDEEDIRDDIKCLFLLEILDLRKNSFV
        + PFTLGTIQSLTMLD  GTFI QAPNAI  LRSLETLNCER+ +NIWWSL DLVGS GVLPI DLN SDCN+VDE DI DDIKCL LLEILDL KNSFV
Subjt:  KFPFTLGTIQSLTMLDTGGTFIDQAPNAIAGLRSLETLNCERLLKNIWWSLNDLVGSIGVLPIRDLNLSDCNIVDEEDIRDDIKCLFLLEILDLRKNSFV

Query:  RLKQ
        RLK+
Subjt:  RLKQ
KGN51226.1 hypothetical protein Csa_008699 [Cucumis sativus]2.15e-9293.33Show/hide
Query:  MAAKTSTKFPFTLGTIQSLTMLDTGGTFIDQAPNAIAGLRSLETLNCERLLKNIWWSLNDLVGSIGVLPIRDLNLSDCNIVDEEDIRDDIKCLFLLEILD
        MAAKTSTKFPFTLGTIQSLTMLD GGTFIDQAPNAIA L+SLETLNCERL KNIWWSLNDLVGS  VLPIRDLNLSDCNIVDE DIRDDIKCLFLLEILD
Subjt:  MAAKTSTKFPFTLGTIQSLTMLDTGGTFIDQAPNAIAGLRSLETLNCERLLKNIWWSLNDLVGSIGVLPIRDLNLSDCNIVDEEDIRDDIKCLFLLEILD

Query:  LRKNSFVRLKQSLPQLTNLIALYLNDCFNIQPQLLPKLPTSLHYVGGQNS
        L KNSFVRLKQSLP+LTNLIALYLNDCFNIQPQLLPKLPTSLH VGGQNS
Subjt:  LRKNSFVRLKQSLPQLTNLIALYLNDCFNIQPQLLPKLPTSLHYVGGQNS
XP_038890297.1 TMV resistance protein N-like [Benincasa hispida]8.46e-5773.61Show/hide
Query:  KFPFTLGTIQSLTMLDTGGTFIDQAPNAIAGLRSLETLNCERLL-KNIWWSLNDLVGSIGVLPIRDLNLSDCNIVDEEDIRDDIKCLFLLEILDLRKNSF
        + PFTLG IQSLTMLD GGT +DQAP AI  L +LETLNCERL  +NIW S + L G+  VLP++DLNLSDCN+ DE DI DDIKCL LLEILDL KNSF
Subjt:  KFPFTLGTIQSLTMLDTGGTFIDQAPNAIAGLRSLETLNCERLL-KNIWWSLNDLVGSIGVLPIRDLNLSDCNIVDEEDIRDDIKCLFLLEILDLRKNSF

Query:  VRLKQSLPQLTNLIALYLNDCFNIQPQLLPKLPTSLHYVGGQNS
        V+LK+SL QL NL ALYLNDC NIQPQLLPKLPT+L YVGGQNS
Subjt:  VRLKQSLPQLTNLIALYLNDCFNIQPQLLPKLPTSLHYVGGQNS
TrEMBL top hitse value%identityAlignment
A0A0A0KU16 Uncharacterized protein1.04e-9293.33Show/hide
Query:  MAAKTSTKFPFTLGTIQSLTMLDTGGTFIDQAPNAIAGLRSLETLNCERLLKNIWWSLNDLVGSIGVLPIRDLNLSDCNIVDEEDIRDDIKCLFLLEILD
        MAAKTSTKFPFTLGTIQSLTMLD GGTFIDQAPNAIA L+SLETLNCERL KNIWWSLNDLVGS  VLPIRDLNLSDCNIVDE DIRDDIKCLFLLEILD
Subjt:  MAAKTSTKFPFTLGTIQSLTMLDTGGTFIDQAPNAIAGLRSLETLNCERLLKNIWWSLNDLVGSIGVLPIRDLNLSDCNIVDEEDIRDDIKCLFLLEILD

Query:  LRKNSFVRLKQSLPQLTNLIALYLNDCFNIQPQLLPKLPTSLHYVGGQNS
        L KNSFVRLKQSLP+LTNLIALYLNDCFNIQPQLLPKLPTSLH VGGQNS
Subjt:  LRKNSFVRLKQSLPQLTNLIALYLNDCFNIQPQLLPKLPTSLHYVGGQNS
A0A0A0L9U0 Uncharacterized protein1.47e-5483.78Show/hide
Query:  MAAKTSTKFPFTLGTIQSLTMLDTGGTFIDQAPNAIAGLRSLETLNCERLLKNIWWSLNDLVGSIGVLPIRDLNLSDCNIVDEEDIRDDIKCLFLLEILD
        MAAKTSTKFPFTLGTIQSLTMLD  GTFI QAPNAI  LRSLETLNCER+ +NIWWSL DLVGS GVLPI DLN SDCN+VDE DI DDIKCL LLEILD
Subjt:  MAAKTSTKFPFTLGTIQSLTMLDTGGTFIDQAPNAIAGLRSLETLNCERLLKNIWWSLNDLVGSIGVLPIRDLNLSDCNIVDEEDIRDDIKCLFLLEILD

Query:  LRKNSFVRLKQ
        L KNSFVRLK+
Subjt:  LRKNSFVRLKQ
A0A5A7T8K2 TMV resistance protein N-like2.37e-5168.06Show/hide
Query:  KFPFTLGTIQSLTMLDTGGTFIDQAPNAIAGLRSLETLNCERLLKNIWWSLNDLVG-SIGVLPIRDLNLSDCNIVDEEDIRDDIKCLFLLEILDLRKNSF
        + P TL TI SLTMLD GGT ID APNAI    +LETLNCE+L +NIW SL+ LVG + GVLP+RDLNLS C + D+EDI DD+ CL  LEILDL  NSF
Subjt:  KFPFTLGTIQSLTMLDTGGTFIDQAPNAIAGLRSLETLNCERLLKNIWWSLNDLVG-SIGVLPIRDLNLSDCNIVDEEDIRDDIKCLFLLEILDLRKNSF

Query:  VRLKQSLPQLTNLIALYLNDCFNIQPQLLPKLPTSLHYVGGQNS
        V+LK+SL QLTNL ALYLNDC +IQPQLLPK  T+L YVGG NS
Subjt:  VRLKQSLPQLTNLIALYLNDCFNIQPQLLPKLPTSLHYVGGQNS
A0A5A7TDI7 TMV resistance protein N-like8.98e-3051.05Show/hide
Query:  KFPFTLGTIQSLTMLDTGGTFIDQAPNAIAGLRSLETLNCERLLKNIWWSLNDLVGSIGVLPIRDLNLSDCNIVDEEDIRDDIKCLFLLEILDLRKNSFV
        K P +LG ++ L  LD GGT I   P     L +L  LNCERL  NIW SL  L     V  ++DLNLSDCN+VDE DI +D++    LEILDL  N F 
Subjt:  KFPFTLGTIQSLTMLDTGGTFIDQAPNAIAGLRSLETLNCERLLKNIWWSLNDLVGSIGVLPIRDLNLSDCNIVDEEDIRDDIKCLFLLEILDLRKNSFV

Query:  RLKQSLPQLTNLIALYLNDCFNIQPQLLPKLPTSLHYVGGQNS
        RL +S+ QL NL ALYLNDC  ++   +PKLP S+ YVGG+ S
Subjt:  RLKQSLPQLTNLIALYLNDCFNIQPQLLPKLPTSLHYVGGQNS
A0A5A7TF41 TMV resistance protein N-like1.75e-3481.18Show/hide
Query:  KFPFTLGTIQSLTMLDTGGTFIDQAPNAIAGLRSLETLNCERLLKNIWWSLNDLVGSI-GVLPIRDLNLSDCNIVDEEDIRDDIK
        + PFTLGTIQSLTMLD GGTFIDQAP+AI  LRSLETLNCERL +NIWWSL++LVGS  G+LPIRDLNLSDCN+VDE DI DDIK
Subjt:  KFPFTLGTIQSLTMLDTGGTFIDQAPNAIAGLRSLETLNCERLLKNIWWSLNDLVGSI-GVLPIRDLNLSDCNIVDEEDIRDDIK
SwissProt top hitse value%identityAlignment
V9M2S5 Disease resistance protein RPV11.0e-0434.04Show/hide
Query:  KFPFTLGTIQSLTMLDTGGTFIDQAPNAIAGLRSLETL---NCERL-----------------LKNIWWSLNDLVGSIGVL-PIRDLNLSDCNIVDEEDI
        KFP   G ++SLT LD   T I   P++I  L SLE+L   NC +                  LKN   ++ DL  SIG L  +  LNLSDC     E  
Subjt:  KFPFTLGTIQSLTMLDTGGTFIDQAPNAIAGLRSLETL---NCERL-----------------LKNIWWSLNDLVGSIGVL-PIRDLNLSDCNIVDEEDI

Query:  RDDIKCLFLLEILDLRKNSFVRLKQSLPQLTNLIALYLNDC
         +    +  L+ LDL+  +   L  S+  L +L  L L+DC
Subjt:  RDDIKCLFLLEILDLRKNSFVRLKQSLPQLTNLIALYLNDC
Arabidopsis top hitse value%identityAlignment
AT5G36930.1 Disease resistance protein (TIR-NBS-LRR class) family8.9e-0936.3Show/hide
Query:  LGTIQSLTMLDTGGTFIDQAPNAIAGLRSLETLN---CERLL----------KNIWWSLNDLVGSIGVLPIRDLNLSDCNIVDEEDIRDDIKCLFLLEIL
        LG ++SLT L    T + + P+ I  L+ L+ L+   C+ LL          K+   SL   V   G+  +R L+L  CN+ DE  I +DI  L  L  L
Subjt:  LGTIQSLTMLDTGGTFIDQAPNAIAGLRSLETLN---CERLL----------KNIWWSLNDLVGSIGVLPIRDLNLSDCNIVDEEDIRDDIKCLFLLEIL

Query:  DLRKNSFVRLKQSLPQLTNLIALYLNDCFNIQPQLLPKLPTSLHYV
        DLR NSF  L      L NL  L L+DC  +Q  L   LP SL ++
Subjt:  DLRKNSFVRLKQSLPQLTNLIALYLNDCFNIQPQLLPKLPTSLHYV
AT5G36930.2 Disease resistance protein (TIR-NBS-LRR class) family8.9e-0936.3Show/hide
Query:  LGTIQSLTMLDTGGTFIDQAPNAIAGLRSLETLN---CERLL----------KNIWWSLNDLVGSIGVLPIRDLNLSDCNIVDEEDIRDDIKCLFLLEIL
        LG ++SLT L    T + + P+ I  L+ L+ L+   C+ LL          K+   SL   V   G+  +R L+L  CN+ DE  I +DI  L  L  L
Subjt:  LGTIQSLTMLDTGGTFIDQAPNAIAGLRSLETLN---CERLL----------KNIWWSLNDLVGSIGVLPIRDLNLSDCNIVDEEDIRDDIKCLFLLEIL

Query:  DLRKNSFVRLKQSLPQLTNLIALYLNDCFNIQPQLLPKLPTSLHYV
        DLR NSF  L      L NL  L L+DC  +Q  L   LP SL ++
Subjt:  DLRKNSFVRLKQSLPQLTNLIALYLNDCFNIQPQLLPKLPTSLHYV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCAAAAACCTCCACCAAATTTCCTTTCACTTTGGGGACAATACAATCTCTTACCATGCTTGACACTGGAGGAACATTTATAGATCAAGCACCAAATGCT
ATCGCTGGTTTAAGGAGTCTTGAAACTTTGAATTGTGAAAGGCTTTTAAAAAATATTTGGTGGTCATTGAATGATTTGGTTGGGAGTATTGGTGTTTTGCCTATT
AGAGATTTGAATCTAAGTGATTGCAATATTGTGGACGAAGAAGATATTCGTGATGATATCAAATGTCTTTTCTTATTGGAAATTCTTGACCTTAGAAAAAATTCT
TTTGTAAGGCTCAAACAAAGCCTCCCCCAACTTACTAACTTAATAGCATTGTACTTGAATGATTGCTTCAACATTCAGCCACAACTATTGCCAAAGCTTCCAACA
AGTTTGCATTATGTGGGAGGACAAAACTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCAAAAACCTCCACCAAATTTCCTTTCACTTTGGGGACAATACAATCTCTTACCATGCTTGACACTGGAGGAACATTTATAGATCAAGCACCAAATGCT
ATCGCTGGTTTAAGGAGTCTTGAAACTTTGAATTGTGAAAGGCTTTTAAAAAATATTTGGTGGTCATTGAATGATTTGGTTGGGAGTATTGGTGTTTTGCCTATT
AGAGATTTGAATCTAAGTGATTGCAATATTGTGGACGAAGAAGATATTCGTGATGATATCAAATGTCTTTTCTTATTGGAAATTCTTGACCTTAGAAAAAATTCT
TTTGTAAGGCTCAAACAAAGCCTCCCCCAACTTACTAACTTAATAGCATTGTACTTGAATGATTGCTTCAACATTCAGCCACAACTATTGCCAAAGCTTCCAACA
AGTTTGCATTATGTGGGAGGACAAAACTCATAA
Protein sequenceShow/hide protein sequence
MAAKTSTKFPFTLGTIQSLTMLDTGGTFIDQAPNAIAGLRSLETLNCERLLKNIWWSLNDLVGSIGVLPIRDLNLSDCNIVDEEDIRDDIKCLFLLEILDLRKNS
FVRLKQSLPQLTNLIALYLNDCFNIQPQLLPKLPTSLHYVGGQNS