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CsGy5G017873 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G017873
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionKirola-like
Genome locationGy14Chr5:24044837..24045394
RNA-Seq ExpressionCsGy5G017873
SyntenyCsGy5G017873
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006749 - glutathione metabolic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041480.1 kirola-like [Cucumis melo var. makuwa]4.00e-1561.11Show/hide
Query:  LHVLPPNFGRPPLLLSSNLYALPPTDLGYHLDVKNPQTSSLRLA--NLRHIPDNVQTSS---GMSDQQLDGL
        +HVLPPN GRPPLLL SNLYALPP DL YH DV+NPQ  S+     +L H   N+Q SS   G+S QQL GL
Subjt:  LHVLPPNFGRPPLLLSSNLYALPPTDLGYHLDVKNPQTSSLRLA--NLRHIPDNVQTSS---GMSDQQLDGL

KAA0047786.1 chloride channel protein CLC-e [Cucumis melo var. makuwa]2.79e-1142.34Show/hide
Query:  GATHTGPSSSDSVDHPTCVTLF--FI------CDLYCSPCLLHVLPPNFGRPPLLLSSNLYALPPTDLGYHLDVKNPQTSSLRLANLRHIPDNVQ---TS
          +HT PS    + HP  + L   F+           S   +HVL PN G+PPLLL SNLYALPPT L YHLDVKN Q  S           N+    +S
Subjt:  GATHTGPSSSDSVDHPTCVTLF--FI------CDLYCSPCLLHVLPPNFGRPPLLLSSNLYALPPTDLGYHLDVKNPQTSSLRLANLRHIPDNVQ---TS

Query:  SGMSDQQLDGL
         G++ QQL+GL
Subjt:  SGMSDQQLDGL

KAA0050981.1 kirola-like [Cucumis melo var. makuwa]2.29e-1650.49Show/hide
Query:  GPSSSDSVDHPTCVTLFFICDLYCSPCLLHVLPPNFGRPPLLLSSNLYALPPTDLGYHLDVKNPQT-------SSLRLANLRHIPDNVQTSS-GMSDQQL
         PSSSDS +HP C TLFFI         + VLPPNF  PP LL SNLY LP ++L Y+ D KNPQ         SL L+N      NVQTSS G++ QQL
Subjt:  GPSSSDSVDHPTCVTLFFICDLYCSPCLLHVLPPNFGRPPLLLSSNLYALPPTDLGYHLDVKNPQT-------SSLRLANLRHIPDNVQTSS-GMSDQQL

Query:  DGL
        + L
Subjt:  DGL

TYK01068.1 chloride channel protein CLC-e [Cucumis melo var. makuwa]1.11e-1144.14Show/hide
Query:  GATHTGPSSSDSVDHPTCVTLFF--------ICDLYCSPCLLHVLPPNFGRPPLLLSSNLYALPPTDLGYHLDVKNPQT-SSLRLANLRHIPD-NVQTSS
          +HT PS    + HP  + L                S   +HVL PN G+PPLLL SNLYALPPT L YHLDVKN Q  S+  +       D N+Q SS
Subjt:  GATHTGPSSSDSVDHPTCVTLFF--------ICDLYCSPCLLHVLPPNFGRPPLLLSSNLYALPPTDLGYHLDVKNPQT-SSLRLANLRHIPD-NVQTSS

Query:  -GMSDQQLDGL
         G++ QQL+GL
Subjt:  -GMSDQQLDGL

TYK24354.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]1.50e-1461.11Show/hide
Query:  LHVLPPNFGRPPLLLSSNLYALPPTDLGYHLDVKNPQTSSLRLA--NLRHIPDNVQTSS---GMSDQQLDGL
        +HVLPPN GRPPLLL SNLYALPP DL YH DV+NPQ  S+     +L H   N+Q SS   G+S QQL GL
Subjt:  LHVLPPNFGRPPLLLSSNLYALPPTDLGYHLDVKNPQTSSLRLA--NLRHIPDNVQTSS---GMSDQQLDGL

TrEMBL top hitse value%identityAlignment
A0A5A7TDW1 Kirola-like1.94e-1561.11Show/hide
Query:  LHVLPPNFGRPPLLLSSNLYALPPTDLGYHLDVKNPQTSSLRLA--NLRHIPDNVQTSS---GMSDQQLDGL
        +HVLPPN GRPPLLL SNLYALPP DL YH DV+NPQ  S+     +L H   N+Q SS   G+S QQL GL
Subjt:  LHVLPPNFGRPPLLLSSNLYALPPTDLGYHLDVKNPQTSSLRLA--NLRHIPDNVQTSS---GMSDQQLDGL

A0A5A7U0M6 Chloride channel protein1.35e-1142.34Show/hide
Query:  GATHTGPSSSDSVDHPTCVTLF--FI------CDLYCSPCLLHVLPPNFGRPPLLLSSNLYALPPTDLGYHLDVKNPQTSSLRLANLRHIPDNVQ---TS
          +HT PS    + HP  + L   F+           S   +HVL PN G+PPLLL SNLYALPPT L YHLDVKN Q  S           N+    +S
Subjt:  GATHTGPSSSDSVDHPTCVTLF--FI------CDLYCSPCLLHVLPPNFGRPPLLLSSNLYALPPTDLGYHLDVKNPQTSSLRLANLRHIPDNVQ---TS

Query:  SGMSDQQLDGL
         G++ QQL+GL
Subjt:  SGMSDQQLDGL

A0A5D3BPS9 Chloride channel protein5.38e-1244.14Show/hide
Query:  GATHTGPSSSDSVDHPTCVTLFF--------ICDLYCSPCLLHVLPPNFGRPPLLLSSNLYALPPTDLGYHLDVKNPQT-SSLRLANLRHIPD-NVQTSS
          +HT PS    + HP  + L                S   +HVL PN G+PPLLL SNLYALPPT L YHLDVKN Q  S+  +       D N+Q SS
Subjt:  GATHTGPSSSDSVDHPTCVTLFF--------ICDLYCSPCLLHVLPPNFGRPPLLLSSNLYALPPTDLGYHLDVKNPQT-SSLRLANLRHIPD-NVQTSS

Query:  -GMSDQQLDGL
         G++ QQL+GL
Subjt:  -GMSDQQLDGL

A0A5D3CEE0 Kirola-like1.11e-1650.49Show/hide
Query:  GPSSSDSVDHPTCVTLFFICDLYCSPCLLHVLPPNFGRPPLLLSSNLYALPPTDLGYHLDVKNPQT-------SSLRLANLRHIPDNVQTSS-GMSDQQL
         PSSSDS +HP C TLFFI         + VLPPNF  PP LL SNLY LP ++L Y+ D KNPQ         SL L+N      NVQTSS G++ QQL
Subjt:  GPSSSDSVDHPTCVTLFFICDLYCSPCLLHVLPPNFGRPPLLLSSNLYALPPTDLGYHLDVKNPQT-------SSLRLANLRHIPDNVQTSS-GMSDQQL

Query:  DGL
        + L
Subjt:  DGL

A0A5D3DL79 Transposon Tf2-1 polyprotein isoform X17.27e-1561.11Show/hide
Query:  LHVLPPNFGRPPLLLSSNLYALPPTDLGYHLDVKNPQTSSLRLA--NLRHIPDNVQTSS---GMSDQQLDGL
        +HVLPPN GRPPLLL SNLYALPP DL YH DV+NPQ  S+     +L H   N+Q SS   G+S QQL GL
Subjt:  LHVLPPNFGRPPLLLSSNLYALPPTDLGYHLDVKNPQTSSLRLA--NLRHIPDNVQTSS---GMSDQQLDGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGTTTTGATTCCTATTTCTATAGTTGTAGTAAAAGGAATTGGTACTTTTAAGTGTAAAAATGAAAAAGTTATAATCGGATCAACGTTGCCATGGACGAATGGTTC
CATTGCCTTCAGACAATGTTGGCCAGTGCATTTTCGTCAATTTTGTAGTCGTTCACACTGCCAAACGTGCTGTCACGTCTCACCCATGTGCCACTGTCAGACCTTTATGT
GTCGTTGCACGTGTTGTTGCATGCATTGTCGTATTGGAGCTACACACACTGGTCCTTCCTCCTCAGATAGCGTCGACCATCCAACTTGTGTAACCCTCTTCTTCATCTGC
GACCTATATTGCTCCCCATGTCTGCTTCATGTATTGCCACCTAATTTTGGACGGCCACCACTACTTTTGTCATCCAATTTGTATGCCTTGCCACCCACTGACCTAGGTTA
TCATCTCGATGTTAAGAATCCTCAAACTTCCTCTTTGAGATTGGCAAATCTTCGGCACATTCCAGATAACGTGCAAACTTCTTCAGGAATGTCTGATCAACAACTGGATG
GGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGTTTTGATTCCTATTTCTATAGTTGTAGTAAAAGGAATTGGTACTTTTAAGTGTAAAAATGAAAAAGTTATAATCGGATCAACGTTGCCATGGACGAATGGTTC
CATTGCCTTCAGACAATGTTGGCCAGTGCATTTTCGTCAATTTTGTAGTCGTTCACACTGCCAAACGTGCTGTCACGTCTCACCCATGTGCCACTGTCAGACCTTTATGT
GTCGTTGCACGTGTTGTTGCATGCATTGTCGTATTGGAGCTACACACACTGGTCCTTCCTCCTCAGATAGCGTCGACCATCCAACTTGTGTAACCCTCTTCTTCATCTGC
GACCTATATTGCTCCCCATGTCTGCTTCATGTATTGCCACCTAATTTTGGACGGCCACCACTACTTTTGTCATCCAATTTGTATGCCTTGCCACCCACTGACCTAGGTTA
TCATCTCGATGTTAAGAATCCTCAAACTTCCTCTTTGAGATTGGCAAATCTTCGGCACATTCCAGATAACGTGCAAACTTCTTCAGGAATGTCTGATCAACAACTGGATG
GGCTTTGA
Protein sequenceShow/hide protein sequence
MEVLIPISIVVVKGIGTFKCKNEKVIIGSTLPWTNGSIAFRQCWPVHFRQFCSRSHCQTCCHVSPMCHCQTFMCRCTCCCMHCRIGATHTGPSSSDSVDHPTCVTLFFIC
DLYCSPCLLHVLPPNFGRPPLLLSSNLYALPPTDLGYHLDVKNPQTSSLRLANLRHIPDNVQTSSGMSDQQLDGL