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CsGy5G017900 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G017900
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionYcf20-like protein isoform X1
Genome locationGy14Chr5:24081054..24082152
RNA-Seq ExpressionCsGy5G017900
SyntenyCsGy5G017900
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007572 - Uncharacterised protein family Ycf20


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055154.1 ycf20-like protein isoform X1 [Cucumis melo var. makuwa]7.05e-2053.21Show/hide
Query:  MNPSYWRYDMVQSRPSPPRRFST-----------------LDSCLS-------SREITF------------ETISLSFGALGVNDVFAAVVYVLLTKYVT
        MNPSYWRYDMV+SRPSPPR F                   L   LS       SR   F            +TISLSFGALGVNDV AAVV VLLT+YVT
Subjt:  MNPSYWRYDMVQSRPSPPRRFST-----------------LDSCLS-------SREITF------------ETISLSFGALGVNDVFAAVVYVLLTKYVT

Query:  RFYYSRPKL
        RFYYSRPK+
Subjt:  RFYYSRPKL
KAE8648556.1 hypothetical protein Csa_009133, partial [Cucumis sativus]2.66e-3283.56Show/hide
Query:  MNPSYWRYDMVQSRPSPPRRFSTLDSCLSSREITFETISLSFGALGVNDVFAAVVYVLLTKYVTRFYYSRPKL
        MNPSYWRYDMVQSRP PPRRFSTLDSCLSSREITF+TISLSFGALGVNDVFAAVVYVLLT        +RPK+
Subjt:  MNPSYWRYDMVQSRPSPPRRFSTLDSCLSSREITFETISLSFGALGVNDVFAAVVYVLLTKYVTRFYYSRPKL
XP_004143642.1 uncharacterized protein ycf20 [Cucumis sativus]1.17e-1953.21Show/hide
Query:  MNPSYWRYDMVQSRPSPPRRFST-----------------LDSCLS-------SREITF------------ETISLSFGALGVNDVFAAVVYVLLTKYVT
        MNPSYWRYDMV+SRPSPPR F                   L   LS       SR   F            +TISLSFGALGVNDV AAVV VLLT+YVT
Subjt:  MNPSYWRYDMVQSRPSPPRRFST-----------------LDSCLS-------SREITF------------ETISLSFGALGVNDVFAAVVYVLLTKYVT

Query:  RFYYSRPKL
        RFYYSRPK+
Subjt:  RFYYSRPKL
XP_008467247.1 PREDICTED: uncharacterized protein LOC103504644 isoform X2 [Cucumis melo]1.01e-1950Show/hide
Query:  MNPSYWRYDMVQSRPSPPRRFST-----------------LDSCLS-------SREITF------------ETISLSFGALGVNDVFAAVVYVLLTKYVT
        MN SYWRYDMV+SRPSPPR F                   L   LS       SR   F            +TISLSFGALGVNDV AAVV VLLT+YVT
Subjt:  MNPSYWRYDMVQSRPSPPRRFST-----------------LDSCLS-------SREITF------------ETISLSFGALGVNDVFAAVVYVLLTKYVT

Query:  RFYYSRPKLNHLKQIVAREKQL
        RFYYSRPK   L  IV ++ Q+
Subjt:  RFYYSRPKLNHLKQIVAREKQL
XP_008467248.1 PREDICTED: uncharacterized protein LOC103504644 isoform X3 [Cucumis melo]1.79e-1852.78Show/hide
Query:  MNPSYWRYDMVQSRPSPPRRFST-----------------LDSCLS-------SREITF------------ETISLSFGALGVNDVFAAVVYVLLTKYVT
        MN SYWRYDMV+SRPSPPR F                   L   LS       SR   F            +TISLSFGALGVNDV AAVV VLLT+YVT
Subjt:  MNPSYWRYDMVQSRPSPPRRFST-----------------LDSCLS-------SREITF------------ETISLSFGALGVNDVFAAVVYVLLTKYVT

Query:  RFYYSRPK
        RFYYSRPK
Subjt:  RFYYSRPK
TrEMBL top hitse value%identityAlignment
A0A0A0KPS1 Uncharacterized protein5.68e-2053.21Show/hide
Query:  MNPSYWRYDMVQSRPSPPRRFST-----------------LDSCLS-------SREITF------------ETISLSFGALGVNDVFAAVVYVLLTKYVT
        MNPSYWRYDMV+SRPSPPR F                   L   LS       SR   F            +TISLSFGALGVNDV AAVV VLLT+YVT
Subjt:  MNPSYWRYDMVQSRPSPPRRFST-----------------LDSCLS-------SREITF------------ETISLSFGALGVNDVFAAVVYVLLTKYVT

Query:  RFYYSRPKL
        RFYYSRPK+
Subjt:  RFYYSRPKL
A0A0A0KUE6 Uncharacterized protein1.23e-3396.72Show/hide
Query:  MNPSYWRYDMVQSRPSPPRRFSTLDSCLSSREITFETISLSFGALGVNDVFAAVVYVLLTK
        MNPSYWRYDMVQSRP PPRRFSTLDSCLSSREITF+TISLSFGALGVNDVFAAVVYVLLTK
Subjt:  MNPSYWRYDMVQSRPSPPRRFSTLDSCLSSREITFETISLSFGALGVNDVFAAVVYVLLTK
A0A1S3CTA6 uncharacterized protein LOC103504644 isoform X24.89e-2050Show/hide
Query:  MNPSYWRYDMVQSRPSPPRRFST-----------------LDSCLS-------SREITF------------ETISLSFGALGVNDVFAAVVYVLLTKYVT
        MN SYWRYDMV+SRPSPPR F                   L   LS       SR   F            +TISLSFGALGVNDV AAVV VLLT+YVT
Subjt:  MNPSYWRYDMVQSRPSPPRRFST-----------------LDSCLS-------SREITF------------ETISLSFGALGVNDVFAAVVYVLLTKYVT

Query:  RFYYSRPKLNHLKQIVAREKQL
        RFYYSRPK   L  IV ++ Q+
Subjt:  RFYYSRPKLNHLKQIVAREKQL
A0A1S3CUD8 uncharacterized protein LOC103504644 isoform X38.65e-1952.78Show/hide
Query:  MNPSYWRYDMVQSRPSPPRRFST-----------------LDSCLS-------SREITF------------ETISLSFGALGVNDVFAAVVYVLLTKYVT
        MN SYWRYDMV+SRPSPPR F                   L   LS       SR   F            +TISLSFGALGVNDV AAVV VLLT+YVT
Subjt:  MNPSYWRYDMVQSRPSPPRRFST-----------------LDSCLS-------SREITF------------ETISLSFGALGVNDVFAAVVYVLLTKYVT

Query:  RFYYSRPK
        RFYYSRPK
Subjt:  RFYYSRPK
A0A5D3BMH1 Ycf20-like protein isoform X13.41e-2053.21Show/hide
Query:  MNPSYWRYDMVQSRPSPPRRFST-----------------LDSCLS-------SREITF------------ETISLSFGALGVNDVFAAVVYVLLTKYVT
        MNPSYWRYDMV+SRPSPPR F                   L   LS       SR   F            +TISLSFGALGVNDV AAVV VLLT+YVT
Subjt:  MNPSYWRYDMVQSRPSPPRRFST-----------------LDSCLS-------SREITF------------ETISLSFGALGVNDVFAAVVYVLLTKYVT

Query:  RFYYSRPKL
        RFYYSRPK+
Subjt:  RFYYSRPKL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G43050.1 Protein of unknown function (DUF565)1.5e-0985.71Show/hide
Query:  ETISLSFGALGVNDVFAAVVYVLLTKYVTRFYYSR
        +TISLSFGALGVNDV AAV+ VLLT+YVTRFYYSR
Subjt:  ETISLSFGALGVNDVFAAVVYVLLTKYVTRFYYSR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCCTTCATATTGGAGATACGATATGGTTCAATCACGACCTTCCCCTCCACGTAGGTTCTCAACATTAGACTCGTGCCTGAGCTCTCGAGAAATTACTTTCGAAAC
TATCTCATTGTCATTTGGAGCTTTAGGAGTAAATGATGTTTTTGCTGCTGTGGTATACGTTCTCCTTACCAAGTATGTTACTCGATTTTATTACAGTCGACCAAAGCTCA
ACCATCTGAAACAAATCGTTGCTCGAGAGAAGCAGTTGAACCAAAACAAGCAACCAAAAAGGAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATCCTTCATATTGGAGATACGATATGGTTCAATCACGACCTTCCCCTCCACGTAGGTTCTCAACATTAGACTCGTGCCTGAGCTCTCGAGAAATTACTTTCGAAAC
TATCTCATTGTCATTTGGAGCTTTAGGAGTAAATGATGTTTTTGCTGCTGTGGTATACGTTCTCCTTACCAAGTATGTTACTCGATTTTATTACAGTCGACCAAAGCTCA
ACCATCTGAAACAAATCGTTGCTCGAGAGAAGCAGTTGAACCAAAACAAGCAACCAAAAAGGAGTTGA
Protein sequenceShow/hide protein sequence
MNPSYWRYDMVQSRPSPPRRFSTLDSCLSSREITFETISLSFGALGVNDVFAAVVYVLLTKYVTRFYYSRPKLNHLKQIVAREKQLNQNKQPKRS