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CsGy5G018267 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G018267
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionGirdin-like
Genome locationGy14Chr5:24427384..24427740
RNA-Seq ExpressionCsGy5G018267
SyntenyCsGy5G018267
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032013.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]4.54e-2955.77Show/hide
Query:  SPLTYRCGQLLFISLLGLWGGIAYSPLLVLHQTWSKQFASVIYGLEDWDFSYEADEMIVKVQEVIETWKVVRRLKSLRHCKGTTNQYDIWRADRNGFEFA
        +PL ++ G    I L+G  GGIAYSPLLVL Q+WSKQFA V+ GLEDW+FSYE++    K+ E +E WK V+++KSLRHC+GTT QYD WRA RNG    
Subjt:  SPLTYRCGQLLFISLLGLWGGIAYSPLLVLHQTWSKQFASVIYGLEDWDFSYEADEMIVKVQEVIETWKVVRRLKSLRHCKGTTNQYDIWRADRNGFEFA

Query:  TIPQ
         + +
Subjt:  TIPQ

KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]6.74e-2952.78Show/hide
Query:  WVPKSPLTYRCGQLLFISLLGLWGGIAYSPLLVLHQTWSKQFASVIYGLEDWDFSYEADEMIVKVQEVIETWKVVRRLKSLRHCKGTTNQYDIWRADRNG
        W PK P     G           GGIAYSPLLVL Q+WSKQFA V+ GLEDW+FSYE++    K+ E +E WK V+++KSLRHC+GTT QYD WRA RNG
Subjt:  WVPKSPLTYRCGQLLFISLLGLWGGIAYSPLLVLHQTWSKQFASVIYGLEDWDFSYEADEMIVKVQEVIETWKVVRRLKSLRHCKGTTNQYDIWRADRNG

Query:  FEFATIPQ
             + +
Subjt:  FEFATIPQ

KAA0046902.1 girdin-like [Cucumis melo var. makuwa]7.49e-2539.62Show/hide
Query:  KEIVWRSLWVPKSPLTYRCGQLLFISLLGLWGGIAYSPLLVLHQTWSKQFASVIYGLEDWDFSYEADEMIVKVQEVIETWKVVRRLKSLRHCKGTTNQYD
        + ++W++ W+P   + YRCG    + LLG WGG+ Y+PLLVL Q W KQF    + L++ DFSY+ ++   K  + + TWK +R++K   H +G T+ Y+
Subjt:  KEIVWRSLWVPKSPLTYRCGQLLFISLLGLWGGIAYSPLLVLHQTWSKQFASVIYGLEDWDFSYEADEMIVKVQEVIETWKVVRRLKSLRHCKGTTNQYD

Query:  IWRADR
         W+A+R
Subjt:  IWRADR

KGN51408.1 hypothetical protein Csa_007736 [Cucumis sativus]7.07e-85100Show/hide
Query:  MKEIVWRSLWVPKSPLTYRCGQLLFISLLGLWGGIAYSPLLVLHQTWSKQFASVIYGLEDWDFSYEADEMIVKVQEVIETWKVVRRLKSLRHCKGTTNQY
        MKEIVWRSLWVPKSPLTYRCGQLLFISLLGLWGGIAYSPLLVLHQTWSKQFASVIYGLEDWDFSYEADEMIVKVQEVIETWKVVRRLKSLRHCKGTTNQY
Subjt:  MKEIVWRSLWVPKSPLTYRCGQLLFISLLGLWGGIAYSPLLVLHQTWSKQFASVIYGLEDWDFSYEADEMIVKVQEVIETWKVVRRLKSLRHCKGTTNQY

Query:  DIWRADRNGFEFATIPQY
        DIWRADRNGFEFATIPQY
Subjt:  DIWRADRNGFEFATIPQY

TYK16834.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]3.38e-4159.48Show/hide
Query:  EIVWRSLWVPKSPLTYRCGQLLFISLLGLWGG-IAYSPLLVLHQTWSKQFASVIYGLEDWDFSYEADEMIVKVQEVIETWKVVRRLKSLRHCKGTTNQYD
        + +WR+ W+  SPLT+RCG+L  I LLGLWGG IAYSPLLVL Q+WSKQFA V+ GLEDW+FSYE++    K+ E +E WK V+++KSLRHC+GTT QYD
Subjt:  EIVWRSLWVPKSPLTYRCGQLLFISLLGLWGG-IAYSPLLVLHQTWSKQFASVIYGLEDWDFSYEADEMIVKVQEVIETWKVVRRLKSLRHCKGTTNQYD

Query:  IWRADRNGFEFATIPQ
         WRA RNG     + +
Subjt:  IWRADRNGFEFATIPQ

TrEMBL top hitse value%identityAlignment
A0A0A0KP72 Uncharacterized protein3.42e-85100Show/hide
Query:  MKEIVWRSLWVPKSPLTYRCGQLLFISLLGLWGGIAYSPLLVLHQTWSKQFASVIYGLEDWDFSYEADEMIVKVQEVIETWKVVRRLKSLRHCKGTTNQY
        MKEIVWRSLWVPKSPLTYRCGQLLFISLLGLWGGIAYSPLLVLHQTWSKQFASVIYGLEDWDFSYEADEMIVKVQEVIETWKVVRRLKSLRHCKGTTNQY
Subjt:  MKEIVWRSLWVPKSPLTYRCGQLLFISLLGLWGGIAYSPLLVLHQTWSKQFASVIYGLEDWDFSYEADEMIVKVQEVIETWKVVRRLKSLRHCKGTTNQY

Query:  DIWRADRNGFEFATIPQY
        DIWRADRNGFEFATIPQY
Subjt:  DIWRADRNGFEFATIPQY

A0A5A7SNY0 Glial fibrillary acidic protein-like2.20e-2955.77Show/hide
Query:  SPLTYRCGQLLFISLLGLWGGIAYSPLLVLHQTWSKQFASVIYGLEDWDFSYEADEMIVKVQEVIETWKVVRRLKSLRHCKGTTNQYDIWRADRNGFEFA
        +PL ++ G    I L+G  GGIAYSPLLVL Q+WSKQFA V+ GLEDW+FSYE++    K+ E +E WK V+++KSLRHC+GTT QYD WRA RNG    
Subjt:  SPLTYRCGQLLFISLLGLWGGIAYSPLLVLHQTWSKQFASVIYGLEDWDFSYEADEMIVKVQEVIETWKVVRRLKSLRHCKGTTNQYDIWRADRNGFEFA

Query:  TIPQ
         + +
Subjt:  TIPQ

A0A5A7SUT0 Reverse transcriptase3.26e-2952.78Show/hide
Query:  WVPKSPLTYRCGQLLFISLLGLWGGIAYSPLLVLHQTWSKQFASVIYGLEDWDFSYEADEMIVKVQEVIETWKVVRRLKSLRHCKGTTNQYDIWRADRNG
        W PK P     G           GGIAYSPLLVL Q+WSKQFA V+ GLEDW+FSYE++    K+ E +E WK V+++KSLRHC+GTT QYD WRA RNG
Subjt:  WVPKSPLTYRCGQLLFISLLGLWGGIAYSPLLVLHQTWSKQFASVIYGLEDWDFSYEADEMIVKVQEVIETWKVVRRLKSLRHCKGTTNQYDIWRADRNG

Query:  FEFATIPQ
             + +
Subjt:  FEFATIPQ

A0A5D3BYI1 Girdin-like3.62e-2539.62Show/hide
Query:  KEIVWRSLWVPKSPLTYRCGQLLFISLLGLWGGIAYSPLLVLHQTWSKQFASVIYGLEDWDFSYEADEMIVKVQEVIETWKVVRRLKSLRHCKGTTNQYD
        + ++W++ W+P   + YRCG    + LLG WGG+ Y+PLLVL Q W KQF    + L++ DFSY+ ++   K  + + TWK +R++K   H +G T+ Y+
Subjt:  KEIVWRSLWVPKSPLTYRCGQLLFISLLGLWGGIAYSPLLVLHQTWSKQFASVIYGLEDWDFSYEADEMIVKVQEVIETWKVVRRLKSLRHCKGTTNQYD

Query:  IWRADR
         W+A+R
Subjt:  IWRADR

A0A5D3D0S2 Glial fibrillary acidic protein-like1.63e-4159.48Show/hide
Query:  EIVWRSLWVPKSPLTYRCGQLLFISLLGLWGG-IAYSPLLVLHQTWSKQFASVIYGLEDWDFSYEADEMIVKVQEVIETWKVVRRLKSLRHCKGTTNQYD
        + +WR+ W+  SPLT+RCG+L  I LLGLWGG IAYSPLLVL Q+WSKQFA V+ GLEDW+FSYE++    K+ E +E WK V+++KSLRHC+GTT QYD
Subjt:  EIVWRSLWVPKSPLTYRCGQLLFISLLGLWGG-IAYSPLLVLHQTWSKQFASVIYGLEDWDFSYEADEMIVKVQEVIETWKVVRRLKSLRHCKGTTNQYD

Query:  IWRADRNGFEFATIPQ
         WRA RNG     + +
Subjt:  IWRADRNGFEFATIPQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGAAATAGTCTGGAGATCACTGTGGGTGCCAAAAAGTCCTTTAACATATCGTTGCGGACAATTGCTATTTATCTCACTTTTAGGCTTATGGGGAGGGATTGCCTA
TTCTCCTTTATTGGTATTGCACCAGACATGGTCTAAACAATTTGCATCAGTCATCTATGGGTTAGAAGATTGGGATTTTTCGTACGAGGCTGATGAGATGATTGTCAAGG
TGCAAGAAGTGATAGAAACATGGAAGGTTGTCAGAAGATTAAAGAGTCTGCGACATTGTAAGGGTACTACAAATCAGTACGACATTTGGAGAGCCGATAGAAATGGATTT
GAATTTGCTACAATTCCACAATATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGAAATAGTCTGGAGATCACTGTGGGTGCCAAAAAGTCCTTTAACATATCGTTGCGGACAATTGCTATTTATCTCACTTTTAGGCTTATGGGGAGGGATTGCCTA
TTCTCCTTTATTGGTATTGCACCAGACATGGTCTAAACAATTTGCATCAGTCATCTATGGGTTAGAAGATTGGGATTTTTCGTACGAGGCTGATGAGATGATTGTCAAGG
TGCAAGAAGTGATAGAAACATGGAAGGTTGTCAGAAGATTAAAGAGTCTGCGACATTGTAAGGGTACTACAAATCAGTACGACATTTGGAGAGCCGATAGAAATGGATTT
GAATTTGCTACAATTCCACAATATTAA
Protein sequenceShow/hide protein sequence
MKEIVWRSLWVPKSPLTYRCGQLLFISLLGLWGGIAYSPLLVLHQTWSKQFASVIYGLEDWDFSYEADEMIVKVQEVIETWKVVRRLKSLRHCKGTTNQYDIWRADRNGF
EFATIPQY