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CsGy5G018436 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G018436
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionBeta-galactosidase
Genome locationGy14Chr5:24818282..24818662
RNA-Seq ExpressionCsGy5G018436
SyntenyCsGy5G018436
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0016301 - kinase activity (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037935.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.90e-4282.02Show/hide
Query:  MLGCRPTDTSIDFNRKLGNSYDQVSVDKESYQCLVGKLIYLSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMFRK
        MLGC P DTSI+FN KLGNS DQV VDKE YQCLVGKLIYLSHTR DISF VSVV+QFMQ P+E+HM+AVN+ILRYLK+TPGKGLMFRK
Subjt:  MLGCRPTDTSIDFNRKLGNSYDQVSVDKESYQCLVGKLIYLSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMFRK

KAA0048502.1 reverse transcriptase [Cucumis melo var. makuwa]3.51e-4282.02Show/hide
Query:  MLGCRPTDTSIDFNRKLGNSYDQVSVDKESYQCLVGKLIYLSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMFRK
        MLGCRP DT I+FN KLGNS DQV VDKE YQ LVGKLIYLS TRPDISFVVSVVSQFMQ P E+HM+AVN+ILRYLK+TPG GLMFRK
Subjt:  MLGCRPTDTSIDFNRKLGNSYDQVSVDKESYQCLVGKLIYLSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMFRK

TYK05138.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.19e-4283.15Show/hide
Query:  MLGCRPTDTSIDFNRKLGNSYDQVSVDKESYQCLVGKLIYLSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMFRK
        MLGCRP DT I+FN KLGNS DQV VDKE YQ LVGKLIYLSHTRPDISF VSVVSQFMQ P E+HM+AVN+ILRYLK+TPGKGLMFRK
Subjt:  MLGCRPTDTSIDFNRKLGNSYDQVSVDKESYQCLVGKLIYLSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMFRK

XP_031740860.1 uncharacterized protein LOC116403658 [Cucumis sativus]1.72e-4589.89Show/hide
Query:  MLGCRPTDTSIDFNRKLGNSYDQVSVDKESYQCLVGKLIYLSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMFRK
        MLGCRPTDT I+FN KLGNS DQV VDKE YQ LVGKLIYLSHTRPDISF VSVVSQFMQTPNEEHMKAVN+ILRYLKSTPGKGLMFRK
Subjt:  MLGCRPTDTSIDFNRKLGNSYDQVSVDKESYQCLVGKLIYLSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMFRK

XP_031741968.1 uncharacterized protein LOC116403980 [Cucumis sativus]8.79e-4589.89Show/hide
Query:  MLGCRPTDTSIDFNRKLGNSYDQVSVDKESYQCLVGKLIYLSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMFRK
        MLGCRPTDT I+FN KLGNS DQV VDKE YQ LVGKLIYLSHTRPDISF VSVVSQFMQTPNEEHMKAVN+ILRYLKSTPGKGLMFRK
Subjt:  MLGCRPTDTSIDFNRKLGNSYDQVSVDKESYQCLVGKLIYLSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMFRK

TrEMBL top hitse value%identityAlignment
A0A5A7TB91 Putative mitochondrial protein6.75e-4283.15Show/hide
Query:  MLGCRPTDTSIDFNRKLGNSYDQVSVDKESYQCLVGKLIYLSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMFRK
        MLGCRP DT I+FN KLGNS DQVSVDKE YQ LVGKL+YLSHTRPDISFVVS VSQFMQ P EEHM+AV  ILRYLK+TPGKGLMFRK
Subjt:  MLGCRPTDTSIDFNRKLGNSYDQVSVDKESYQCLVGKLIYLSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMFRK

A0A5A7TY87 Reverse transcriptase1.70e-4282.02Show/hide
Query:  MLGCRPTDTSIDFNRKLGNSYDQVSVDKESYQCLVGKLIYLSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMFRK
        MLGCRP DT I+FN KLGNS DQV VDKE YQ LVGKLIYLS TRPDISFVVSVVSQFMQ P E+HM+AVN+ILRYLK+TPG GLMFRK
Subjt:  MLGCRPTDTSIDFNRKLGNSYDQVSVDKESYQCLVGKLIYLSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMFRK

A0A5D3C1Q3 Putative mitochondrial protein1.54e-4283.15Show/hide
Query:  MLGCRPTDTSIDFNRKLGNSYDQVSVDKESYQCLVGKLIYLSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMFRK
        MLGCRP DT I+FN KLGNS DQV VDKE YQ LVGKLIYLSHTRPDISF VSVVSQFMQ P E+HM+AVN+ILRYLK+TPGKGLMFRK
Subjt:  MLGCRPTDTSIDFNRKLGNSYDQVSVDKESYQCLVGKLIYLSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMFRK

A0A5D3D648 Putative mitochondrial protein1.40e-4282.02Show/hide
Query:  MLGCRPTDTSIDFNRKLGNSYDQVSVDKESYQCLVGKLIYLSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMFRK
        MLGC P DTSI+FN KLGNS DQV VDKE YQCLVGKLIYLSHTR DISF VSVV+QFMQ P+E+HM+AVN+ILRYLK+TPGKGLMFRK
Subjt:  MLGCRPTDTSIDFNRKLGNSYDQVSVDKESYQCLVGKLIYLSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMFRK

A0A5D3D7S1 Cysteine-rich RLK (Receptor-like protein kinase) 87.18e-4283.15Show/hide
Query:  MLGCRPTDTSIDFNRKLGNSYDQVSVDKESYQCLVGKLIYLSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMFRK
        MLGCRP DT I+FN KLGNS DQV VDKE YQ LVGKLIYLSHTRPDISF VSVVSQFMQ P E+HM+AVN+ILRYLK+TPGKGLMFRK
Subjt:  MLGCRPTDTSIDFNRKLGNSYDQVSVDKESYQCLVGKLIYLSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMFRK

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-943.6e-0838.3Show/hide
Query:  MLGCRPTDTSIDFNRKLGNSYDQVSVD------KESYQCLVGKLIY-LSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMF
        M   +P  T +  + KL       +V+      K  Y   VG L+Y +  TRPDI+  V VVS+F++ P +EH +AV  ILRYL+ T G  L F
Subjt:  MLGCRPTDTSIDFNRKLGNSYDQVSVD------KESYQCLVGKLIY-LSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMF

P25600 Putative transposon Ty5-1 protein YCL074W3.4e-0639.68Show/hide
Query:  DKESYQCLVGKLIYLSHT-RPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMFR
        D   YQ +VG+L++ ++T RPDIS+ VS++S+F++ P   H+++  ++LRYL +T    L +R
Subjt:  DKESYQCLVGKLIYLSHT-RPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMFR

P92519 Uncharacterized mitochondrial protein AtMg008101.8e-0736.67Show/hide
Query:  MLGCRPTDTSIDFNRKLGNSYDQVSV-DKESYQCLVGKLIYLSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMFRK
        ML C+P  T +    KL +S       D   ++ +VG L YL+ TRPDIS+ V++V Q M  P       + ++LRY+K T   GL   K
Subjt:  MLGCRPTDTSIDFNRKLGNSYDQVSV-DKESYQCLVGKLIYLSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMFRK

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.4e-1241.57Show/hide
Query:  MLGCRPTDTSIDFNRKLGNSYDQVSVDKESYQCLVGKLIYLSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMFRK
        M+  +P  T +  + KL         D   Y+ +VG L YL+ TRPDIS+ V+ +SQFM  P EEH++A+ +ILRYL  TP  G+  +K
Subjt:  MLGCRPTDTSIDFNRKLGNSYDQVSVDKESYQCLVGKLIYLSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMFRK

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.3e-1037.08Show/hide
Query:  MLGCRPTDTSIDFNRKLGNSYDQVSVDKESYQCLVGKLIYLSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMFRK
        ML  +P  T +  + KL         D   Y+ +VG L YL+ TRPD+S+ V+ +SQ+M  P ++H  A+ ++LRYL  TP  G+  +K
Subjt:  MLGCRPTDTSIDFNRKLGNSYDQVSVDKESYQCLVGKLIYLSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMFRK

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 83.5e-1442.86Show/hide
Query:  MLGCRPT----DTSIDFNRKLGNSYDQVSVDKESYQCLVGKLIYLSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMF
        +LGC+P+    D S+ F+   G  +    VD ++Y+ L+G+L+YL  TR DISF V+ +SQF + P   H +AV KIL Y+K T G+GL +
Subjt:  MLGCRPT----DTSIDFNRKLGNSYDQVSVDKESYQCLVGKLIYLSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMF

ATMG00240.1 Gag-Pol-related retrotransposon family protein4.6e-0644.9Show/hide
Query:  IYLSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMF
        +YL+ TRPD++F V+ +SQF        M+AV K+L Y+K T G+GL +
Subjt:  IYLSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMF

ATMG00810.1 DNA/RNA polymerases superfamily protein1.3e-0836.67Show/hide
Query:  MLGCRPTDTSIDFNRKLGNSYDQVSV-DKESYQCLVGKLIYLSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMFRK
        ML C+P  T +    KL +S       D   ++ +VG L YL+ TRPDIS+ V++V Q M  P       + ++LRY+K T   GL   K
Subjt:  MLGCRPTDTSIDFNRKLGNSYDQVSV-DKESYQCLVGKLIYLSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMFRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGGGTGTCGTCCCACTGACACTTCTATTGATTTCAACCGTAAACTAGGAAACTCCTATGATCAAGTTTCAGTTGATAAAGAATCGTATCAGTGCCTCGTGGGTAA
ATTAATTTACTTATCTCATACCCGTCCTGATATTTCCTTTGTTGTGAGTGTTGTCAGCCAGTTTATGCAGACCCCTAATGAGGAACACATGAAAGCTGTCAACAAAATTT
TGAGATACTTAAAATCAACACCTGGTAAAGGGCTGATGTTTAGAAAAAAAAAACATACAAAAAGACCATTGAGGCATATACTGACTCGGATTGGACAGGATCTGTTGTTG
ACAGAAAGTCTACCTCTGCTTATTGTACCTTTGTTTGGGGTAATCTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTAGGGTGTCGTCCCACTGACACTTCTATTGATTTCAACCGTAAACTAGGAAACTCCTATGATCAAGTTTCAGTTGATAAAGAATCGTATCAGTGCCTCGTGGGTAA
ATTAATTTACTTATCTCATACCCGTCCTGATATTTCCTTTGTTGTGAGTGTTGTCAGCCAGTTTATGCAGACCCCTAATGAGGAACACATGAAAGCTGTCAACAAAATTT
TGAGATACTTAAAATCAACACCTGGTAAAGGGCTGATGTTTAGAAAAAAAAAACATACAAAAAGACCATTGAGGCATATACTGACTCGGATTGGACAGGATCTGTTGTTG
ACAGAAAGTCTACCTCTGCTTATTGTACCTTTGTTTGGGGTAATCTTGTAA
Protein sequenceShow/hide protein sequence
MLGCRPTDTSIDFNRKLGNSYDQVSVDKESYQCLVGKLIYLSHTRPDISFVVSVVSQFMQTPNEEHMKAVNKILRYLKSTPGKGLMFRKKKHTKRPLRHILTRIGQDLLL
TESLPLLIVPLFGVIL