; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy5G020773 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G020773
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionTranscription termination factor MTERF5
Genome locationGy14Chr5:26680007..26680672
RNA-Seq ExpressionCsGy5G020773
SyntenyCsGy5G020773
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domainsIPR003690 - Transcription termination factor, mitochondrial/chloroplastic
IPR038538 - MTERF superfamily, mitochondrial/chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034116.1 transcription termination factor MTERF2 [Cucumis melo var. makuwa]1.95e-8264.29Show/hide
Query:  MKEILESDEQVTAAICRSPRLLICDLKGNFKSSADVLASEGVPSRNITKMITLNPRTFMQKADRVIGAVKTVKELGIEPKARMFIYALF-----------
        +KEILESDEQVT AI R P LLICDLKG+ K   DVL SEGVPSRNI++MI+L PR  MQK DR+I AVKTVKELGIEPKAR F+YA+            
Subjt:  MKEILESDEQVTAAICRSPRLLICDLKGNFKSSADVLASEGVPSRNITKMITLNPRTFMQKADRVIGAVKTVKELGIEPKARMFIYALF-----------

Query:  -------------------------------EKLRDVADFCSNTAKLDPGTLISYPVLFKYSVDKRLQPRYKVLEVLKVKDLLKIKKIASVFVKGERIFV
                                       EK+RDVADFC NTAKLDPGTLISYP LFK S DKRL+PRYKVLEVLKVK+LLK KKIASV V+GER FV
Subjt:  -------------------------------EKLRDVADFCSNTAKLDPGTLISYPVLFKYSVDKRLQPRYKVLEVLKVKDLLKIKKIASVFVKGERIFV

Query:  EKYVVKHLDEIPNLMDIYRGNVAS
        EKYVVKHLDEIPNLMDIY GNV +
Subjt:  EKYVVKHLDEIPNLMDIYRGNVAS

KAE8648668.1 hypothetical protein Csa_008761 [Cucumis sativus]4.77e-123100Show/hide
Query:  MKEILESDEQVTAAICRSPRLLICDLKGNFKSSADVLASEGVPSRNITKMITLNPRTFMQKADRVIGAVKTVKELGIEPKARMFIYALFEKLRDVADFCS
        MKEILESDEQVTAAICRSPRLLICDLKGNFKSSADVLASEGVPSRNITKMITLNPRTFMQKADRVIGAVKTVKELGIEPKARMFIYALFEKLRDVADFCS
Subjt:  MKEILESDEQVTAAICRSPRLLICDLKGNFKSSADVLASEGVPSRNITKMITLNPRTFMQKADRVIGAVKTVKELGIEPKARMFIYALFEKLRDVADFCS

Query:  NTAKLDPGTLISYPVLFKYSVDKRLQPRYKVLEVLKVKDLLKIKKIASVFVKGERIFVEKYVVKHLDEIPNLMDIYRGNVAS
        NTAKLDPGTLISYPVLFKYSVDKRLQPRYKVLEVLKVKDLLKIKKIASVFVKGERIFVEKYVVKHLDEIPNLMDIYRGNVAS
Subjt:  NTAKLDPGTLISYPVLFKYSVDKRLQPRYKVLEVLKVKDLLKIKKIASVFVKGERIFVEKYVVKHLDEIPNLMDIYRGNVAS

XP_008445929.1 PREDICTED: transcription termination factor MTERF8, chloroplastic-like [Cucumis melo]9.74e-8362.95Show/hide
Query:  MKEILESDEQVTAAICRSPRLLICDLKGNFKSSADVLASEGVPSRNITKMITLNPRTFMQKADRVIGAVKTVKELGIEPKARMFIYALF-----------
        +KEILESDEQVTAAICR P LLICDLK N K   DVLASEGVPSRNI KMI +NPR+ MQK DR+  AVKTVKELGIEPKARMF+YA+            
Subjt:  MKEILESDEQVTAAICRSPRLLICDLKGNFKSSADVLASEGVPSRNITKMITLNPRTFMQKADRVIGAVKTVKELGIEPKARMFIYALF-----------

Query:  -------------------------------EKLRDVADFCSNTAKLDPGTLISYPVLFKYSVDKRLQPRYKVLEVLKVKDLLKIKKIASVFVKGERIFV
                                       +K+RDVADFC NTAKLDPGTL+SYP LF+ S++KRL  RYKVLEVLKVK+LLK KKIA +F++GE+ FV
Subjt:  -------------------------------EKLRDVADFCSNTAKLDPGTLISYPVLFKYSVDKRLQPRYKVLEVLKVKDLLKIKKIASVFVKGERIFV

Query:  EKYVVKHLDEIPNLMDIYRGNVAS
        EKYVVKHLDEIPNLMDIYRGNV +
Subjt:  EKYVVKHLDEIPNLMDIYRGNVAS

XP_011655534.2 transcription termination factor MTEF1, chloroplastic-like [Cucumis sativus]5.85e-8767.11Show/hide
Query:  MKEILESDEQVTAAIC-RSPRLLICDLKGNFKSSADVLASEGVPSRNITKMITLNPRTFMQKADRVIGAVKTVKELGIEPKARMFIYALF----------
        +KEILESDEQVTAA+  R P LLI D +GNFKSS+D+LASEGVPSRNI KMI LNPRTFMQKADR+I AVKTVKELGIEPKARMFIYALF          
Subjt:  MKEILESDEQVTAAIC-RSPRLLICDLKGNFKSSADVLASEGVPSRNITKMITLNPRTFMQKADRVIGAVKTVKELGIEPKARMFIYALF----------

Query:  --------------------------------EKLRDVADFCSNTAKLDPGTLISYPVLFKYSVDKRLQPRYKVLEVLKVKDLLKIKKIASVFVKGERIF
                                        EKLRDVADFC N AKLDP TLI+YP  FK S++KRLQPRYKVLEVLKVK+LLKIKKI  V ++GER F
Subjt:  --------------------------------EKLRDVADFCSNTAKLDPGTLISYPVLFKYSVDKRLQPRYKVLEVLKVKDLLKIKKIASVFVKGERIF

Query:  VEKYVVKHLDEIPNLMDIYRGNVAS
        VEKYVVKHLDEIPNLMDIYRGNVA+
Subjt:  VEKYVVKHLDEIPNLMDIYRGNVAS

XP_031741755.1 transcription termination factor MTERF6, chloroplastic/mitochondrial-like [Cucumis sativus]4.65e-8463.84Show/hide
Query:  MKEILESDEQVTAAICRSPRLLICDLKGNFKSSADVLASEGVPSRNITKMITLNPRTFMQKADRVIGAVKTVKELGIEPKARMFIYALF-----------
        +KEILE DEQVTAA+ R P LLICDLKGNFKS+ DVLASEGVPSRNI K I LNPR  M   DR+I AVK VKELG+EPKAR F++A+            
Subjt:  MKEILESDEQVTAAICRSPRLLICDLKGNFKSSADVLASEGVPSRNITKMITLNPRTFMQKADRVIGAVKTVKELGIEPKARMFIYALF-----------

Query:  -------------------------------EKLRDVADFCSNTAKLDPGTLISYPVLFKYSVDKRLQPRYKVLEVLKVKDLLKIKKIASVFVKGERIFV
                                       EKLRDVADFCSNTAKLDP +LISYPVLFKYSV KRLQPR KV+EVLK+K+LLKIK+IASVFVKGE+ FV
Subjt:  -------------------------------EKLRDVADFCSNTAKLDPGTLISYPVLFKYSVDKRLQPRYKVLEVLKVKDLLKIKKIASVFVKGERIFV

Query:  EKYVVKHLDEIPNLMDIYRGNVAS
        EKY+VKHLDEIPNLMDIY+GNV +
Subjt:  EKYVVKHLDEIPNLMDIYRGNVAS

TrEMBL top hitse value%identityAlignment
A0A1S3BDE1 transcription termination factor MTERF2, chloroplastic-like9.46e-8364.29Show/hide
Query:  MKEILESDEQVTAAICRSPRLLICDLKGNFKSSADVLASEGVPSRNITKMITLNPRTFMQKADRVIGAVKTVKELGIEPKARMFIYALF-----------
        +KEILESDEQVT AI R P LLICDLKG+ K   DVL SEGVPSRNI++MI+L PR  MQK DR+I AVKTVKELGIEPKAR F+YA+            
Subjt:  MKEILESDEQVTAAICRSPRLLICDLKGNFKSSADVLASEGVPSRNITKMITLNPRTFMQKADRVIGAVKTVKELGIEPKARMFIYALF-----------

Query:  -------------------------------EKLRDVADFCSNTAKLDPGTLISYPVLFKYSVDKRLQPRYKVLEVLKVKDLLKIKKIASVFVKGERIFV
                                       EK+RDVADFC NTAKLDPGTLISYP LFK S DKRL+PRYKVLEVLKVK+LLK KKIASV V+GER FV
Subjt:  -------------------------------EKLRDVADFCSNTAKLDPGTLISYPVLFKYSVDKRLQPRYKVLEVLKVKDLLKIKKIASVFVKGERIFV

Query:  EKYVVKHLDEIPNLMDIYRGNVAS
        EKYVVKHLDEIPNLMDIY GNV +
Subjt:  EKYVVKHLDEIPNLMDIYRGNVAS

A0A1S3BDU9 transcription termination factor MTERF8, chloroplastic-like4.72e-8362.95Show/hide
Query:  MKEILESDEQVTAAICRSPRLLICDLKGNFKSSADVLASEGVPSRNITKMITLNPRTFMQKADRVIGAVKTVKELGIEPKARMFIYALF-----------
        +KEILESDEQVTAAICR P LLICDLK N K   DVLASEGVPSRNI KMI +NPR+ MQK DR+  AVKTVKELGIEPKARMF+YA+            
Subjt:  MKEILESDEQVTAAICRSPRLLICDLKGNFKSSADVLASEGVPSRNITKMITLNPRTFMQKADRVIGAVKTVKELGIEPKARMFIYALF-----------

Query:  -------------------------------EKLRDVADFCSNTAKLDPGTLISYPVLFKYSVDKRLQPRYKVLEVLKVKDLLKIKKIASVFVKGERIFV
                                       +K+RDVADFC NTAKLDPGTL+SYP LF+ S++KRL  RYKVLEVLKVK+LLK KKIA +F++GE+ FV
Subjt:  -------------------------------EKLRDVADFCSNTAKLDPGTLISYPVLFKYSVDKRLQPRYKVLEVLKVKDLLKIKKIASVFVKGERIFV

Query:  EKYVVKHLDEIPNLMDIYRGNVAS
        EKYVVKHLDEIPNLMDIYRGNV +
Subjt:  EKYVVKHLDEIPNLMDIYRGNVAS

A0A5A7SW09 Transcription termination factor MTERF29.46e-8364.29Show/hide
Query:  MKEILESDEQVTAAICRSPRLLICDLKGNFKSSADVLASEGVPSRNITKMITLNPRTFMQKADRVIGAVKTVKELGIEPKARMFIYALF-----------
        +KEILESDEQVT AI R P LLICDLKG+ K   DVL SEGVPSRNI++MI+L PR  MQK DR+I AVKTVKELGIEPKAR F+YA+            
Subjt:  MKEILESDEQVTAAICRSPRLLICDLKGNFKSSADVLASEGVPSRNITKMITLNPRTFMQKADRVIGAVKTVKELGIEPKARMFIYALF-----------

Query:  -------------------------------EKLRDVADFCSNTAKLDPGTLISYPVLFKYSVDKRLQPRYKVLEVLKVKDLLKIKKIASVFVKGERIFV
                                       EK+RDVADFC NTAKLDPGTLISYP LFK S DKRL+PRYKVLEVLKVK+LLK KKIASV V+GER FV
Subjt:  -------------------------------EKLRDVADFCSNTAKLDPGTLISYPVLFKYSVDKRLQPRYKVLEVLKVKDLLKIKKIASVFVKGERIFV

Query:  EKYVVKHLDEIPNLMDIYRGNVAS
        EKYVVKHLDEIPNLMDIY GNV +
Subjt:  EKYVVKHLDEIPNLMDIYRGNVAS

A0A5D3CV65 Transcription termination factor MTERF84.72e-8362.95Show/hide
Query:  MKEILESDEQVTAAICRSPRLLICDLKGNFKSSADVLASEGVPSRNITKMITLNPRTFMQKADRVIGAVKTVKELGIEPKARMFIYALF-----------
        +KEILESDEQVTAAICR P LLICDLK N K   DVLASEGVPSRNI KMI +NPR+ MQK DR+  AVKTVKELGIEPKARMF+YA+            
Subjt:  MKEILESDEQVTAAICRSPRLLICDLKGNFKSSADVLASEGVPSRNITKMITLNPRTFMQKADRVIGAVKTVKELGIEPKARMFIYALF-----------

Query:  -------------------------------EKLRDVADFCSNTAKLDPGTLISYPVLFKYSVDKRLQPRYKVLEVLKVKDLLKIKKIASVFVKGERIFV
                                       +K+RDVADFC NTAKLDPGTL+SYP LF+ S++KRL  RYKVLEVLKVK+LLK KKIA +F++GE+ FV
Subjt:  -------------------------------EKLRDVADFCSNTAKLDPGTLISYPVLFKYSVDKRLQPRYKVLEVLKVKDLLKIKKIASVFVKGERIFV

Query:  EKYVVKHLDEIPNLMDIYRGNVAS
        EKYVVKHLDEIPNLMDIYRGNV +
Subjt:  EKYVVKHLDEIPNLMDIYRGNVAS

A0A5D3CXX8 Transcription termination factor MTERF29.46e-8364.29Show/hide
Query:  MKEILESDEQVTAAICRSPRLLICDLKGNFKSSADVLASEGVPSRNITKMITLNPRTFMQKADRVIGAVKTVKELGIEPKARMFIYALF-----------
        +KEILESDEQVT AI R P LLICDLKG+ K   DVL SEGVPSRNI++MI+L PR  MQK DR+I AVKTVKELGIEPKAR F+YA+            
Subjt:  MKEILESDEQVTAAICRSPRLLICDLKGNFKSSADVLASEGVPSRNITKMITLNPRTFMQKADRVIGAVKTVKELGIEPKARMFIYALF-----------

Query:  -------------------------------EKLRDVADFCSNTAKLDPGTLISYPVLFKYSVDKRLQPRYKVLEVLKVKDLLKIKKIASVFVKGERIFV
                                       EK+RDVADFC NTAKLDPGTLISYP LFK S DKRL+PRYKVLEVLKVK+LLK KKIASV V+GER FV
Subjt:  -------------------------------EKLRDVADFCSNTAKLDPGTLISYPVLFKYSVDKRLQPRYKVLEVLKVKDLLKIKKIASVFVKGERIFV

Query:  EKYVVKHLDEIPNLMDIYRGNVAS
        EKYVVKHLDEIPNLMDIY GNV +
Subjt:  EKYVVKHLDEIPNLMDIYRGNVAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G21150.1 Mitochondrial transcription termination factor family protein2.2e-0921.08Show/hide
Query:  MKEILESDEQVTAAICRSPRLLICDLKGNFKSSADVLASEGVPSRNITKMITLNPRTFMQKADRVIGAVKTVKELGIEPKARMFIYALF-----------
        +K IL  +E V   + R  R     +         +    GVP ++I  ++  +P TF  +  R    +  V   G +PK   F++A+            
Subjt:  MKEILESDEQVTAAICRSPRLLICDLKGNFKSSADVLASEGVPSRNITKMITLNPRTFMQKADRVIGAVKTVKELGIEPKARMFIYALF-----------

Query:  -------------------------------EKLRDVADFCSNTAKLDPGTLISYPVLFKYSVDKRLQPRYKVLEVLKVKDLLKIKKI--ASVFVKGERI
                                       EK+    ++  N   L    +++ PV+   S++KR++PR +V+ +L  K L+K + I   ++       
Subjt:  -------------------------------EKLRDVADFCSNTAKLDPGTLISYPVLFKYSVDKRLQPRYKVLEVLKVKDLLKIKKI--ASVFVKGERI

Query:  FVEKYVVKHLDEIPNLMDIYRGN
        F++K+V+K+ DE+P L+  +  N
Subjt:  FVEKYVVKHLDEIPNLMDIYRGN

AT1G61960.1 Mitochondrial transcription termination factor family protein2.0e-0723.08Show/hide
Query:  DVLASEGVPSRNITKMITLNPRTFMQKADRVIGAVKTVKELGIEPKARMFIYALF--------EKLRDVADFCSNTAKLDPGTLISYPVLFKYSVDKRLQ
        + L S G+    +  ++  +P+       +++ +++T   LG        +   +        E ++   +F           L+S P +F YS++KR  
Subjt:  DVLASEGVPSRNITKMITLNPRTFMQKADRVIGAVKTVKELGIEPKARMFIYALF--------EKLRDVADFCSNTAKLDPGTLISYPVLFKYSVDKRLQ

Query:  PRYKVLEVLKVKDLLK----IKKIASVFVKGERIFVEKYVVKHLDEIPNLMDIYRG
        PR  V++ L  K L+K       ++SV    ++ F+ +YV+KH    P LM I+ G
Subjt:  PRYKVLEVLKVKDLLK----IKKIASVFVKGERIFVEKYVVKHLDEIPNLMDIYRG

AT1G61990.1 Mitochondrial transcription termination factor family protein5.4e-0822.05Show/hide
Query:  MKEILESD-EQVTAAICRSPRLLICDLKGNFKSSADVLASEGVPSRNITKMITLNPRTFMQKADRVIGAVKTVKELGIEPKARMFIYALF--------EK
        +K+++E   +  T     + R+L    +   +    V  S G    ++ ++    P        +++ + +T  +LG      + +   +        E 
Subjt:  MKEILESD-EQVTAAICRSPRLLICDLKGNFKSSADVLASEGVPSRNITKMITLNPRTFMQKADRVIGAVKTVKELGIEPKARMFIYALF--------EK

Query:  LRDVADFCSNTAKLDPGTLISYPVLFKYSVDKRLQPRYKVLEVLKVKDLLK----IKKIASVFVKGERIFVEKYVVKHLDEIPNLMDIY-RGNVA
        ++   +F     K     L+ +P +F YS++KR+ PR  +LE L  K LL+    +  ++SV    +  F+++YV+KH + +P LM I+ +G+V+
Subjt:  LRDVADFCSNTAKLDPGTLISYPVLFKYSVDKRLQPRYKVLEVLKVKDLLK----IKKIASVFVKGERIFVEKYVVKHLDEIPNLMDIY-RGNVA

AT1G78930.1 Mitochondrial transcription termination factor family protein3.7e-0926.67Show/hide
Query:  EQVTAAICRSPRLLICDLKGNFKSSADVLASEGVPSRNITKMITLNPRTFMQKADR-VIGAVKTVKELGIEPKARMFI---------YALFEKLRDVADF
        E V   +CR P +  C ++   +     L   GV + +  ++I   P   +  AD+ V+  +K + E+GI  +   F+         Y++ + LR   +F
Subjt:  EQVTAAICRSPRLLICDLKGNFKSSADVLASEGVPSRNITKMITLNPRTFMQKADR-VIGAVKTVKELGIEPKARMFI---------YALFEKLRDVADF

Query:  CSNTAKLDPGTLISYPVLFKYSVDKRLQPRYKVLE
          N+ +     +I YP  F YS++KR++PR++VL+
Subjt:  CSNTAKLDPGTLISYPVLFKYSVDKRLQPRYKVLE

AT5G07900.1 Mitochondrial transcription termination factor family protein3.1e-1625.68Show/hide
Query:  MKEILESDEQVTAAICRSPRLLICDLKGNFKSSADVLASEGVPSRNITKMITLNPRTFMQKADRVIGAVKTVKELGIEPKARMFIYAL------------
        +K +L+SDE++ AA+ R+  + + D   N   + + +A  GVP + I  ++T  P   MQK        K  +E+G  P+   F+ A+            
Subjt:  MKEILESDEQVTAAICRSPRLLICDLKGNFKSSADVLASEGVPSRNITKMITLNPRTFMQKADRVIGAVKTVKELGIEPKARMFIYAL------------

Query:  ---FE----------------------------KLRDVADFCSNTAKLDPGTLISYPVLFKYSVDKRLQPRYKVLEVLKVKDLLKIK-KIASVFVKGERI
           FE                            K+    ++  N   + P ++   PV+  +S++KR+ PR  V +VL    L+K    + S+ V  E++
Subjt:  ---FE----------------------------KLRDVADFCSNTAKLDPGTLISYPVLFKYSVDKRLQPRYKVLEVLKVKDLLKIK-KIASVFVKGERI

Query:  FVEKYVVKHLDEIPNLMDIYRG
        F+EK V+K+ +E+P LM++Y G
Subjt:  FVEKYVVKHLDEIPNLMDIYRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGAAATTCTAGAATCGGATGAACAAGTAACTGCTGCTATTTGTCGTTCTCCAAGGCTTCTGATTTGTGATTTGAAGGGTAATTTTAAATCTAGCGCTGAT
GTTTTGGCCAGTGAAGGAGTACCTTCTAGGAATATAACGAAAATGATTACATTGAACCCTAGAACTTTTATGCAAAAGGCTGATAGAGTGATTGGTGCAGTGAAA
ACGGTTAAAGAATTAGGCATTGAACCAAAGGCTCGCATGTTTATTTATGCACTTTTTGAGAAATTGAGGGATGTTGCAGATTTCTGTTCCAACACTGCAAAGTTA
GATCCAGGAACTCTAATATCTTACCCTGTGTTATTCAAGTATTCAGTCGACAAGCGGCTCCAACCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTGAAAGATCTT
CTTAAAATCAAAAAGATTGCTTCGGTATTTGTGAAAGGGGAGAGAATTTTTGTGGAGAAATATGTAGTTAAGCATTTGGATGAAATCCCAAATCTGATGGACATA
TACCGGGGCAATGTTGCAAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGAAATTCTAGAATCGGATGAACAAGTAACTGCTGCTATTTGTCGTTCTCCAAGGCTTCTGATTTGTGATTTGAAGGGTAATTTTAAATCTAGCGCTGAT
GTTTTGGCCAGTGAAGGAGTACCTTCTAGGAATATAACGAAAATGATTACATTGAACCCTAGAACTTTTATGCAAAAGGCTGATAGAGTGATTGGTGCAGTGAAA
ACGGTTAAAGAATTAGGCATTGAACCAAAGGCTCGCATGTTTATTTATGCACTTTTTGAGAAATTGAGGGATGTTGCAGATTTCTGTTCCAACACTGCAAAGTTA
GATCCAGGAACTCTAATATCTTACCCTGTGTTATTCAAGTATTCAGTCGACAAGCGGCTCCAACCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTGAAAGATCTT
CTTAAAATCAAAAAGATTGCTTCGGTATTTGTGAAAGGGGAGAGAATTTTTGTGGAGAAATATGTAGTTAAGCATTTGGATGAAATCCCAAATCTGATGGACATA
TACCGGGGCAATGTTGCAAGTTAA
Protein sequenceShow/hide protein sequence
MKEILESDEQVTAAICRSPRLLICDLKGNFKSSADVLASEGVPSRNITKMITLNPRTFMQKADRVIGAVKTVKELGIEPKARMFIYALFEKLRDVADFCSNTAKL
DPGTLISYPVLFKYSVDKRLQPRYKVLEVLKVKDLLKIKKIASVFVKGERIFVEKYVVKHLDEIPNLMDIYRGNVAS