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CsGy5G021310 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G021310
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionPHD finger protein ALFIN-LIKE 1-like
Genome locationGy14Chr5:27072858..27073778
RNA-Seq ExpressionCsGy5G021310
SyntenyCsGy5G021310
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0042393 - histone binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR021998 - Alfin, N-terminal
IPR045104 - Alfin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB88396.1 hypothetical protein L484_007679 [Morus notabilis]4.60e-2062.67Show/hide
Query:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRYNCSTFEFLLVGFKLGSVKCNS
        EVPPEL EPALGINFA DGM RK W  LVAVH DS LLSVAFYFGARL+R++RY               S++CNS
Subjt:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRYNCSTFEFLLVGFKLGSVKCNS

KAE8651982.1 hypothetical protein Csa_016936 [Cucumis sativus]2.82e-3583.78Show/hide
Query:  PPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRYNCSTFEFLLVGFKLGSVKCNSF
        P E  E  L +    DGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRYNCSTFEFLLV FKLGSVKCNSF
Subjt:  PPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRYNCSTFEFLLVGFKLGSVKCNSF

KAF7133473.1 hypothetical protein RHSIM_Rhsim09G0177500 [Rhododendron simsii]3.90e-2078.57Show/hide
Query:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRYNC
        EVPPEL EPALGINFA DGM R+ W  LVAVH DS LLSVAFYFGARL+R++RYNC
Subjt:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRYNC

MBA0598408.1 hypothetical protein [Gossypium raimondii]4.10e-2077.78Show/hide
Query:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRY
        EVPPEL EPALGINFA DGM+RK W  LVAVH D  LLSVAFYFGARL+R++RY
Subjt:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRY

XP_020081407.1 PHD finger protein ALFIN-LIKE 2-like [Ananas comosus]3.22e-2079.63Show/hide
Query:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRY
        EVPPEL EPALGINFA DGM+RK W  LVAVH DS LLSVAFYFGARL+R++RY
Subjt:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRY

TrEMBL top hitse value%identityAlignment
A0A0A0KPZ8 Uncharacterized protein1.36e-3583.78Show/hide
Query:  PPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRYNCSTFEFLLVGFKLGSVKCNSF
        P E  E  L +    DGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRYNCSTFEFLLV FKLGSVKCNSF
Subjt:  PPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRYNCSTFEFLLVGFKLGSVKCNSF

A0A6P5EDS8 PHD finger protein ALFIN-LIKE 2-like1.56e-2079.63Show/hide
Query:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRY
        EVPPEL EPALGINFA DGM+RK W  LVAVH DS LLSVAFYFGARL+R++RY
Subjt:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRY

A0A7J8QAD2 Uncharacterized protein1.98e-2077.78Show/hide
Query:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRY
        EVPPEL EPALGINFA DGM+RK W  LVAVH D  LLSVAFYFGARL+R++RY
Subjt:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRY

A0A7J8Y5G1 Uncharacterized protein1.98e-2077.78Show/hide
Query:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRY
        EVPPEL EPALGINFA DGM+RK W  LVAVH D  LLSVAFYFGARL+R++RY
Subjt:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRY

W9RFJ8 Uncharacterized protein2.23e-2062.67Show/hide
Query:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRYNCSTFEFLLVGFKLGSVKCNS
        EVPPEL EPALGINFA DGM RK W  LVAVH DS LLSVAFYFGARL+R++RY               S++CNS
Subjt:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRYNCSTFEFLLVGFKLGSVKCNS

SwissProt top hitse value%identityAlignment
B8B8I3 PHD finger protein ALFIN-LIKE 22.8e-1573.58Show/hide
Query:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKR
        EVPPEL EPALGINFA DGM R+ W  LVAVH DS LLSVAF+FGARL+ ++R
Subjt:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKR

Q8H383 PHD finger protein ALFIN-LIKE 22.8e-1573.58Show/hide
Query:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKR
        EVPPEL EPALGINFA DGM R+ W  LVAVH DS LLSVAF+FGARL+ ++R
Subjt:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKR

Q8S8M9 PHD finger protein ALFIN-LIKE 68.2e-1564.52Show/hide
Query:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRYNCSTFEFL
        EVPPEL EPALGINFA DGM  K W  LVAVH DS LLSVAFYFGAR    K      F+ +
Subjt:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRYNCSTFEFL

Q9FFF5 PHD finger protein ALFIN-LIKE 13.7e-1573.58Show/hide
Query:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKR
        EVPPEL EPALGINFA DGM RK W  LVAVH D  LLSV+ YFGARL+R++R
Subjt:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKR

Q9SRM4 PHD finger protein ALFIN-LIKE 24.3e-1675.47Show/hide
Query:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKR
        EVPPEL EPALGINFA DGM RK W  LVAVH D  LLSV+FYFGARL+R++R
Subjt:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKR

Arabidopsis top hitse value%identityAlignment
AT2G02470.1 alfin-like 65.8e-1664.52Show/hide
Query:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRYNCSTFEFL
        EVPPEL EPALGINFA DGM  K W  LVAVH DS LLSVAFYFGAR    K      F+ +
Subjt:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRYNCSTFEFL

AT3G11200.1 alfin-like 23.1e-1775.47Show/hide
Query:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKR
        EVPPEL EPALGINFA DGM RK W  LVAVH D  LLSV+FYFGARL+R++R
Subjt:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKR

AT3G11200.2 alfin-like 23.1e-1775.47Show/hide
Query:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKR
        EVPPEL EPALGINFA DGM RK W  LVAVH D  LLSV+FYFGARL+R++R
Subjt:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKR

AT5G05610.1 alfin-like 12.6e-1673.58Show/hide
Query:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKR
        EVPPEL EPALGINFA DGM RK W  LVAVH D  LLSV+ YFGARL+R++R
Subjt:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKR

AT5G05610.2 alfin-like 12.6e-1673.58Show/hide
Query:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKR
        EVPPEL EPALGINFA DGM RK W  LVAVH D  LLSV+ YFGARL+R++R
Subjt:  EVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGTGAATTCTACGGCCTTTGTGATTCAGGCAGAGGTTCCACCGGAGCTTCTAGAGCCTGCACTTGGAATTAATTTTGCAACAGATGGCATGGACAGAAAATATTG
GCGACCTCTTGTTGCTGTACATGGTGATTCCTGTTTGCTCTCTGTGGCTTTCTATTTTGGAGCAAGACTTGACCGAAGCAAAAGGTACAACTGTTCCACTTTTGAATTTT
TGCTTGTGGGCTTTAAGTTAGGTTCTGTTAAATGCAATTCTTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGTGAATTCTACGGCCTTTGTGATTCAGGCAGAGGTTCCACCGGAGCTTCTAGAGCCTGCACTTGGAATTAATTTTGCAACAGATGGCATGGACAGAAAATATTG
GCGACCTCTTGTTGCTGTACATGGTGATTCCTGTTTGCTCTCTGTGGCTTTCTATTTTGGAGCAAGACTTGACCGAAGCAAAAGGTACAACTGTTCCACTTTTGAATTTT
TGCTTGTGGGCTTTAAGTTAGGTTCTGTTAAATGCAATTCTTTTTAA
Protein sequenceShow/hide protein sequence
MFVNSTAFVIQAEVPPELLEPALGINFATDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRYNCSTFEFLLVGFKLGSVKCNSF