; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy5G021660 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G021660
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionRING-type domain-containing protein
Genome locationGy14Chr5:27303853..27304631
RNA-Seq ExpressionCsGy5G021660
SyntenyCsGy5G021660
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR044249 - Probable E3 ubiquitin-protein ligase XERICO-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034267.1 putative E3 ubiquitin-protein ligase XERICO [Cucumis melo var. makuwa]1.08e-6896.49Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRRERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRF
        MGLSNFPPSAEGVLLLPVLVM+TVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWEN RERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRF
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRRERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRF

Query:  EADEEVSELSYKSF
        EADEEVSELS K F
Subjt:  EADEEVSELSYKSF

KAG6601543.1 putative E3 ubiquitin-protein ligase XERICO, partial [Cucurbita argyrosperma subsp. sororia]1.81e-5887.83Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRRERRISITQFKTLGQSFN-GETEEEFVSRCVMAECCVCLCR
        MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKN VRSVIQMMSASGN SSSEEE DWEN RERRISITQFK+LGQSFN G TE+   SRCVMAECCVCLC 
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRRERRISITQFKTLGQSFN-GETEEEFVSRCVMAECCVCLCR

Query:  FEADEEVSELSYKSF
        FEADEEVSELS K F
Subjt:  FEADEEVSELSYKSF

XP_011655602.1 probable E3 ubiquitin-protein ligase XERICO [Cucumis sativus]1.60e-7098.25Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRRERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRF
        MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRRERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRF
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRRERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRF

Query:  EADEEVSELSYKSF
        EADEEVSELS K F
Subjt:  EADEEVSELSYKSF

XP_023523084.1 probable E3 ubiquitin-protein ligase XERICO [Cucurbita pepo subsp. pepo]1.81e-5886.96Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRRERRISITQFKTLGQSFN-GETEEEFVSRCVMAECCVCLCR
        MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKN VRSVIQMMSASGN SSSEEE+DWEN RERRISITQFK+LGQSFN G TE+   SRC MAECCVCLC 
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRRERRISITQFKTLGQSFN-GETEEEFVSRCVMAECCVCLCR

Query:  FEADEEVSELSYKSF
        FEADEEVSELS K F
Subjt:  FEADEEVSELSYKSF

XP_038892017.1 probable E3 ubiquitin-protein ligase XERICO [Benincasa hispida]6.70e-6391.23Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRRERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRF
        MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGN+SSSEEEYDWEN RERRISITQFK+LGQSFNGETE+  VSRCVMAECCVCLC F
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRRERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRF

Query:  EADEEVSELSYKSF
        EADEEVSELS K +
Subjt:  EADEEVSELSYKSF

TrEMBL top hitse value%identityAlignment
A0A0A0KTI8 RING-type domain-containing protein7.76e-7198.25Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRRERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRF
        MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRRERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRF
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRRERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRF

Query:  EADEEVSELSYKSF
        EADEEVSELS K F
Subjt:  EADEEVSELSYKSF

A0A5A7SYA9 Putative E3 ubiquitin-protein ligase XERICO5.24e-6996.49Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRRERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRF
        MGLSNFPPSAEGVLLLPVLVM+TVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWEN RERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRF
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRRERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRF

Query:  EADEEVSELSYKSF
        EADEEVSELS K F
Subjt:  EADEEVSELSYKSF

A0A6J1DFU2 probable E3 ubiquitin-protein ligase XERICO2.76e-5381.03Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSS--SSEEEYDWENRRERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLC
        MGLSNFPP AEGVLLLPVL+MNTVMSMAFLK+ VRSVIQMMSASG++S  SSEEEYD EN RERRISITQFK+L QSFNG TE+   SRC+ AECCVCLC
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSS--SSEEEYDWENRRERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLC

Query:  RFEADEEVSELSYKSF
         FEADEEVSELS K F
Subjt:  RFEADEEVSELSYKSF

A0A6J1GZI7 probable E3 ubiquitin-protein ligase XERICO9.24e-5887.83Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRRERRISITQFKTLGQSFN-GETEEEFVSRCVMAECCVCLCR
        MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKN VRSVIQMMSASGN SSSEEE DWEN RERRISITQFK+LGQSFN G TE+   SRCVMAECCVCLC 
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRRERRISITQFKTLGQSFN-GETEEEFVSRCVMAECCVCLCR

Query:  FEADEEVSELSYKSF
        FEADEEVSELS K F
Subjt:  FEADEEVSELSYKSF

A0A6J1J1V9 probable E3 ubiquitin-protein ligase XERICO1.18e-5886.96Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRRERRISITQFKTLGQSFN-GETEEEFVSRCVMAECCVCLCR
        MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKN VRSVIQMMSASGN SSSEEE+DWEN RERRISITQFK+LGQSFN G TE+   SRC+MAECCVCLC 
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRRERRISITQFKTLGQSFN-GETEEEFVSRCVMAECCVCLCR

Query:  FEADEEVSELSYKSF
        FEADEEVSELS K F
Subjt:  FEADEEVSELSYKSF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24580.1 RING/U-box superfamily protein9.6e-1448.31Show/hide
Query:  MNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRRERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSEL
        MNTV+S+  LKN VRSV Q++++   SS   ++   ++   RRISITQFK+L ++   E EE+ V      ECCVCLC F+ +EEVSEL
Subjt:  MNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRRERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSEL

AT1G67856.1 RING/U-box superfamily protein1.7e-1845.95Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSS-SSEEEYDWE-NRRERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLC
        MG+S++P ++EGV  +P+LVMNTV+S++ +KN VRSV+ M+S+  N + + E++ D E ++R RRISIT F++L ++     E E +      +CCVCLC
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSS-SSEEEYDWE-NRRERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLC

Query:  RFEADEEVSEL
         F+ +EEVSEL
Subjt:  RFEADEEVSEL

AT2G04240.1 RING/U-box superfamily protein1.1e-0430.58Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSAS---GNSSSSEEEYDWENRRERR---ISITQFKTLGQSFNGETEE---EFVSRCVMA
        MGLS+ P  +EG+L   V+++NT +S++ +K  VRS + ++  S    +SS S      EN          + Q ++  + F   T     E + RC   
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSAS---GNSSSSEEEYDWENRRERR---ISITQFKTLGQSFNGETEE---EFVSRCVMA

Query:  ---ECCVCLCRFEADEEVSEL
           EC VCL +F+ D E+++L
Subjt:  ---ECCVCLCRFEADEEVSEL

AT2G04240.2 RING/U-box superfamily protein1.1e-0430.58Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSAS---GNSSSSEEEYDWENRRERR---ISITQFKTLGQSFNGETEE---EFVSRCVMA
        MGLS+ P  +EG+L   V+++NT +S++ +K  VRS + ++  S    +SS S      EN          + Q ++  + F   T     E + RC   
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSAS---GNSSSSEEEYDWENRRERR---ISITQFKTLGQSFNGETEE---EFVSRCVMA

Query:  ---ECCVCLCRFEADEEVSEL
           EC VCL +F+ D E+++L
Subjt:  ---ECCVCLCRFEADEEVSEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCTCTCAAATTTTCCTCCTTCAGCTGAAGGGGTGTTGCTGTTGCCAGTTTTAGTGATGAACACTGTAATGTCAATGGCGTTTTTGAAGAATTTTGTGAGATCTGT
TATACAAATGATGAGTGCCAGTGGGAATTCTTCGAGTTCTGAGGAAGAATACGATTGGGAAAATAGAAGAGAAAGAAGGATTTCAATTACTCAGTTCAAAACTTTGGGGC
AAAGCTTCAATGGGGAAACAGAGGAGGAGTTTGTTTCGAGGTGTGTTATGGCAGAGTGTTGTGTTTGTCTTTGTAGGTTTGAAGCTGATGAAGAAGTTAGTGAGTTGTCT
TATAAATCATTTACTGTTTTATTAAACTCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTCTCTCAAATTTTCCTCCTTCAGCTGAAGGGGTGTTGCTGTTGCCAGTTTTAGTGATGAACACTGTAATGTCAATGGCGTTTTTGAAGAATTTTGTGAGATCTGT
TATACAAATGATGAGTGCCAGTGGGAATTCTTCGAGTTCTGAGGAAGAATACGATTGGGAAAATAGAAGAGAAAGAAGGATTTCAATTACTCAGTTCAAAACTTTGGGGC
AAAGCTTCAATGGGGAAACAGAGGAGGAGTTTGTTTCGAGGTGTGTTATGGCAGAGTGTTGTGTTTGTCTTTGTAGGTTTGAAGCTGATGAAGAAGTTAGTGAGTTGTCT
TATAAATCATTTACTGTTTTATTAAACTCCTAG
Protein sequenceShow/hide protein sequence
MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRRERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSELS
YKSFTVLLNS