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CsGy5G024335 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G024335
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionProtein IDA-like
Genome locationGy14Chr5:28954038..28954949
RNA-Seq ExpressionCsGy5G024335
SyntenyCsGy5G024335
Gene Ontology termsGO:0010227 - floral organ abscission (biological process)
GO:0005615 - extracellular space (cellular component)
InterPro domainsIPR039639 - Protein IDA-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034518.1 putative Membrane lipoprotein [Cucumis melo var. makuwa]3.72e-3481.32Show/hide
Query:  SSSS----QTSIPIFILLLLLLLLSGLSSATRPGKTMEFTEMNPDMSNS-YKT-AFRYGGQTFSFLPKGVPIPPSGPSDRHNSVVDSLPPN
        SSSS    Q SIPIFILLLLLL  SG SSATRPG TMEF    PDMSNS YKT AFRY GQTF FLPKGVPIPPSGPSDRHNSVVDSLPPN
Subjt:  SSSS----QTSIPIFILLLLLLLLSGLSSATRPGKTMEFTEMNPDMSNS-YKT-AFRYGGQTFSFLPKGVPIPPSGPSDRHNSVVDSLPPN
KAG6601330.1 Protein IDA, partial [Cucurbita argyrosperma subsp. sororia]1.03e-3070.93Show/hide
Query:  SSSSQTSIPIFILLLLLLLLSGLSSATRPGKTMEFTEMNPDMSN-SYKTAFRYGGQTFSFLPKGVPIPPSGPSDRHNSVVDSLPPN
        SSSS +S    I +LLLLL+SG  SATRPGKTM   E+ PD+SN +YKT FRY GQTFS+LP+GVPIPPSGPSDRHNS+VDSLPP+
Subjt:  SSSSQTSIPIFILLLLLLLLSGLSSATRPGKTMEFTEMNPDMSN-SYKTAFRYGGQTFSFLPKGVPIPPSGPSDRHNSVVDSLPPN
KAG7032113.1 Protein IDA, partial [Cucurbita argyrosperma subsp. argyrosperma]7.30e-3069.77Show/hide
Query:  SSSSQTSIPIFILLLLLLLLSGLSSATRPGKTMEFTEMNPDMSN-SYKTAFRYGGQTFSFLPKGVPIPPSGPSDRHNSVVDSLPPN
        SSSS +S    I +LLLLL+SG  SATRPGKTM   E+ PD+ N +YKT FRY GQTFS+LP+GVPIPPSGPSDRHNS+VDSLPP+
Subjt:  SSSSQTSIPIFILLLLLLLLSGLSSATRPGKTMEFTEMNPDMSN-SYKTAFRYGGQTFSFLPKGVPIPPSGPSDRHNSVVDSLPPN
KGN52035.1 hypothetical protein Csa_008746 [Cucumis sativus]2.80e-54100Show/hide
Query:  MPSSSSQTSIPIFILLLLLLLLSGLSSATRPGKTMEFTEMNPDMSNSYKTAFRYGGQTFSFLPKGVPIPPSGPSDRHNSVVDSLPPN
        MPSSSSQTSIPIFILLLLLLLLSGLSSATRPGKTMEFTEMNPDMSNSYKTAFRYGGQTFSFLPKGVPIPPSGPSDRHNSVVDSLPPN
Subjt:  MPSSSSQTSIPIFILLLLLLLLSGLSSATRPGKTMEFTEMNPDMSNSYKTAFRYGGQTFSFLPKGVPIPPSGPSDRHNSVVDSLPPN
TYK09072.1 putative Membrane lipoprotein [Cucumis melo var. makuwa]4.19e-3481.32Show/hide
Query:  SSSS----QTSIPIFILLLLLLLLSGLSSATRPGKTMEFTEMNPDMSNS-YKT-AFRYGGQTFSFLPKGVPIPPSGPSDRHNSVVDSLPPN
        SSSS    Q SIPIFILLLLLL  SG SSATRPG TMEF    PDMSNS YKT AFRY GQTF FLPKGVPIPPSGPSDRHNSVVDSLPPN
Subjt:  SSSS----QTSIPIFILLLLLLLLSGLSSATRPGKTMEFTEMNPDMSNS-YKT-AFRYGGQTFSFLPKGVPIPPSGPSDRHNSVVDSLPPN
TrEMBL top hitse value%identityAlignment
A0A0A0KR07 Uncharacterized protein1.36e-54100Show/hide
Query:  MPSSSSQTSIPIFILLLLLLLLSGLSSATRPGKTMEFTEMNPDMSNSYKTAFRYGGQTFSFLPKGVPIPPSGPSDRHNSVVDSLPPN
        MPSSSSQTSIPIFILLLLLLLLSGLSSATRPGKTMEFTEMNPDMSNSYKTAFRYGGQTFSFLPKGVPIPPSGPSDRHNSVVDSLPPN
Subjt:  MPSSSSQTSIPIFILLLLLLLLSGLSSATRPGKTMEFTEMNPDMSNSYKTAFRYGGQTFSFLPKGVPIPPSGPSDRHNSVVDSLPPN
A0A1R3J5S6 Uncharacterized protein3.32e-1951.76Show/hide
Query:  SSSSQTSIPIFILLLLLLLLSGLSSATRPGKTMEFTEMNPDMSNSYK----TAFRYGGQTFSFLPKGVPIPPSGPSDRHNSVVDS
        S + Q S  I ++ L+++LL+G S ATRPG+TM  T+ +     S++    T+F+Y GQ F+F PKG PIPPSGPS RHNSVVDS
Subjt:  SSSSQTSIPIFILLLLLLLLSGLSSATRPGKTMEFTEMNPDMSNSYK----TAFRYGGQTFSFLPKGVPIPPSGPSDRHNSVVDS
A0A5A7SV51 Putative Membrane lipoprotein1.80e-3481.32Show/hide
Query:  SSSS----QTSIPIFILLLLLLLLSGLSSATRPGKTMEFTEMNPDMSNS-YKT-AFRYGGQTFSFLPKGVPIPPSGPSDRHNSVVDSLPPN
        SSSS    Q SIPIFILLLLLL  SG SSATRPG TMEF    PDMSNS YKT AFRY GQTF FLPKGVPIPPSGPSDRHNSVVDSLPPN
Subjt:  SSSS----QTSIPIFILLLLLLLLSGLSSATRPGKTMEFTEMNPDMSNS-YKT-AFRYGGQTFSFLPKGVPIPPSGPSDRHNSVVDSLPPN
A0A5D3CCP4 Putative Membrane lipoprotein2.03e-3481.32Show/hide
Query:  SSSS----QTSIPIFILLLLLLLLSGLSSATRPGKTMEFTEMNPDMSNS-YKT-AFRYGGQTFSFLPKGVPIPPSGPSDRHNSVVDSLPPN
        SSSS    Q SIPIFILLLLLL  SG SSATRPG TMEF    PDMSNS YKT AFRY GQTF FLPKGVPIPPSGPSDRHNSVVDSLPPN
Subjt:  SSSS----QTSIPIFILLLLLLLLSGLSSATRPGKTMEFTEMNPDMSNS-YKT-AFRYGGQTFSFLPKGVPIPPSGPSDRHNSVVDSLPPN
F6HF28 Uncharacterized protein6.39e-1847.52Show/hide
Query:  PSSSSQTSIPIF-------ILLLLLLLLSGLSSATRPGKTM--------EFTEMNPDMSNSYKTAFRYGGQTFSFLPKGVPIPPSGPSDRHNSVVDSLPP
        PSSSS +  P          L+ +  L+ G  +ATRPG+ M        E   MNP   + +KT+F+ GGQ F+F PKGVPIPPSGPS RHNS VDS P 
Subjt:  PSSSSQTSIPIF-------ILLLLLLLLSGLSSATRPGKTM--------EFTEMNPDMSNSYKTAFRYGGQTFSFLPKGVPIPPSGPSDRHNSVVDSLPP

Query:  N
        N
Subjt:  N
SwissProt top hitse value%identityAlignment
Q8LAD7 Protein IDA4.7e-0745.45Show/hide
Query:  IFILLLLLLLLSGLSS---ATRPGKTMEFTEMNPDMSNSYKTAFRYGGQTFSFLPKGVPIPPSGPSDRHNSVVDSLP
        + +LL  +L L+  SS   A R G TME       M  + K         F +LPKGVPIPPS PS RHNS V+SLP
Subjt:  IFILLLLLLLLSGLSS---ATRPGKTMEFTEMNPDMSNSYKTAFRYGGQTFSFLPKGVPIPPSGPSDRHNSVVDSLP
Arabidopsis top hitse value%identityAlignment
AT1G68765.1 Putative membrane lipoprotein3.4e-0845.45Show/hide
Query:  IFILLLLLLLLSGLSS---ATRPGKTMEFTEMNPDMSNSYKTAFRYGGQTFSFLPKGVPIPPSGPSDRHNSVVDSLP
        + +LL  +L L+  SS   A R G TME       M  + K         F +LPKGVPIPPS PS RHNS V+SLP
Subjt:  IFILLLLLLLLSGLSS---ATRPGKTMEFTEMNPDMSNSYKTAFRYGGQTFSFLPKGVPIPPSGPSDRHNSVVDSLP
AT3G25655.1 inflorescence deficient in abscission (IDA)-like 16.6e-0436.99Show/hide
Query:  LLLLLLLLSGLSSATR---PGKTMEFTEMNPDMSNSYKTAFRYGGQTFSFLPKGVPIPPSGPSDRHNSVVDSL
        L ++ LL+ G  +AT    P K  E   +           F + G+ F    K V +PPSGPS RHNSVV++L
Subjt:  LLLLLLLLSGLSSATR---PGKTMEFTEMNPDMSNSYKTAFRYGGQTFSFLPKGVPIPPSGPSDRHNSVVDSL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTCCTCTTCCTCCCAAACCTCCATACCCATTTTCATCCTCCTCCTCCTCCTCCTTCTTCTCTCCGGGCTTTCCTCCGCAACTCGACCGGGTAAGACCATGGAGTT
TACGGAGATGAATCCCGACATGTCGAATTCTTACAAAACTGCCTTCCGATACGGTGGTCAGACCTTCAGCTTCCTCCCCAAAGGCGTTCCCATTCCTCCTTCCGGCCCTT
CCGACCGCCACAACTCCGTAGTCGACTCTCTTCCTCCCAATTAA
mRNA sequenceShow/hide mRNA sequence
TGCAATTAATTCCTTCATAAACCACAATGCCTTCCTCTTCCTCCCAAACCTCCATACCCATTTTCATCCTCCTCCTCCTCCTCCTTCTTCTCTCCGGGCTTTCCTCCGCA
ACTCGACCGGGTAAGACCATGGAGTTTACGGAGATGAATCCCGACATGTCGAATTCTTACAAAACTGCCTTCCGATACGGTGGTCAGACCTTCAGCTTCCTCCCCAAAGG
CGTTCCCATTCCTCCTTCCGGCCCTTCCGACCGCCACAACTCCGTAGTCGACTCTCTTCCTCCCAATTAAATTCGATTCATATATACGATGGGTATCATTTTTATTTTCT
TCTTCTCATTTATATATACACTGTATAGAAAGAAAGAAAAGAAAAACAACAATCAGTCAATTTTCTGACACACATATTGTAATGTATTAATTATTTTCACCCAATGAAAT
TAATCTTTGCTTGTTTTAATTTCTCAAGTGTGTGTTTGTGTTGAGGAAGTTACGAGTGGCATGAAAGGAAAATTTGGTAGTGTTAGGAAATTTTTTAAAAAAAATGTAGA
AAGAGAAAAGAAAAATTCGGTAGAAAGTGGGGGAAAACACAAAGAAGAAAGTAGAATGAATCGTCTGAAATTCAACTTCATTAAAAGCAGTGGCGGATTATTGATTATTT
AGTGAGAGGAAAAAGACATCCACGTTCTTCATCCATTCCATTAACGCCCATTTAACATTAACTTATCAACCATTAACTAACCCTTAACCCTTCATTCTTTTTTCTTCTTC
TAAACTATATTATAACCCAATTTTAACTGGTGAGGAAGTGATAGAGTTTTCTCCCATTCCCATCAACTATTTTATTTGATTTTGAACCAAAAATCCCATAATTATAAGCA
TAGAATCTAATGATATATCATTTTGTTACGAC
Protein sequenceShow/hide protein sequence
MPSSSSQTSIPIFILLLLLLLLSGLSSATRPGKTMEFTEMNPDMSNSYKTAFRYGGQTFSFLPKGVPIPPSGPSDRHNSVVDSLPPN