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CsGy5G025860 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G025860
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionR3H domain-containing protein 2-like
Genome locationGy14Chr5:29890076..29892576
RNA-Seq ExpressionCsGy5G025860
SyntenyCsGy5G025860
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034658.1 R3H domain-containing protein 2-like [Cucumis melo var. makuwa]5.17e-1370.69Show/hide
Query:  EFRVSVLCFTTEGSAAENIEGPESWKVAELDEAVRQRNSILEVLNILPTVLLSQIIRF
        EFRVSV CFT EGSAAE+IE PESWKVAE DEAVRQ NSILEV   L +  LS+ ++F
Subjt:  EFRVSVLCFTTEGSAAENIEGPESWKVAELDEAVRQRNSILEVLNILPTVLLSQIIRF
KGN52196.1 hypothetical protein Csa_008631 [Cucumis sativus]3.71e-6298.17Show/hide
Query:  MHFLSISSLAVIVIAPENLPSPSIAPNSVPRLILVYEFRVSVLCFTTEGSAAENIEGPESWKVAELDEAVRQRNSILEVLNILPTVLLSQIIRFLLKCLK
        MHFLSISSLAVIVIAPENLPSPSIAPNSVPRLIL  EFRVSVLCFTTEGSAAENIEGPESWKVAELDEAVRQRNSILEVLNILPTVLLSQIIRFLLKCLK
Subjt:  MHFLSISSLAVIVIAPENLPSPSIAPNSVPRLILVYEFRVSVLCFTTEGSAAENIEGPESWKVAELDEAVRQRNSILEVLNILPTVLLSQIIRFLLKCLK

Query:  ILSVRLIGS
        ILSVRLIGS
Subjt:  ILSVRLIGS
TrEMBL top hitse value%identityAlignment
A0A0A0KWM8 Uncharacterized protein1.80e-6298.17Show/hide
Query:  MHFLSISSLAVIVIAPENLPSPSIAPNSVPRLILVYEFRVSVLCFTTEGSAAENIEGPESWKVAELDEAVRQRNSILEVLNILPTVLLSQIIRFLLKCLK
        MHFLSISSLAVIVIAPENLPSPSIAPNSVPRLIL  EFRVSVLCFTTEGSAAENIEGPESWKVAELDEAVRQRNSILEVLNILPTVLLSQIIRFLLKCLK
Subjt:  MHFLSISSLAVIVIAPENLPSPSIAPNSVPRLILVYEFRVSVLCFTTEGSAAENIEGPESWKVAELDEAVRQRNSILEVLNILPTVLLSQIIRFLLKCLK

Query:  ILSVRLIGS
        ILSVRLIGS
Subjt:  ILSVRLIGS
A0A5D3CFX4 R3H domain-containing protein 2-like2.50e-1370.69Show/hide
Query:  EFRVSVLCFTTEGSAAENIEGPESWKVAELDEAVRQRNSILEVLNILPTVLLSQIIRF
        EFRVSV CFT EGSAAE+IE PESWKVAE DEAVRQ NSILEV   L +  LS+ ++F
Subjt:  EFRVSVLCFTTEGSAAENIEGPESWKVAELDEAVRQRNSILEVLNILPTVLLSQIIRF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTTTCTCTCCATTTCTTCTCTGGCTGTGATCGTAATCGCTCCGGAAAATTTACCGTCTCCATCAATCGCGCCAAATTCCGTCCCTCGATTAATTTTGGTGTACGA
GTTTAGAGTTTCGGTCCTTTGCTTTACCACGGAGGGCTCTGCAGCGGAAAACATCGAAGGTCCTGAGTCGTGGAAGGTCGCAGAGTTGGATGAGGCCGTGAGACAACGGA
ATTCCATATTAGAGGTATTAAATATTCTGCCGACGGTGCTTCTCTCTCAGATCATTCGGTTCCTGCTGAAGTGTTTGAAGATTCTATCAGTCAGGTTGATCGGTTCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCATTTTCTCTCCATTTCTTCTCTGGCTGTGATCGTAATCGCTCCGGAAAATTTACCGTCTCCATCAATCGCGCCAAATTCCGTCCCTCGATTAATTTTGGTGTACGA
GTTTAGAGTTTCGGTCCTTTGCTTTACCACGGAGGGCTCTGCAGCGGAAAACATCGAAGGTCCTGAGTCGTGGAAGGTCGCAGAGTTGGATGAGGCCGTGAGACAACGGA
ATTCCATATTAGAGGTATTAAATATTCTGCCGACGGTGCTTCTCTCTCAGATCATTCGGTTCCTGCTGAAGTGTTTGAAGATTCTATCAGTCAGGTTGATCGGTTCCTAG
CGTAGCCTTTCGGAATCCTTAAGAGTTTAGATTTCGGTCCTTTGATTTACCATGGAGGGCTCTGCAGTGGAGGATATTGAAGGTCCTGAGTCATGGAAGGTGGCAGAGGA
TGAGGCCGTGAGACAATGGAATTTCATATGAGAGGCATTATATATTCTTTCGACGGTGCTTCTCTCTCAGATTGTTCGATTCCTGCTGAAATGTTTGAAGATTCTATCAG
TCAGGTTGATCGGTTCCTAGCGAAGCCTTTCAGAATCCTCAAATTGTAAACTGCGCCACCATTCCCTTTTGTGCCTATGACGTC
Protein sequenceShow/hide protein sequence
MHFLSISSLAVIVIAPENLPSPSIAPNSVPRLILVYEFRVSVLCFTTEGSAAENIEGPESWKVAELDEAVRQRNSILEVLNILPTVLLSQIIRFLLKCLKILSVRLIGS