; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy5G026100 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G026100
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionprotein BTR1
Genome locationGy14Chr5:30148049..30154164
RNA-Seq ExpressionCsGy5G026100
SyntenyCsGy5G026100
Gene Ontology termsGO:0010468 - regulation of gene expression (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR004087 - K Homology domain
IPR004088 - K Homology domain, type 1
IPR036612 - K Homology domain, type 1 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142445.1 protein BTR1 isoform X1 [Cucumis sativus]3.00e-19490.49Show/hide
Query:  MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFL---------------------SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL
        MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFL                     SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL
Subjt:  MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFL---------------------SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL

Query:  VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS
        VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS
Subjt:  VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS

Query:  MNYPFSYPTSFNAMNYGSNGGGTGGRFQNNK----------EERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITG
        MNYPFSYPTSFNAMNYGSNGGGTGGRFQNNK          EERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITG
Subjt:  MNYPFSYPTSFNAMNYGSNGGGTGGRFQNNK----------EERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITG

Query:  SQRAIRAAESMILQKVAYASERVLAQ
        SQRAIRAAESMILQKVAYASERVLAQ
Subjt:  SQRAIRAAESMILQKVAYASERVLAQ

XP_008446807.1 PREDICTED: protein BTR1 [Cucumis melo]4.05e-19492.41Show/hide
Query:  MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFL---------------------SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL
        MESTESSYVSSPEAPAKRSPPPPKSPNSDNM+KATYIRFL                     SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL
Subjt:  MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFL---------------------SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL

Query:  VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS
        VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS
Subjt:  VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS

Query:  MNYPFSYPTSFNAMNYGSNGGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAES
        MNYPFSYPTS+NAMNYGSNGG TGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAES
Subjt:  MNYPFSYPTSFNAMNYGSNGGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAES

Query:  MILQKVAYASERVLAQ
        MILQKVAYASERVLAQ
Subjt:  MILQKVAYASERVLAQ

XP_011655857.1 protein BTR1 isoform X2 [Cucumis sativus]1.31e-19793.35Show/hide
Query:  MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFL---------------------SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL
        MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFL                     SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL
Subjt:  MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFL---------------------SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL

Query:  VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS
        VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS
Subjt:  VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS

Query:  MNYPFSYPTSFNAMNYGSNGGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAES
        MNYPFSYPTSFNAMNYGSNGGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAES
Subjt:  MNYPFSYPTSFNAMNYGSNGGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAES

Query:  MILQKVAYASERVLAQ
        MILQKVAYASERVLAQ
Subjt:  MILQKVAYASERVLAQ

XP_022139256.1 protein BTR1 [Momordica charantia]1.84e-19090.51Show/hide
Query:  MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFL---------------------SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL
        MESTESSYVSSPEAPAKRSPPPPKSPNSDNM+KATYIRFL                     SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL
Subjt:  MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFL---------------------SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL

Query:  VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS
        VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYM STDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS
Subjt:  VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS

Query:  MNYPFSYPTSFNAMNYGSNGGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAES
        MNYPFSYPTS+N MNYGSNGG  GGRFQNNKEER+NSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIR AES
Subjt:  MNYPFSYPTSFNAMNYGSNGGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAES

Query:  MILQKVAYASERVLAQ
        MI+QKVAYASERVLAQ
Subjt:  MILQKVAYASERVLAQ

XP_038893255.1 protein BTR1 [Benincasa hispida]5.75e-19492.41Show/hide
Query:  MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFL---------------------SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL
        MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFL                     SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL
Subjt:  MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFL---------------------SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL

Query:  VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS
        VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYM STDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS
Subjt:  VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS

Query:  MNYPFSYPTSFNAMNYGSNGGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAES
        MNYPFSYPTS+NAMNYGSNGG TGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAES
Subjt:  MNYPFSYPTSFNAMNYGSNGGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAES

Query:  MILQKVAYASERVLAQ
        MILQKVAYASERVLAQ
Subjt:  MILQKVAYASERVLAQ

TrEMBL top hitse value%identityAlignment
A0A0A0KWP6 Uncharacterized protein6.36e-19893.35Show/hide
Query:  MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFL---------------------SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL
        MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFL                     SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL
Subjt:  MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFL---------------------SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL

Query:  VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS
        VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS
Subjt:  VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS

Query:  MNYPFSYPTSFNAMNYGSNGGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAES
        MNYPFSYPTSFNAMNYGSNGGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAES
Subjt:  MNYPFSYPTSFNAMNYGSNGGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAES

Query:  MILQKVAYASERVLAQ
        MILQKVAYASERVLAQ
Subjt:  MILQKVAYASERVLAQ

A0A1S3BFZ8 protein BTR11.96e-19492.41Show/hide
Query:  MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFL---------------------SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL
        MESTESSYVSSPEAPAKRSPPPPKSPNSDNM+KATYIRFL                     SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL
Subjt:  MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFL---------------------SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL

Query:  VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS
        VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS
Subjt:  VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS

Query:  MNYPFSYPTSFNAMNYGSNGGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAES
        MNYPFSYPTS+NAMNYGSNGG TGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAES
Subjt:  MNYPFSYPTSFNAMNYGSNGGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAES

Query:  MILQKVAYASERVLAQ
        MILQKVAYASERVLAQ
Subjt:  MILQKVAYASERVLAQ

A0A6J1CC53 protein BTR18.89e-19190.51Show/hide
Query:  MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFL---------------------SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL
        MESTESSYVSSPEAPAKRSPPPPKSPNSDNM+KATYIRFL                     SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL
Subjt:  MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFL---------------------SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL

Query:  VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS
        VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYM STDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS
Subjt:  VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS

Query:  MNYPFSYPTSFNAMNYGSNGGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAES
        MNYPFSYPTS+N MNYGSNGG  GGRFQNNKEER+NSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIR AES
Subjt:  MNYPFSYPTSFNAMNYGSNGGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAES

Query:  MILQKVAYASERVLAQ
        MI+QKVAYASERVLAQ
Subjt:  MILQKVAYASERVLAQ

A0A6J1HU77 protein BTR1-like7.75e-18485.2Show/hide
Query:  MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFL---------------------SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL
        MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEK TYIRFL                     SQSGARIQLSRNHEFFPGTTDRIIMVSG+INEILKAM+L
Subjt:  MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFL---------------------SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL

Query:  VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS
        VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYM STDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS
Subjt:  VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS

Query:  MNYPFSYPTSFNAMNYGSNGGGTGGRFQNNK---------------EERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRK
        MNYPFSYPTS+NA+NY SNGG  GGRF NNK               EER+NSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRK
Subjt:  MNYPFSYPTSFNAMNYGSNGGGTGGRFQNNK---------------EERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRK

Query:  VTITGSQRAIRAAESMILQKVAYASERVLAQ
        VTITGSQRAIR+AESMI+QKVAYASERVLAQ
Subjt:  VTITGSQRAIRAAESMILQKVAYASERVLAQ

A0A6J1JWC0 protein BTR1-like3.28e-18789.03Show/hide
Query:  MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFL---------------------SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL
        MESTESSYVSSPEAP KRSPPPPKSPNSDNMEKATYIRFL                     SQSGARIQLSRNHEFFPGTTDRIIMVSG+INEILKAMEL
Subjt:  MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFL---------------------SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL

Query:  VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS
        VLAKLLSELHAEE DD EPRTKVRLIVPHSSCGAIIGKGGSTIK+FIEDSQAGIKISPQDNNYM STDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS
Subjt:  VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS

Query:  MNYPFSYPTSFNAMNYGSNGG---GTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRA
        MNYPFSYPTS+NAMN   N G   GTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRA
Subjt:  MNYPFSYPTSFNAMNYGSNGG---GTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRA

Query:  AESMILQKVAYASERVLAQ
        AESMILQKVAYASERVLAQ
Subjt:  AESMILQKVAYASERVLAQ

SwissProt top hitse value%identityAlignment
P51513 RNA-binding protein Nova-11.5e-2022.3Show/hide
Query:  TYIRFLSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMELVLAKLLSEL-----HAEEGDDVEPRT-----------------------------
        T ++   ++GA I+LS++ +F+PGTT+R+ ++ G++ E L A+   +A+ + E+       E    ++P+T                             
Subjt:  TYIRFLSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMELVLAKLLSEL-----HAEEGDDVEPRT-----------------------------

Query:  ---KVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPH----------------------
           +V++IVP+S+ G IIGKGG+T+K+ +E S A +++S Q  + +   +R+VT+SG  E+  +A +LI+ K+ EDP                       
Subjt:  ---KVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPH----------------------

Query:  ----------------------------------------------YTQSMNYPFSYPTSFNAMNY----------------------------------
                                                       T ++N   SY  + N +                                    
Subjt:  ----------------------------------------------YTQSMNYPFSYPTSFNAMNY----------------------------------

Query:  ----GSNGGGTGGRF------------------------------QNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTT
            GS  GGT G F                              + + +   + + I V +  +G ++G+GG+ ++E  + +GARI+IS +G+F+ GT 
Subjt:  ----GSNGGGTGGRF------------------------------QNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTT

Query:  DRKVTITGSQRAIRAAESMILQKVAY
        +RKVTITG+  A +AA+ +I Q++ Y
Subjt:  DRKVTITGSQRAIRAAESMILQKVAY

Q2PFW9 RNA-binding protein Nova-11.9e-2323.63Show/hide
Query:  TYIRFLSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMELVLAKLLSEL-----HAEEGDDVEPRT--------KVRLIVPHSSCGAIIGKGGST
        T ++   ++GA I+LS++ +F+PGTT+R+ ++ G++ E L A+   +A+ + E+       E    ++P+T        +V++IVP+S+ G IIGKGG+T
Subjt:  TYIRFLSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMELVLAKLLSEL-----HAEEGDDVEPRT--------KVRLIVPHSSCGAIIGKGGST

Query:  IKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPH----------------------------------------------
        +K+ +E S A +++S Q  + +   +R+VT+SG  E+  +A +LI+ K+ EDP                                               
Subjt:  IKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPH----------------------------------------------

Query:  ----------------------YTQSMNYPFSYPTSFNAMNY--------------------------------------GSNGGGTGGRF---------
                               T ++N   SY  + N +                                        GS  GGT G F         
Subjt:  ----------------------YTQSMNYPFSYPTSFNAMNY--------------------------------------GSNGGGTGGRF---------

Query:  ---------------------QNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMILQKV
                             + + +   + + I V +  +G ++G+GG+ ++E  + +GARI+IS +G+F+ GT +RKVTITG+  A +AA+ +I Q++
Subjt:  ---------------------QNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMILQKV

Query:  AY
         Y
Subjt:  AY

Q80WA4 RNA-binding protein Nova-1 (Fragment)6.5e-2424.38Show/hide
Query:  TYIRFLSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMELVLAKLLSEL-----HAEEGDDVEPRT--------KVRLIVPHSSCGAIIGKGGST
        T ++   ++GA I+LS++ +F+PGTT+R+ ++ G+I E L A+   +A+ + E+       E    ++P+T        +V++IVP+S+ G IIGKGG+T
Subjt:  TYIRFLSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMELVLAKLLSEL-----HAEEGDDVEPRT--------KVRLIVPHSSCGAIIGKGGST

Query:  IKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPF---------SYPTSF----------------------
        +K+ +E S A +++S Q  + +   +R+VT+SG  E+  +A +LI+ K+ EDP     +N  +         S PT F                      
Subjt:  IKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPF---------SYPTSF----------------------

Query:  ------------------------NAMN---------------------------------------------------YGSNGGGTGGRF---------
                                +A+N                                                    GS  GGT G F         
Subjt:  ------------------------NAMN---------------------------------------------------YGSNGGGTGGRF---------

Query:  ---------------------QNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMILQKV
                             + + +   + + I V +  +G ++G+GG+ ++E  + +GARI+IS +G+F+ GT +RKVTITG+  A +AA+ +I Q++
Subjt:  ---------------------QNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMILQKV

Query:  AY
         Y
Subjt:  AY

Q9JKN6 RNA-binding protein Nova-18.7e-2122.54Show/hide
Query:  TYIRFLSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMELVLAKLLSEL-----HAEEGDDVEPRT-----------------------------
        T ++   ++GA I+LS++ +F+PGTT+R+ ++ G+I E L A+   +A+ + E+       E    ++P+T                             
Subjt:  TYIRFLSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMELVLAKLLSEL-----HAEEGDDVEPRT-----------------------------

Query:  ---KVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPH----------------------
           +V++IVP+S+ G IIGKGG+T+K+ +E S A +++S Q  + +   +R+VT+SG  E+  +A +LI+ K+ EDP                       
Subjt:  ---KVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPH----------------------

Query:  ----------------------------------------------YTQSMNYPFSYPTSFNAMNY----------------------------------
                                                       T ++N   SY  + N +                                    
Subjt:  ----------------------------------------------YTQSMNYPFSYPTSFNAMNY----------------------------------

Query:  ----GSNGGGTGGRF------------------------------QNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTT
            GS  GGT G F                              + + +   + + I V +  +G ++G+GG+ ++E  + +GARI+IS +G+F+ GT 
Subjt:  ----GSNGGGTGGRF------------------------------QNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTT

Query:  DRKVTITGSQRAIRAAESMILQKVAY
        +RKVTITG+  A +AA+ +I Q++ Y
Subjt:  DRKVTITGSQRAIRAAESMILQKVAY

Q9LZ82 Protein BTR11.9e-10062.82Show/hide
Query:  MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFL---------------------SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL
        MESTES    SPE  AKRSP P  S  +D+ EK T+IRFL                     ++SGARIQLSRN EFFPGTTDRIIM+SGSI E++  +EL
Subjt:  MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFL---------------------SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL

Query:  VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS
        +L KL SELHAE+G++VEPR ++RL+VP+SSCG IIGKGG+TIKSFIE+S+AGIKISP DN +   +DRLVTLSGT EEQMRA DLI++KL+ED HY+Q+
Subjt:  VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS

Query:  MNYPFSYPTSFNAMNYGSNGGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAES
        ++ P+SY   +N++NY  N  G+GG++QN+KEE + ++TIGV+D HIGLV+GRGGRNI+EI+Q +GARIKISDRGDFMSGTTDRKV+ITG QRAI+ AE+
Subjt:  MNYPFSYPTSFNAMNYGSNGGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAES

Query:  MILQKVAYASER
        MI QKV  A+ER
Subjt:  MILQKVAYASER

Arabidopsis top hitse value%identityAlignment
AT1G33680.1 KH domain-containing protein5.4e-1032.54Show/hide
Query:  IRFLS-QSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPR---TKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAG
        +R+L   SGA+IQ+ R+ E  P +  R + + G+++ I KA +L+ A +++E+ A     +  R    ++ + VP    G IIG+GG TIK+    S+A 
Subjt:  IRFLS-QSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPR---TKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAG

Query:  IKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSYPTSFNAMNYGSNGGG
        I++ PQ N   AS +R V +SG   +   AT LI   + +D         P  Y   FN   Y   G G
Subjt:  IKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSYPTSFNAMNYGSNGGG

AT2G25970.1 KH domain-containing protein3.3e-0726.88Show/hide
Query:  TKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSYPTSFNAMNYGSNG
        T  ++ +P+   G IIGKGG TIK     S A I+++   +       R V L+GT ++  +A  LI   L E                   A N   +G
Subjt:  TKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSYPTSFNAMNYGSNG

Query:  GGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKI----SDRGDFMSGTTDRKVTITGSQRAIRAAESMI
        GG G R     +   +   + + +  +GL++G+GG  I  +   +GARI++       GD    T +R + I G    I  A+ ++
Subjt:  GGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKI----SDRGDFMSGTTDRKVTITGSQRAIRAAESMI

AT5G04430.1 binding to TOMV RNA 1L (long form)1.3e-10162.82Show/hide
Query:  MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFL---------------------SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL
        MESTES    SPE  AKRSP P  S  +D+ EK T+IRFL                     ++SGARIQLSRN EFFPGTTDRIIM+SGSI E++  +EL
Subjt:  MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFL---------------------SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL

Query:  VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS
        +L KL SELHAE+G++VEPR ++RL+VP+SSCG IIGKGG+TIKSFIE+S+AGIKISP DN +   +DRLVTLSGT EEQMRA DLI++KL+ED HY+Q+
Subjt:  VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS

Query:  MNYPFSYPTSFNAMNYGSNGGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAES
        ++ P+SY   +N++NY  N  G+GG++QN+KEE + ++TIGV+D HIGLV+GRGGRNI+EI+Q +GARIKISDRGDFMSGTTDRKV+ITG QRAI+ AE+
Subjt:  MNYPFSYPTSFNAMNYGSNGGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAES

Query:  MILQKVAYASER
        MI QKV  A+ER
Subjt:  MILQKVAYASER

AT5G04430.2 binding to TOMV RNA 1L (long form)6.9e-9858.86Show/hide
Query:  MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFL---------------------SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL
        MESTES    SPE  AKRSP P  S  +D+ EK T+IRFL                     ++SGARIQLSRN EFFPGTTDRIIM+SGSI E++  +EL
Subjt:  MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFL---------------------SQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMEL

Query:  VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS
        +L KL SELHAE+G++VEPR ++RL+VP+SSCG IIGKGG+TIKSFIE+S+AGIKISP DN +   +DRLVTLSGT EEQMRA DLI++KL+ED HY+Q+
Subjt:  VLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQS

Query:  MNYPFSY---------------------PTSFNAMNYGSNGGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMS
        ++ P+SY                        +N++NY  N  G+GG++QN+KEE + ++TIGV+D HIGLV+GRGGRNI+EI+Q +GARIKISDRGDFMS
Subjt:  MNYPFSY---------------------PTSFNAMNYGSNGGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMS

Query:  GTTDRKVTITGSQRAIRAAESMILQKVAYASER
        GTTDRKV+ITG QRAI+ AE+MI QKV  A+ER
Subjt:  GTTDRKVTITGSQRAIRAAESMILQKVAYASER

AT5G46190.1 RNA-binding KH domain-containing protein5.6e-0723.64Show/hide
Query:  FPGTTDRIIMVSGSINE------------------------ILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQA
        FPG ++R+I +  S++E                        +LK  + ++A L +     + D  + R + RL+VP S C  +IGK GS IK+    ++A
Subjt:  FPGTTDRIIMVSGSINE------------------------ILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQA

Query:  GIKISPQDNNYMAST-----DRLVTLSGTIEEQMRATDLI------VSKLSEDPHYTQSMNYPFS---------------YPTSFNAMNYGSNGGGTGGR
         +K+  +D +  + T     D +V +SG  E   +A   +      VS   + P  T     P S               YP+  +   +G+N     G 
Subjt:  GIKISPQDNNYMAST-----DRLVTLSGTIEEQMRATDLI------VSKLSEDPHYTQSMNYPFS---------------YPTSFNAMNYGSNGGGTGGR

Query:  FQNNKEE------------------------RNNSLTIGV--SDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAES
              E                        R+  L I V  S   IG V+G+GG  I  I QASG+ I+++D     +   D  +T+T ++ +    +S
Subjt:  FQNNKEE------------------------RNNSLTIGV--SDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAES

Query:  MILQKVAYASERV
        M ++ V    E++
Subjt:  MILQKVAYASERV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCTACCGAGTCTTCATATGTCTCGTCTCCGGAGGCTCCTGCCAAGCGATCTCCACCGCCGCCAAAATCGCCAAACTCGGATAATATGGAAAAGGCTACATACAT
AAGGTTTCTTTCACAGTCTGGTGCACGAATCCAGTTGTCACGGAACCATGAATTTTTTCCTGGAACGACTGATAGGATCATTATGGTATCTGGATCAATTAATGAAATAC
TGAAGGCCATGGAACTCGTTCTTGCTAAGTTGTTGAGTGAGCTTCATGCTGAAGAAGGAGACGATGTTGAACCAAGAACAAAAGTGAGACTAATTGTTCCCCATAGTTCA
TGTGGAGCTATAATTGGCAAAGGAGGATCGACTATAAAGTCATTCATTGAGGACTCTCAAGCTGGCATTAAGATATCCCCTCAGGATAACAACTATATGGCATCCACCGA
TAGACTGGTGACACTGTCTGGAACCATAGAGGAACAGATGCGAGCTACTGACTTAATTGTCTCAAAGCTATCTGAAGACCCACACTACACCCAGTCAATGAATTATCCAT
TTTCATATCCGACATCGTTCAACGCTATGAACTATGGATCCAATGGAGGAGGAACTGGAGGGAGGTTTCAAAACAACAAGGAGGAACGAAACAACTCCTTGACTATTGGG
GTTTCAGATGGCCACATCGGATTAGTTGTTGGTCGTGGTGGAAGAAACATACTGGAAATTAGTCAGGCTAGTGGAGCCAGAATTAAGATATCTGATAGGGGTGATTTCAT
GTCCGGAACCACTGACAGGAAAGTAACAATTACGGGGTCACAGAGGGCAATCCGTGCTGCTGAATCGATGATTCTACAAAAAGTAGCATATGCTTCTGAGAGGGTTCTAG
CACAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCTACCGAGTCTTCATATGTCTCGTCTCCGGAGGCTCCTGCCAAGCGATCTCCACCGCCGCCAAAATCGCCAAACTCGGATAATATGGAAAAGGCTACATACAT
AAGGTTTCTTTCACAGTCTGGTGCACGAATCCAGTTGTCACGGAACCATGAATTTTTTCCTGGAACGACTGATAGGATCATTATGGTATCTGGATCAATTAATGAAATAC
TGAAGGCCATGGAACTCGTTCTTGCTAAGTTGTTGAGTGAGCTTCATGCTGAAGAAGGAGACGATGTTGAACCAAGAACAAAAGTGAGACTAATTGTTCCCCATAGTTCA
TGTGGAGCTATAATTGGCAAAGGAGGATCGACTATAAAGTCATTCATTGAGGACTCTCAAGCTGGCATTAAGATATCCCCTCAGGATAACAACTATATGGCATCCACCGA
TAGACTGGTGACACTGTCTGGAACCATAGAGGAACAGATGCGAGCTACTGACTTAATTGTCTCAAAGCTATCTGAAGACCCACACTACACCCAGTCAATGAATTATCCAT
TTTCATATCCGACATCGTTCAACGCTATGAACTATGGATCCAATGGAGGAGGAACTGGAGGGAGGTTTCAAAACAACAAGGAGGAACGAAACAACTCCTTGACTATTGGG
GTTTCAGATGGCCACATCGGATTAGTTGTTGGTCGTGGTGGAAGAAACATACTGGAAATTAGTCAGGCTAGTGGAGCCAGAATTAAGATATCTGATAGGGGTGATTTCAT
GTCCGGAACCACTGACAGGAAAGTAACAATTACGGGGTCACAGAGGGCAATCCGTGCTGCTGAATCGATGATTCTACAAAAAGTAGCATATGCTTCTGAGAGGGTTCTAG
CACAGTGA
Protein sequenceShow/hide protein sequence
MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFLSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSS
CGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSYPTSFNAMNYGSNGGGTGGRFQNNKEERNNSLTIG
VSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMILQKVAYASERVLAQ