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CsGy5G026803 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G026803
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionAquarius
Genome locationGy14Chr5:30567085..30568276
RNA-Seq ExpressionCsGy5G026803
SyntenyCsGy5G026803
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005681 - spliceosomal complex (cellular component)
GO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34203.1 aquarius [Cucumis melo subsp. melo]6.41e-1282.35Show/hide
Query:  SPSRLGFLSHTVAGVTLSLSSRLLLLGVRRRRFLISFSPLAFSQSTSRTSS
        S SRLGF SH VAG+TLSLSSRLLLL VRR R LIS SP AFSQSTSRTSS
Subjt:  SPSRLGFLSHTVAGVTLSLSSRLLLLGVRRRRFLISFSPLAFSQSTSRTSS
KAA0034743.1 aquarius [Cucumis melo var. makuwa]6.40e-1282.35Show/hide
Query:  SPSRLGFLSHTVAGVTLSLSSRLLLLGVRRRRFLISFSPLAFSQSTSRTSS
        S SRLGF SH VAG+TLSLSSRLLLL VRR R LIS SP AFSQSTSRTSS
Subjt:  SPSRLGFLSHTVAGVTLSLSSRLLLLGVRRRRFLISFSPLAFSQSTSRTSS
KGN52296.1 hypothetical protein Csa_008219 [Cucumis sativus]4.17e-56100Show/hide
Query:  MSRSLNLTQFYICFKLPLISSIHAASQHLCDTDSPSRLGFLSHTVAGVTLSLSSRLLLLGVRRRRFLISFSPLAFSQSTSRTSSHFLTRCIL
        MSRSLNLTQFYICFKLPLISSIHAASQHLCDTDSPSRLGFLSHTVAGVTLSLSSRLLLLGVRRRRFLISFSPLAFSQSTSRTSSHFLTRCIL
Subjt:  MSRSLNLTQFYICFKLPLISSIHAASQHLCDTDSPSRLGFLSHTVAGVTLSLSSRLLLLGVRRRRFLISFSPLAFSQSTSRTSSHFLTRCIL
TYK09296.1 aquarius [Cucumis melo var. makuwa]6.40e-1282.35Show/hide
Query:  SPSRLGFLSHTVAGVTLSLSSRLLLLGVRRRRFLISFSPLAFSQSTSRTSS
        S SRLGF SH VAG+TLSLSSRLLLL VRR R LIS SP AFSQSTSRTSS
Subjt:  SPSRLGFLSHTVAGVTLSLSSRLLLLGVRRRRFLISFSPLAFSQSTSRTSS
TrEMBL top hitse value%identityAlignment
A0A0A0KWV6 Uncharacterized protein2.02e-56100Show/hide
Query:  MSRSLNLTQFYICFKLPLISSIHAASQHLCDTDSPSRLGFLSHTVAGVTLSLSSRLLLLGVRRRRFLISFSPLAFSQSTSRTSSHFLTRCIL
        MSRSLNLTQFYICFKLPLISSIHAASQHLCDTDSPSRLGFLSHTVAGVTLSLSSRLLLLGVRRRRFLISFSPLAFSQSTSRTSSHFLTRCIL
Subjt:  MSRSLNLTQFYICFKLPLISSIHAASQHLCDTDSPSRLGFLSHTVAGVTLSLSSRLLLLGVRRRRFLISFSPLAFSQSTSRTSSHFLTRCIL
A0A5A7SW59 Aquarius3.10e-1282.35Show/hide
Query:  SPSRLGFLSHTVAGVTLSLSSRLLLLGVRRRRFLISFSPLAFSQSTSRTSS
        S SRLGF SH VAG+TLSLSSRLLLL VRR R LIS SP AFSQSTSRTSS
Subjt:  SPSRLGFLSHTVAGVTLSLSSRLLLLGVRRRRFLISFSPLAFSQSTSRTSS
A0A5D3CG09 Aquarius3.10e-1282.35Show/hide
Query:  SPSRLGFLSHTVAGVTLSLSSRLLLLGVRRRRFLISFSPLAFSQSTSRTSS
        S SRLGF SH VAG+TLSLSSRLLLL VRR R LIS SP AFSQSTSRTSS
Subjt:  SPSRLGFLSHTVAGVTLSLSSRLLLLGVRRRRFLISFSPLAFSQSTSRTSS
E5GCK6 Aquarius3.10e-1282.35Show/hide
Query:  SPSRLGFLSHTVAGVTLSLSSRLLLLGVRRRRFLISFSPLAFSQSTSRTSS
        S SRLGF SH VAG+TLSLSSRLLLL VRR R LIS SP AFSQSTSRTSS
Subjt:  SPSRLGFLSHTVAGVTLSLSSRLLLLGVRRRRFLISFSPLAFSQSTSRTSS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGATCTTTGAATTTGACCCAATTCTACATCTGCTTCAAACTTCCTCTGATCTCTTCAATTCACGCCGCCTCACAACATCTCTGCGACACCGATTCTCCC
TCTCGTCTTGGCTTCTTATCCCACACAGTCGCCGGCGTTACCCTCTCCCTCTCGTCTCGGCTTCTCCTTCTCGGTGTCCGTCGCCGACGGTTTCTCATTTCATTT
TCTCCGCTGGCGTTCTCTCAGTCTACCTCTCGGACTTCATCCCATTTTTTGACACGCTGCATCCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTAGATCTTTGAATTTGACCCAATTCTACATCTGCTTCAAACTTCCTCTGATCTCTTCAATTCACGCCGCCTCACAACATCTCTGCGACACCGATTCTCCC
TCTCGTCTTGGCTTCTTATCCCACACAGTCGCCGGCGTTACCCTCTCCCTCTCGTCTCGGCTTCTCCTTCTCGGTGTCCGTCGCCGACGGTTTCTCATTTCATTT
TCTCCGCTGGCGTTCTCTCAGTCTACCTCTCGGACTTCATCCCATTTTTTGACACGCTGCATCCTTTGA
Protein sequenceShow/hide protein sequence
MSRSLNLTQFYICFKLPLISSIHAASQHLCDTDSPSRLGFLSHTVAGVTLSLSSRLLLLGVRRRRFLISFSPLAFSQSTSRTSSHFLTRCIL