; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy5G027645 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G027645
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionRNA ligase/cyclic nucleotide phosphodiesterase
Genome locationGy14Chr5:31438437..31442768
RNA-Seq ExpressionCsGy5G027645
SyntenyCsGy5G027645
Gene Ontology termsNA
InterPro domainsIPR009097 - Cyclic phosphodiesterase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142350.1 uncharacterized protein LOC101208638 [Cucumis sativus]1.41e-104100Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG
        FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG

XP_022939795.1 uncharacterized protein LOC111445566 [Cucurbita moschata]4.49e-10196.15Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS+PFLEPTKVESIVKNFASKQEPL LSLSSIGSLPSDNN+LFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG
        FQSQLCEAMRKEGIEIGEEYR GSWIPHC+VAQEVP+ARMAEAFCVLRDLKLPVSG
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG

XP_022964210.1 uncharacterized protein LOC111464296 [Cucurbita moschata]1.57e-10196.79Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS+PFLEPTKVESIVKNFASKQEPL LSL+SIGSLP+DNNILFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG
        FQSQLCEAMRKEGIE GEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG

XP_022993671.1 uncharacterized protein LOC111489594 [Cucurbita maxima]1.57e-10196.79Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS+PFLEPTKVESIVKNFASKQEPL LSLSSIGSLPSDNN+LFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG
        FQSQLCEAMRKEGIEIGEEYR GSWIPHCAVAQEVP+ARMAEAFCVLRDLKLPVSG
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG

XP_038890563.1 uncharacterized protein LOC120080080 [Benincasa hispida]1.35e-10298.08Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESIVKNFASKQEPL LSLSSIGSLPSD+NILFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG
        FQSQLC+AMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG

TrEMBL top hitse value%identityAlignment
A0A0A0KVB2 Uncharacterized protein6.84e-105100Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG
        FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG

A0A1S3C834 uncharacterized protein LOC1034980556.84e-105100Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG
        FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG

A0A5A7T7Y4 RNA ligase/cyclic nucleotide phosphodiesterase6.84e-105100Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG
        FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG

A0A6J1HK74 uncharacterized protein LOC1114642967.60e-10296.79Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS+PFLEPTKVESIVKNFASKQEPL LSL+SIGSLP+DNNILFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG
        FQSQLCEAMRKEGIE GEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG

A0A6J1JWZ6 uncharacterized protein LOC1114895947.60e-10296.79Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS+PFLEPTKVESIVKNFASKQEPL LSLSSIGSLPSDNN+LFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG
        FQSQLCEAMRKEGIEIGEEYR GSWIPHCAVAQEVP+ARMAEAFCVLRDLKLPVSG
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G28140.1 RNA ligase/cyclic nucleotide phosphodiesterase family protein3.0e-5868.94Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS-TPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLL
        MSQG+AIELYFDPALENQVLKAWNV ARRQIST LI  ESRPHITLFS T  ++ TK+E I+K+F+SKQEP++LS SSIGS  SD+N LFL P PS+SL+
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS-TPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLL

Query:  QFQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGNFKD
        Q Q QLCE ++KEG EIGEEYR+ SW+P C+VA +VPK+R++E F VLRDLKL V G   D
Subjt:  QFQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGNFKD

AT3G28140.2 RNA ligase/cyclic nucleotide phosphodiesterase family protein2.7e-5467.32Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS-TPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLL
        MSQG+AIELYFDPALENQVLKAWNV ARRQIST LI  ESRPHITLFS T  ++ TK+E I+K+F+SKQEP++LS SSIGS  SD+N LFL P PS+SL+
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS-TPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLL

Query:  QFQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKL
        Q Q QLCE ++KEG EIGEEYR+ SW+P C+VA +VPK+R++E F V     L
Subjt:  QFQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKL

AT5G40190.1 RNA ligase/cyclic nucleotide phosphodiesterase family protein1.8e-6371.15Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQ
        MS+G+AIELYFDPALENQVLKAWNV ARRQIST+LI  ESRPHITLFST F + T++ES++KNF SKQEP+++S S+IGS  SDNN+LFL P PS+SLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG
         Q+QLC+ ++KE ++IGEEYR+ SW+P C VA +VPK+RMAEAF VLRDLKLPV+G
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACAAGGGTTTGCGATCGAGCTTTATTTCGATCCAGCACTTGAAAATCAAGTTCTCAAGGCTTGGAATGTACTAGCTCGCCGTCAAATTAGTACCCAGCTCATCGA
AATTGAGTCACGTCCTCACATTACCCTTTTCTCTACCCCGTTTCTCGAACCCACAAAAGTTGAATCGATCGTTAAAAATTTCGCTTCTAAACAGGAACCTTTGGCTTTGT
CTTTATCGTCAATTGGTAGCCTTCCCAGCGACAACAACATTCTCTTTCTCGGTCCAGCGCCTTCGATTTCACTTCTTCAATTTCAGTCCCAATTGTGTGAAGCAATGAGG
AAAGAAGGAATTGAAATTGGTGAGGAATATCGCCTTGGTTCGTGGATTCCCCATTGCGCTGTTGCTCAGGAGGTGCCTAAGGCTCGAATGGCTGAGGCATTTTGTGTTCT
AAGGGATTTGAAGCTACCAGTTTCCGGGAACTTCAAAGACAGACAAAGTAGAAACAACAAGAAATTCAACATTGCAGTACAGAATGACAGGCAGATCATTATCCATCAGA
GAACTCAAACAATCTCTTTGAGGACAAGAAAAGAAACAAGAAGACCAAGAAACTTGAAGAGCATTGAGTGGGAATGTAAGGCCTCAGGTGCATCAGAGCTGCCATAG
mRNA sequenceShow/hide mRNA sequence
ACTAGTTGTTAGGAGTATTAAGATATAGTAAAGCGTTGAGTAAATGTTGGTAAAGCATAATTCAAAATTTGGTGTACCAAAGGGATTTGGAGTTCAACGCTGGTTGGCTC
GGTGGTTTAAGCGGGCCGGCCGATGCCCCCTTCTCTCTCTCTCTCTCCCGTTGTCTTCCTCGTTTCGATCCACTCCGAAACACACCCAATCTGGTTCGGCTCTTACCAAG
TGGCTTTGCAGTTCCAACTCTCTCGTATAGCCTTTCCTTTCATCCCTCTCTTTCCCACTTTTAACTTCACTTCACCGCTTTAGGTCTCTATTCGTCCATTTCTTAATCAC
CCCATCTTCTTAAAACTCTCCACTTTCTTCAAATTTCTGTTTTTTGTTTCTCTTTTACCTCTTTCTCGCATTTTTATAGCTTCTTAATCATCTGGGTCCTTTGGATTTCT
TCTGGGTATTATTGTTTTCTTCTGTTTTCTTTGTCTTCTATTTCTAGGGTTTTGAATTTCCCCTTTCGTACACCTCTGATCTTCTCTTGTAATTGGAAATTGGAAATTGG
AAATTTTGGTTTCTGGGTTTTGTTTGTTTCTCTAATTTACTTTCAGGATTTTGAGTTCTAAGGCGATGTCACAAGGGTTTGCGATCGAGCTTTATTTCGATCCAGCACTT
GAAAATCAAGTTCTCAAGGCTTGGAATGTACTAGCTCGCCGTCAAATTAGTACCCAGCTCATCGAAATTGAGTCACGTCCTCACATTACCCTTTTCTCTACCCCGTTTCT
CGAACCCACAAAAGTTGAATCGATCGTTAAAAATTTCGCTTCTAAACAGGAACCTTTGGCTTTGTCTTTATCGTCAATTGGTAGCCTTCCCAGCGACAACAACATTCTCT
TTCTCGGTCCAGCGCCTTCGATTTCACTTCTTCAATTTCAGTCCCAATTGTGTGAAGCAATGAGGAAAGAAGGAATTGAAATTGGTGAGGAATATCGCCTTGGTTCGTGG
ATTCCCCATTGCGCTGTTGCTCAGGAGGTGCCTAAGGCTCGAATGGCTGAGGCATTTTGTGTTCTAAGGGATTTGAAGCTACCAGTTTCCGGGAACTTCAAAGACAGACA
AAGTAGAAACAACAAGAAATTCAACATTGCAGTACAGAATGACAGGCAGATCATTATCCATCAGAGAACTCAAACAATCTCTTTGAGGACAAGAAAAGAAACAAGAAGAC
CAAGAAACTTGAAGAGCATTGAGTGGGAATGTAAGGCCTCAGGTGCATCAGAGCTGCCATAGCTCTGAGCTTCTGCTTCTGTAGCCATGGAAACAAGCAAGCAAGCAACC
CAAATGAGAACCATACCCAAACATTTCCGAAGATCCATGTTCCTTTCTTTCTTTCTTCTTCTTCTTTATGTTCAGACTGAGGAAAGGATGTTCTAATGGTGGGAAATTTA
TAGAGAGAAAAAAAGGATAATTTGGGAGAGAACTTTTTCATTGGAAGTGTCAAAATATGAAGCAAAAATTGTTTGTTACTTTTTCAGATGGATATGAATTTTGGTGTAGA
GAACGGCATATAGGAGACAATTGGAGGCTGATTCAGCTTTCTTCATGGCTTCATGCTTTGCAGGCCAGCCGGCACATCGTTGTTGTTTGAAGAACCATATTAGAACAATA
GGAACCCTTTGTTCCAAATCAGACTCATTTGAATTCGAGGAATGAATGATATGATCTGCAGCAACATACAGACAATAGTGAAGAGGGAGATTTTCAAGTATTATTATACT
TCATACTACTTTCATTCAACATTTGATACAATAATAGACAATAA
Protein sequenceShow/hide protein sequence
MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMR
KEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGNFKDRQSRNNKKFNIAVQNDRQIIIHQRTQTISLRTRKETRRPRNLKSIEWECKASGASELP