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CsGy5G028310 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G028310
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1
Genome locationGy14Chr5:31979498..31981757
RNA-Seq ExpressionCsGy5G028310
SyntenyCsGy5G028310
Gene Ontology termsGO:0000741 - karyogamy (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR033251 - Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial
IPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039497.1 protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa]7.33e-4790Show/hide
Query:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEVS
        MASFAAR+IFRSSS KAATLLSAGARAAPA SPFRIASKRPFSH SFR+PIE+SFCVESMLPFHSATSSALMTSMLSVSPHS+GWLSE +
Subjt:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEVS

XP_004148697.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucumis sativus]2.23e-52100Show/hide
Query:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEVS
        MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEVS
Subjt:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEVS

XP_004148698.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X2 [Cucumis sativus]8.81e-52100Show/hide
Query:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEV
        MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEV
Subjt:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEV

XP_008459321.1 PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucumis melo]2.40e-4791.11Show/hide
Query:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEVS
        MASFAAR+IFRSSS K ATLLSAGARAAPA SPFRIASKRPFSH SFR+PIE+SFCVESMLPFHSATSSALMTSMLSVSPHS+GWLSEVS
Subjt:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEVS

XP_008459322.1 PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucumis melo]9.50e-4791.01Show/hide
Query:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEV
        MASFAAR+IFRSSS K ATLLSAGARAAPA SPFRIASKRPFSH SFR+PIE+SFCVESMLPFHSATSSALMTSMLSVSPHS+GWLSEV
Subjt:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEV

TrEMBL top hitse value%identityAlignment
A0A0A0KVK4 Uncharacterized protein4.27e-52100Show/hide
Query:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEV
        MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEV
Subjt:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEV

A0A1S3C9E2 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X24.60e-4791.01Show/hide
Query:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEV
        MASFAAR+IFRSSS K ATLLSAGARAAPA SPFRIASKRPFSH SFR+PIE+SFCVESMLPFHSATSSALMTSMLSVSPHS+GWLSEV
Subjt:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEV

A0A1S3CB40 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X11.16e-4791.11Show/hide
Query:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEVS
        MASFAAR+IFRSSS K ATLLSAGARAAPA SPFRIASKRPFSH SFR+PIE+SFCVESMLPFHSATSSALMTSMLSVSPHS+GWLSEVS
Subjt:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEVS

A0A5A7TDD1 Protein NUCLEAR FUSION DEFECTIVE 63.55e-4790Show/hide
Query:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEVS
        MASFAAR+IFRSSS KAATLLSAGARAAPA SPFRIASKRPFSH SFR+PIE+SFCVESMLPFHSATSSALMTSMLSVSPHS+GWLSE +
Subjt:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEVS

A0A5D3CTR8 Protein NUCLEAR FUSION DEFECTIVE 66.44e-4792.05Show/hide
Query:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSE
        MASFAAR+IFRSSS KAATLLSAGARAAPA SPFRIASKRPFSH SFR+PIE+SFCVESMLPFHSATSSALMTSMLSVSPHS+GWLSE
Subjt:  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSE

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial4.9e-1147.06Show/hide
Query:  ARSIFRSSSAKAATLLSAGARAAPASSP--FRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSE
        ARS+ R++S+++A   +    +   S+P  FR  ++R       R P+ELSFCVES+LP+HSAT+SALMTS LS+S  ++GWLS+
Subjt:  ARSIFRSSSAKAATLLSAGARAAPASSP--FRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSE

Arabidopsis top hitse value%identityAlignment
AT2G20585.1 nuclear fusion defective 63.4e-1247.06Show/hide
Query:  ARSIFRSSSAKAATLLSAGARAAPASSP--FRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSE
        ARS+ R++S+++A   +    +   S+P  FR  ++R       R P+ELSFCVES+LP+HSAT+SALMTS LS+S  ++GWLS+
Subjt:  ARSIFRSSSAKAATLLSAGARAAPASSP--FRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSE

AT2G20585.2 nuclear fusion defective 63.4e-1247.06Show/hide
Query:  ARSIFRSSSAKAATLLSAGARAAPASSP--FRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSE
        ARS+ R++S+++A   +    +   S+P  FR  ++R       R P+ELSFCVES+LP+HSAT+SALMTS LS+S  ++GWLS+
Subjt:  ARSIFRSSSAKAATLLSAGARAAPASSP--FRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSE

AT2G20585.3 nuclear fusion defective 63.4e-1247.06Show/hide
Query:  ARSIFRSSSAKAATLLSAGARAAPASSP--FRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSE
        ARS+ R++S+++A   +    +   S+P  FR  ++R       R P+ELSFCVES+LP+HSAT+SALMTS LS+S  ++GWLS+
Subjt:  ARSIFRSSSAKAATLLSAGARAAPASSP--FRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSE

AT2G33847.1 unknown protein3.4e-1251.25Show/hide
Query:  AARSIFRSSSAKAATLLSAGARAAPAS--SPFRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHS
        AARS+FRS   +AA       +  P+S  S F++  + P SH  FR P+ELS CVE+MLP+H+AT+SAL+ SMLSVS  S
Subjt:  AARSIFRSSSAKAATLLSAGARAAPAS--SPFRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHS

AT2G33847.2 unknown protein3.4e-1251.25Show/hide
Query:  AARSIFRSSSAKAATLLSAGARAAPAS--SPFRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHS
        AARS+FRS   +AA       +  P+S  S F++  + P SH  FR P+ELS CVE+MLP+H+AT+SAL+ SMLSVS  S
Subjt:  AARSIFRSSSAKAATLLSAGARAAPAS--SPFRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTTTGCCGCCAGGTCCATTTTTCGATCCTCCTCCGCCAAGGCTGCCACTCTTCTCAGCGCCGGAGCCAGAGCTGCTCCGGCTTCTTCACCATTTCGCATTGC
TTCCAAACGACCTTTCTCTCACTGCTCTTTTAGGCTTCCGATTGAACTGAGCTTCTGCGTCGAGTCCATGCTTCCCTTCCATTCTGCAACTTCTTCGGCATTAATGACTT
CGATGCTTTCTGTTTCTCCCCATAGCTTTGGTTGGCTTTCAGAAGTATCTATTTGGCAGTGTCTGGCTTGCAAACTTCATGATATATGA
mRNA sequenceShow/hide mRNA sequence
AAGGAAGAAGAAAGGGAGGAAAAATGAAATCCCCGGTTTTGTGTAGAGCGGCGGCCAAGGTTTAGCATTTCATTGCCCTAAATCGCTCCCTTCTTCCCTTTCTTTCCATT
TACCCATGGCTTCCTTTGCCGCCAGGTCCATTTTTCGATCCTCCTCCGCCAAGGCTGCCACTCTTCTCAGCGCCGGAGCCAGAGCTGCTCCGGCTTCTTCACCATTTCGC
ATTGCTTCCAAACGACCTTTCTCTCACTGCTCTTTTAGGCTTCCGATTGAACTGAGCTTCTGCGTCGAGTCCATGCTTCCCTTCCATTCTGCAACTTCTTCGGCATTAAT
GACTTCGATGCTTTCTGTTTCTCCCCATAGCTTTGGTTGGCTTTCAGAAGTATCTATTTGGCAGTGTCTGGCTTGCAAACTTCATGATATATGATGATGATTGGATAAGG
TTTTGACCACCTGGGCAACAACATATTCTATTCAACCTGACTTGGCGATCTTATATATTGAATTCTGTTTCCTCAGCAAAGCATATGGTTGAGATTTCCCATAGAAACAT
GAGCAACAGTTTTGCTAGGATTGTCCTGTGTTTTAGTGACTTCAAAAATTGTTCTCTCGTGGTTAATTTATGGTTTTAATGATGTTAAAAAAGAAAAGGAAAAGAGTTGA
AGTGGAATGTGAATGAAAAAGAAGATATTAAGGTCGTGTTTATTCCTGGTGAAACATAATCAATCAAAAGTATTCTAAAAGATGCGTCTTATTTCGTTAGATTTGTTTTG
TTACTTATGTTTTGTAATGGTAATGAATTGAAGGAACATAGCTTGCAAATTTGTTATAAAAATGTGTGCAATCTGATTGAAGAAGATAGGGGTGTTTGAAAATGAT
Protein sequenceShow/hide protein sequence
MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEVSIWQCLACKLHDI