; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy6G002380 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy6G002380
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionATP-dependent RNA helicase, putative
Genome locationGy14Chr6:1751625..1753416
RNA-Seq ExpressionCsGy6G002380
SyntenyCsGy6G002380
Gene Ontology termsGO:0003724 - RNA helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR002464 - DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
IPR014001 - Helicase superfamily 1/2, ATP-binding domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646584.1 hypothetical protein Csa_005054 [Cucumis sativus]1.29e-14198.1Show/hide
Query:  SEIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFEDVTSSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADT
        ++IPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFEDVTSSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERT DT
Subjt:  SEIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFEDVTSSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADT

Query:  DVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQGRKLPPLKLIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPIL
        DVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYA SLKRCQGRKLPPLKLIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPIL
Subjt:  DVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQGRKLPPLKLIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPIL

Query:  DYIEGTLITIF
        DYIEGTLITIF
Subjt:  DYIEGTLITIF

XP_008463416.1 PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 [Cucumis melo]3.42e-10468.77Show/hide
Query:  RKRSIAEQRKSLPIAS---------------------------EIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFEDVT
        RKR +AE RKSLP+AS                           +IPQFLFNAGFCR GKAIGVTQPRR+AA++VAKRVAEECGV VG+KVGYSIRFEDVT
Subjt:  RKRSIAEQRKSLPIAS---------------------------EIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFEDVT

Query:  SSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADTDVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQGRKLPPLK
        SSSTRIKYMTDG+LLREALLD YLSRYSVIIVDEAHERT  TDVLLG+LK+VQK RS+SL +S N  N N NGL LE  N+ +Y SSL++ +GRKLPPLK
Subjt:  SSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADTDVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQGRKLPPLK

Query:  LIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPILDYIEGTLITIF
        LIIMSASL+A LFSE+ GGA+ F + GRQYPVAI YTR+ +LDY E TLITIF
Subjt:  LIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPILDYIEGTLITIF

XP_011658383.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 [Cucumis sativus]1.19e-14787.21Show/hide
Query:  GRKRKRSIAEQRKSLPIAS-----------------------------EIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIR
        G+KRKRSIAEQRKSLPIAS                             +IPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIR
Subjt:  GRKRKRSIAEQRKSLPIAS-----------------------------EIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIR

Query:  FEDVTSSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADTDVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQGRK
        FEDVTSSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERT DTDVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYA SLKRCQGRK
Subjt:  FEDVTSSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADTDVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQGRK

Query:  LPPLKLIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPILDYIEGTLITIF
        LPPLKLIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPILDYIEGTLITIF
Subjt:  LPPLKLIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPILDYIEGTLITIF

XP_038904721.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 isoform X1 [Benincasa hispida]2.85e-10669.96Show/hide
Query:  RKRSIAEQRKSLPIAS---------------------------EIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFEDVT
        RKR IAE RKSLP+AS                           +IPQFLFNAGFCR GKAIGVTQPRR+AA++VAKRVAEECGV VG+KVGYSIRFEDVT
Subjt:  RKRSIAEQRKSLPIAS---------------------------EIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFEDVT

Query:  SSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADTDVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQGRKLPPLK
        SSSTRIKYMTDG+LLREALLD YLSRYSVIIVDEAHERT +TDVLLG+LK VQK RS+SL  S N  N N NGL LE+ N+ +Y SSL++ +GRKLPPLK
Subjt:  SSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADTDVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQGRKLPPLK

Query:  LIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPILDYIEGTLITIF
        LIIMSASLNA LFSE+ GGA+ F V GRQYPVAIFYTR+ + DY E TLITIF
Subjt:  LIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPILDYIEGTLITIF

XP_038904722.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 isoform X2 [Benincasa hispida]2.78e-10669.96Show/hide
Query:  RKRSIAEQRKSLPIAS---------------------------EIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFEDVT
        RKR IAE RKSLP+AS                           +IPQFLFNAGFCR GKAIGVTQPRR+AA++VAKRVAEECGV VG+KVGYSIRFEDVT
Subjt:  RKRSIAEQRKSLPIAS---------------------------EIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFEDVT

Query:  SSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADTDVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQGRKLPPLK
        SSSTRIKYMTDG+LLREALLD YLSRYSVIIVDEAHERT +TDVLLG+LK VQK RS+SL  S N  N N NGL LE+ N+ +Y SSL++ +GRKLPPLK
Subjt:  SSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADTDVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQGRKLPPLK

Query:  LIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPILDYIEGTLITIF
        LIIMSASLNA LFSE+ GGA+ F V GRQYPVAIFYTR+ + DY E TLITIF
Subjt:  LIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPILDYIEGTLITIF

TrEMBL top hitse value%identityAlignment
A0A0A0L7N3 Uncharacterized protein6.23e-10268.77Show/hide
Query:  RKRSIAEQRKSLPIAS---------------------------EIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFEDVT
        RKR +AE RKSLP+AS                           +IPQFLFNAGFCR GKAIGVTQPRR+AA++VAKRVAEECGV VG+KVGYSIRFEDVT
Subjt:  RKRSIAEQRKSLPIAS---------------------------EIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFEDVT

Query:  SSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADTDVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQGRKLPPLK
        SSSTRIKYMTDG+LLREALLD YLSRYSVIIVDEAHERT +TDVLLG+LK+VQK RS+SL +S N  N N NG  LE  N+ +Y SSL++ +GRKL PLK
Subjt:  SSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADTDVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQGRKLPPLK

Query:  LIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPILDYIEGTLITIF
        LIIMSASL+A LFSE+ GGAK F V GRQYPVAI YTR+ +LDY E TLITIF
Subjt:  LIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPILDYIEGTLITIF

A0A1S3CJ82 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH101.65e-10468.77Show/hide
Query:  RKRSIAEQRKSLPIAS---------------------------EIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFEDVT
        RKR +AE RKSLP+AS                           +IPQFLFNAGFCR GKAIGVTQPRR+AA++VAKRVAEECGV VG+KVGYSIRFEDVT
Subjt:  RKRSIAEQRKSLPIAS---------------------------EIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFEDVT

Query:  SSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADTDVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQGRKLPPLK
        SSSTRIKYMTDG+LLREALLD YLSRYSVIIVDEAHERT  TDVLLG+LK+VQK RS+SL +S N  N N NGL LE  N+ +Y SSL++ +GRKLPPLK
Subjt:  SSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADTDVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQGRKLPPLK

Query:  LIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPILDYIEGTLITIF
        LIIMSASL+A LFSE+ GGA+ F + GRQYPVAI YTR+ +LDY E TLITIF
Subjt:  LIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPILDYIEGTLITIF

A0A5A7SXH3 Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH101.52e-10168.25Show/hide
Query:  KRSIAEQRKSLPIAS---------------------------EIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFEDVTS
        KR +AE RKSLP+AS                           +IPQFLFNAGFCR GKAIGVTQPRR+AA++VAKRVAEECGV VG+KVGYSIRFEDVTS
Subjt:  KRSIAEQRKSLPIAS---------------------------EIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFEDVTS

Query:  SSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADTDVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQGRKLPPLKL
        SSTRIKYMTDG+LLREALLD YLSRYSVIIVDEAHERT  TDVLLG+LK+VQK RS+SL +S N  N N NGL L+  N+ +Y SSL++ +GRKLPPLKL
Subjt:  SSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADTDVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQGRKLPPLKL

Query:  IIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPILDYIEGTLITIF
        IIMSASL+A LFSE+ GGA+ F + GRQYPVAI YTR+ +LDY E TLITIF
Subjt:  IIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPILDYIEGTLITIF

A0A6J1EVL1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH104.63e-10467.98Show/hide
Query:  RKRSIAEQRKSLPIAS---------------------------EIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFEDVT
        RKR IAE RKSLP+AS                           +IPQFLFNAGFCR GKAIGVTQPRR+AA++VAKRV+EECGV VG+KVGYSIRFEDVT
Subjt:  RKRSIAEQRKSLPIAS---------------------------EIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFEDVT

Query:  SSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADTDVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQGRKLPPLK
        SSSTRIKYMTDG+LLREALLD +LSRYSVIIVDEAHERT +TDVLLG+LK+VQK RS+SL +S N  N + NGL +EN N+ +YASSL++ +GRKLPPLK
Subjt:  SSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADTDVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQGRKLPPLK

Query:  LIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPILDYIEGTLITIF
        LIIMSASL+A LFSE+ GGA+   V GRQ+PVAIFYTR+ + DY+E TLITIF
Subjt:  LIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPILDYIEGTLITIF

A0A6J1JAN7 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH104.00e-10367.32Show/hide
Query:  RKRSIAEQRKSLPIAS---------------------------EIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFEDVT
        RKR IAE RKSLP+AS                           +IPQFLFNAGFCR GKAIGVTQPRR+AA++VAKRV+EECGV VG+KVGYSIRFEDVT
Subjt:  RKRSIAEQRKSLPIAS---------------------------EIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFEDVT

Query:  SSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADTDVLLGYLKRVQKARSKSLTESSNDL----NTNDNGLTLENRNSSEYASSLKRCQGRKL
        SSSTRIKYMTDG+LLREALLD +LSRYSVIIVDEAHERT +TDVLLG+LK+VQK RS+SL +S ND     N + NGL +EN N+ +YASSL++ +GRKL
Subjt:  SSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADTDVLLGYLKRVQKARSKSLTESSNDL----NTNDNGLTLENRNSSEYASSLKRCQGRKL

Query:  PPLKLIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPILDYIEGTLITIF
        PPLKLIIMSASL+A LFSE+ GGA+   V GRQ+PVAIFYTR+ + DY+E TLITIF
Subjt:  PPLKLIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPILDYIEGTLITIF

SwissProt top hitse value%identityAlignment
F4IE66 Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH103.1e-6956.52Show/hide
Query:  KRSIAEQRKSLPIAS---------------------------EIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFEDVTS
        ++ IAE R+SLPIAS                           ++PQFL+NAGFCR GK IG+TQPRRIAA++VAKRVAEEC V +G+KVGYSIRF+D TS
Subjt:  KRSIAEQRKSLPIAS---------------------------EIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFEDVTS

Query:  SSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADTDVLLGYLKRVQKARSKSLTESSNDLN-TNDNGLTLENRNSSEYASSLKRCQGRKLPPLK
         STR+KYMTDG+LLREALLD +LSRYSVIIVDEAH+R+  TDVLL  LK++Q+ RS+ ++E +   N  +    T  + N  +    LK  QGRKL PLK
Subjt:  SSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADTDVLLGYLKRVQKARSKSLTESSNDLN-TNDNGLTLENRNSSEYASSLKRCQGRKLPPLK

Query:  LIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPILDYIEGTLITIF
        LIIMSASL+A +FSE+ GGAK  HV GRQ+PV I YT  P  DY++ TL+TIF
Subjt:  LIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPILDYIEGTLITIF

O42643 Pre-mRNA-splicing factor ATP-dependent RNA helicase prp228.4e-4341.86Show/hide
Query:  IEAGRKRKRSIAEQRKSLPI---------------------------ASEIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSI
        I  G++   S+ EQR+ LP+                            ++I Q+L   G+    K IG TQPRR+AA+SVAKRVAEE G  VGE+VGY+I
Subjt:  IEAGRKRKRSIAEQRKSLPI---------------------------ASEIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSI

Query:  RFEDVTSSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADTDVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQGR
        RFED TS  T+IKYMTDG+L RE L+D  LS+YSVII+DEAHERT  TDVL G LK                                   + LKR    
Subjt:  RFEDVTSSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADTDVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQGR

Query:  KLPPLKLIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPILDYIEGTLITI
          P LKLI+ SA+L+A  FS +     +F + GR YPV I YT+QP  DY++  L+T+
Subjt:  KLPPLKLIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPILDYIEGTLITI

O45244 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-47.6e-4439.62Show/hide
Query:  VIIEAGRKRKRSIAEQRKSLPI---------------------------ASEIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGY
        V+     K+K SI E RKSLP+                            +++PQ+L+ AGFC  GK IG TQPRR+AA+SVA RVA+E G  +G +VGY
Subjt:  VIIEAGRKRKRSIAEQRKSLPI---------------------------ASEIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGY

Query:  SIRFEDVTSSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADTDVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQ
        SIRFED TS  T +KYMTDG+LLRE L +  L+ YSV+++DEAHERT  TD+L G +K + + R                                    
Subjt:  SIRFEDVTSSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADTDVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQ

Query:  GRKLPPLKLIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPILDYIEGTLITI
              LKL+I SA+L+A  FS F   A +F + GR++PV I+YT+ P  DY++  ++TI
Subjt:  GRKLPPLKLIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPILDYIEGTLITI

Q03319 Probable ATP-dependent RNA helicase prh14.9e-4340.7Show/hide
Query:  EAGRKRKRSIAEQRKSLPI---------------------------ASEIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIR
        E    +++ I EQRK+LPI                           +++IPQFL    + + G  + +TQPRR+AA+++AKRVA E G  +GE+VGYSIR
Subjt:  EAGRKRKRSIAEQRKSLPI---------------------------ASEIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIR

Query:  FEDVTSSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADTDVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQGRK
        F+D TS  TRIKY+TDG+LLRE + D  LS+Y  +I+DEAHERT  TD+LLG++K++ K R                                       
Subjt:  FEDVTSSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADTDVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQGRK

Query:  LPPLKLIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPILDYIEGTLITIF
         P L++IIMSA+LNA  FSEF  GA++ ++ GRQYPV I YT  P  DY++  L TIF
Subjt:  LPPLKLIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPILDYIEGTLITIF

Q9H6R0 ATP-dependent RNA helicase DHX338.4e-4344.08Show/hide
Query:  SEIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFEDVTSSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADT
        ++IPQ+L+  G  R G  I VTQPRR+AA+S+A RV++E    +G+ VGY++RF+DVTS  TRIK++TDG+LLREA+ DS L +YS +I+DEAHERT  T
Subjt:  SEIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFEDVTSSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADT

Query:  DVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQGRKLPPLKLIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPIL
        DVL G +K  QK R +                                    KL PLK+I+MSA+++  LFS++  GA V ++ GRQ+P+ +FYT+QP  
Subjt:  DVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQGRKLPPLKLIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPIL

Query:  DYIEGTLITIF
        DY+   L+++F
Subjt:  DYIEGTLITIF

Arabidopsis top hitse value%identityAlignment
AT1G26370.1 RNA helicase family protein2.2e-7056.52Show/hide
Query:  KRSIAEQRKSLPIAS---------------------------EIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFEDVTS
        ++ IAE R+SLPIAS                           ++PQFL+NAGFCR GK IG+TQPRRIAA++VAKRVAEEC V +G+KVGYSIRF+D TS
Subjt:  KRSIAEQRKSLPIAS---------------------------EIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFEDVTS

Query:  SSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADTDVLLGYLKRVQKARSKSLTESSNDLN-TNDNGLTLENRNSSEYASSLKRCQGRKLPPLK
         STR+KYMTDG+LLREALLD +LSRYSVIIVDEAH+R+  TDVLL  LK++Q+ RS+ ++E +   N  +    T  + N  +    LK  QGRKL PLK
Subjt:  SSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADTDVLLGYLKRVQKARSKSLTESSNDLN-TNDNGLTLENRNSSEYASSLKRCQGRKLPPLK

Query:  LIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPILDYIEGTLITIF
        LIIMSASL+A +FSE+ GGAK  HV GRQ+PV I YT  P  DY++ TL+TIF
Subjt:  LIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPILDYIEGTLITIF

AT1G32490.1 RNA helicase family protein1.2e-4144.29Show/hide
Query:  SEIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFEDVTSSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADT
        ++IPQ+L  AG+ + GK +G TQPRR+AA+SVA RVA+E GV +G +VGYSIRFED TS  T +KYMTDG+LLRE L +  L+ YSV+IVDEAHERT  T
Subjt:  SEIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFEDVTSSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADT

Query:  DVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQGRKLPPLKLIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPIL
        D+L G +K + + R                                        P LKL+I SA+++A  FS++   A +F   GR+YPV I YT  P  
Subjt:  DVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQGRKLPPLKLIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPIL

Query:  DYIEGTLITI
        DY++  ++TI
Subjt:  DYIEGTLITI

AT1G32490.2 RNA helicase family protein1.2e-4144.29Show/hide
Query:  SEIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFEDVTSSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADT
        ++IPQ+L  AG+ + GK +G TQPRR+AA+SVA RVA+E GV +G +VGYSIRFED TS  T +KYMTDG+LLRE L +  L+ YSV+IVDEAHERT  T
Subjt:  SEIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFEDVTSSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADT

Query:  DVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQGRKLPPLKLIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPIL
        D+L G +K + + R                                        P LKL+I SA+++A  FS++   A +F   GR+YPV I YT  P  
Subjt:  DVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQGRKLPPLKLIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPIL

Query:  DYIEGTLITI
        DY++  ++TI
Subjt:  DYIEGTLITI

AT2G47250.1 RNA helicase family protein9.6e-4245.12Show/hide
Query:  SEIPQFLFNAGFCRHGK-----AIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFEDVTSSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHE
        ++IPQF+ +A    +        +G TQPRR+AA+SV++RVA+E  V +GE+VGYSIRFED TSS T +KY+TDG+LLREA+ D  L RY VII+DEAHE
Subjt:  SEIPQFLFNAGFCRHGK-----AIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFEDVTSSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHE

Query:  RTADTDVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQGRKLPPLKLIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYT
        RT  TDVL G LK V                       L NR                 P LKL++MSA+L A  F E+  GA +  V GR +PV IFYT
Subjt:  RTADTDVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQGRKLPPLKLIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYT

Query:  RQPILDYIEGTLITI
        ++P  DY+E  + T+
Subjt:  RQPILDYIEGTLITI

AT3G26560.1 ATP-dependent RNA helicase, putative7.8e-4441.96Show/hide
Query:  GRKRKRSIAEQRKSLPI---------------------------ASEIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFE
        G++ K SI EQR+SLPI                            +++ Q+L  AG+   GK IG TQPRR+AA+SVAKRVAEE G  +GE+VGY+IRFE
Subjt:  GRKRKRSIAEQRKSLPI---------------------------ASEIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFE

Query:  DVTSSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADTDVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQGRKLP
        D T   T IKYMTDG+LLRE L+D  LS+YSVI++DEAHERT  TDVL G LK++ K R                                         
Subjt:  DVTSSSTRIKYMTDGILLREALLDSYLSRYSVIIVDEAHERTADTDVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQGRKLP

Query:  PLKLIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPILDYIEGTLITI
         L+LI+ SA+L+A  FS +     +F + GR +PV I YT+QP  DY++  LIT+
Subjt:  PLKLIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTRQPILDYIEGTLITI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAATAATAGAAGCTGGAAGAAAGCGAAAGCGATCAATTGCAGAACAGAGAAAATCACTCCCAATAGCATCTGAGATACCACAGTTCCTCTTTAATGCTGGGTTTTG
TCGACATGGAAAAGCTATTGGGGTAACCCAACCTCGACGAATTGCTGCCCTATCTGTAGCCAAACGAGTTGCTGAGGAATGTGGTGTCGTAGTTGGTGAAAAGGTTGGGT
ATTCTATCAGATTCGAGGATGTAACTTCCAGTTCCACCAGAATAAAGTATATGACAGATGGTATACTACTGAGGGAAGCACTGTTAGATTCTTATCTTTCTAGATATTCA
GTTATTATTGTTGATGAAGCTCATGAAAGAACTGCTGATACTGATGTATTGCTAGGGTATTTGAAAAGAGTGCAGAAAGCAAGATCTAAATCTTTAACTGAATCTTCTAA
TGATCTGAACACAAATGATAATGGCTTGACGTTAGAAAATAGAAATAGCAGTGAATATGCCTCTTCCTTAAAGAGATGTCAAGGAAGGAAACTACCTCCCCTGAAGTTAA
TTATCATGTCAGCCAGCTTAAATGCACCCCTTTTCTCTGAGTTTTCTGGTGGAGCAAAGGTGTTCCATGTCCATGGGCGTCAGTATCCTGTAGCTATATTTTATACCCGC
CAGCCCATACTAGATTACATAGAGGGTACTCTTATTACTATATTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAATAATAGAAGCTGGAAGAAAGCGAAAGCGATCAATTGCAGAACAGAGAAAATCACTCCCAATAGCATCTGAGATACCACAGTTCCTCTTTAATGCTGGGTTTTG
TCGACATGGAAAAGCTATTGGGGTAACCCAACCTCGACGAATTGCTGCCCTATCTGTAGCCAAACGAGTTGCTGAGGAATGTGGTGTCGTAGTTGGTGAAAAGGTTGGGT
ATTCTATCAGATTCGAGGATGTAACTTCCAGTTCCACCAGAATAAAGTATATGACAGATGGTATACTACTGAGGGAAGCACTGTTAGATTCTTATCTTTCTAGATATTCA
GTTATTATTGTTGATGAAGCTCATGAAAGAACTGCTGATACTGATGTATTGCTAGGGTATTTGAAAAGAGTGCAGAAAGCAAGATCTAAATCTTTAACTGAATCTTCTAA
TGATCTGAACACAAATGATAATGGCTTGACGTTAGAAAATAGAAATAGCAGTGAATATGCCTCTTCCTTAAAGAGATGTCAAGGAAGGAAACTACCTCCCCTGAAGTTAA
TTATCATGTCAGCCAGCTTAAATGCACCCCTTTTCTCTGAGTTTTCTGGTGGAGCAAAGGTGTTCCATGTCCATGGGCGTCAGTATCCTGTAGCTATATTTTATACCCGC
CAGCCCATACTAGATTACATAGAGGGTACTCTTATTACTATATTTTAG
Protein sequenceShow/hide protein sequence
MVIIEAGRKRKRSIAEQRKSLPIASEIPQFLFNAGFCRHGKAIGVTQPRRIAALSVAKRVAEECGVVVGEKVGYSIRFEDVTSSSTRIKYMTDGILLREALLDSYLSRYS
VIIVDEAHERTADTDVLLGYLKRVQKARSKSLTESSNDLNTNDNGLTLENRNSSEYASSLKRCQGRKLPPLKLIIMSASLNAPLFSEFSGGAKVFHVHGRQYPVAIFYTR
QPILDYIEGTLITIF