CuGenDBv2

Gene ID	CsGy6G002680
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic
Genome location	Gy14Chr6:2037191..2037537
RNA-Seq Expression	CsGy6G002680
Synteny	CsGy6G002680
Gene Ontology terms	GO:0006633 - fatty acid biosynthetic process (biological process) GO:2001295 - malonyl-CoA biosynthetic process (biological process) GO:0009317 - acetyl-CoA carboxylase complex (cellular component) GO:0009570 - chloroplast stroma (cellular component) GO:0003989 - acetyl-CoA carboxylase activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0016743 - carboxyl- or carbamoyltransferase activity (molecular function)
InterPro domains	IPR011762 - Acetyl-coenzyme A carboxyltransferase, N-terminal IPR029045 - ClpP/crotonase-like domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AAZ94660.1 acetyl-CoA carboxylase beta subunit [Cucumis sativus]

3.71e-43

78.64

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Query:  MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPI------------------EGDSEEYKDSSYKDRISSSQIETGLPEAIQTS
        MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPI                  EGDSEEYKDSSYKDRISSSQIETGLPEAIQT 
Subjt:  MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPI------------------EGDSEEYKDSSYKDRISSSQIETGLPEAIQTS

Query:  YAR
          +
Subjt:  YAR

MBC9853675.1 hypothetical protein [Adiantum capillus-veneris]

4.63e-43

78.64

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Query:  MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPI------------------EGDSEEYKDSSYKDRISSSQIETGLPEAIQTS
        MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPI                  EGDSEEYKDSSYKDRISSSQIETGLPEAIQT 
Subjt:  MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPI------------------EGDSEEYKDSSYKDRISSSQIETGLPEAIQTS

Query:  YAR
          +
Subjt:  YAR

QCY72851.1 AccD [Cucumis hystrix]

1.39e-41

76.7

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Query:  MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPI------------------EGDSEEYKDSSYKDRISSSQIETGLPEAIQTS
        MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPI+WDSEVDPI                  EGDSEEYKDSSYKDRISSSQIETGL EAIQT 
Subjt:  MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPI------------------EGDSEEYKDSSYKDRISSSQIETGLPEAIQTS

Query:  YAR
          +
Subjt:  YAR

YP_009004053.1 Acetyl-CoA carboxylase carboxyltransferase beta subunit [Cucumis hystrix]

3.71e-43

78.64

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Query:  MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPI------------------EGDSEEYKDSSYKDRISSSQIETGLPEAIQTS
        MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPI                  EGDSEEYKDSSYKDRISSSQIETGLPEAIQT 
Subjt:  MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPI------------------EGDSEEYKDSSYKDRISSSQIETGLPEAIQTS

Query:  YAR
          +
Subjt:  YAR

YP_009346493.1 acetyl-CoA carboxylase carboxyltransferase beta subunit [Cucumis x hytivus]

2.04e-41

76.7

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Query:  MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPI------------------EGDSEEYKDSSYKDRISSSQIETGLPEAIQTS
        MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPI+WDSEVDPI                  EGDSEEYKDSSYKDRISSSQIETGL EAIQT 
Subjt:  MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPI------------------EGDSEEYKDSSYKDRISSSQIETGLPEAIQTS

Query:  YAR
          +
Subjt:  YAR

TrEMBL top hits

e value

%identity

Alignment

A0A1X9Q1V0 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

1.80e-43

78.64

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Query:  MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPI------------------EGDSEEYKDSSYKDRISSSQIETGLPEAIQTS
        MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPI                  EGDSEEYKDSSYKDRISSSQIETGLPEAIQT 
Subjt:  MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPI------------------EGDSEEYKDSSYKDRISSSQIETGLPEAIQTS

Query:  YAR
          +
Subjt:  YAR

A0A218KG54 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

1.80e-43

78.64

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Query:  MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPI------------------EGDSEEYKDSSYKDRISSSQIETGLPEAIQTS
        MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPI                  EGDSEEYKDSSYKDRISSSQIETGLPEAIQT 
Subjt:  MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPI------------------EGDSEEYKDSSYKDRISSSQIETGLPEAIQTS

Query:  YAR
          +
Subjt:  YAR

A0A343UM41 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

1.80e-43

78.64

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Query:  MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPI------------------EGDSEEYKDSSYKDRISSSQIETGLPEAIQTS
        MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPI                  EGDSEEYKDSSYKDRISSSQIETGLPEAIQT 
Subjt:  MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPI------------------EGDSEEYKDSSYKDRISSSQIETGLPEAIQTS

Query:  YAR
          +
Subjt:  YAR

A0A4Y5RCV8 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

6.72e-42

76.7

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Query:  MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPI------------------EGDSEEYKDSSYKDRISSSQIETGLPEAIQTS
        MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPI+WDSEVDPI                  EGDSEEYKDSSYKDRISSSQIETGL EAIQT 
Subjt:  MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPI------------------EGDSEEYKDSSYKDRISSSQIETGLPEAIQTS

Query:  YAR
          +
Subjt:  YAR

W8E133 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta

1.80e-43

78.64

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Query:  MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPI------------------EGDSEEYKDSSYKDRISSSQIETGLPEAIQTS
        MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPI                  EGDSEEYKDSSYKDRISSSQIETGLPEAIQT 
Subjt:  MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPI------------------EGDSEEYKDSSYKDRISSSQIETGLPEAIQTS

Query:  YAR
          +
Subjt:  YAR

SwissProt top hits

e value

%identity

Alignment

A1XFW4 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

1.5e-24

64.71

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Query:  MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPIEGDSEEYKDSSYKDRISSSQIETGLPEAIQTSYAR
        MNICE+CGYHLKM+SSDRIELLIDPGTW+PMDE+MVS+DPIE+ SE +P            Y+DRI+S QIETGL EA+QT   +
Subjt:  MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPIEGDSEEYKDSSYKDRISSSQIETGLPEAIQTSYAR

Q2QD80 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

9.3e-38

81.82

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Query:  MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDP------------------IEGDSEEYKDSSYKDRISSSQIETGLPEAIQT
        MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDP                  IEGDSEEYKDSSYKDRISSSQIETGLPEAIQT
Subjt:  MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDP------------------IEGDSEEYKDSSYKDRISSSQIETGLPEAIQT

Q3BAN3 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

2.6e-24

72.84

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Query:  MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPIEGDSEEYKDSSYKDRISSSQIETGLPEAIQT
        MNICE CGYHLKM+SSDRIEL IDPGTWEPMDEDMVS+DPIE+ S +DPIE  SEE     Y DRIS  Q +TGL EA+QT
Subjt:  MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPIEGDSEEYKDSSYKDRISSSQIETGLPEAIQT

Q3C1J3 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

9.9e-24

67.9

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Query:  MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPIEGDSEEYKDSSYKDRISSSQIETGLPEAIQT
        MNICE+CGYHLKM+SSDRIELLIDPGTW+PMDEDMVS+DPIE+ SE +P            YKDRI S Q +TGL EA+QT
Subjt:  MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPIEGDSEEYKDSSYKDRISSSQIETGLPEAIQT

Q6EW70 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

9.0e-25

65.88

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Query:  MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPIEGDSEEYKDSSYKDRISSSQIETGLPEAIQTSYAR
        MNICE+CGYHLKM+SSDRIELLIDPGTW+PMDE+MVS+DPIE+ SE DP            Y+DRI+S QIETGL EA+QT   +
Subjt:  MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPIEGDSEEYKDSSYKDRISSSQIETGLPEAIQTSYAR

Arabidopsis top hits

e value

%identity

Alignment

ATCG00500.1 acetyl-CoA carboxylase carboxyl transferase subunit beta

3.1e-20

56.79

Show/hide

Query:  MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPIEGDSEEYKDSSYKDRISSSQIETGLPEAIQT
        MN+CE+CG++LKM+SS+RIEL IDPGTW PMDEDMVS DPI++ S+ +P            YK+RI S+Q  TGL +A+QT
Subjt:  MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPIEGDSEEYKDSSYKDRISSSQIETGLPEAIQT

Sequences

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CDS sequence

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ATGAATATTTGTGAAGAATGTGGATACCATTTGAAAATGAATAGTTCAGATAGAATCGAACTTTTGATTGATCCAGGTACTTGGGAGCCTATGGATGAAGACATGGTCTC
TGTGGATCCCATTGAATGGGATTCGGAGGTGGATCCCATTGAAGGGGATTCGGAGGAGTACAAGGACTCTTCTTATAAAGATCGTATTTCTTCTTCTCAAATAGAGACAG
GATTACCTGAGGCTATTCAAACAAGCTATGCTAGGCGGCCAAGAACGTCTTGTTAG

mRNA sequence

Show/hide mRNA sequence

ACTACAACCATTTTTGGGTTATATGCGAAAATTGTCATAAATTCAATTATAAGAGACTTTTCAAATCAAAAATGAATATTTGTGAAGAATGTGGATACCATTTGAAAATG
AATAGTTCAGATAGAATCGAACTTTTGATTGATCCAGGTACTTGGGAGCCTATGGATGAAGACATGGTCTCTGTGGATCCCATTGAATGGGATTCGGAGGTGGATCCCAT
TGAAGGGGATTCGGAGGAGTACAAGGACTCTTCTTATAAAGATCGTATTTCTTCTTCTCAAATAGAGACAGGATTACCTGAGGCTATTCAAACAAGCTATGCTAGGCGGC
CAAGAACGTCTTGTTAG

Protein sequence

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MNICEECGYHLKMNSSDRIELLIDPGTWEPMDEDMVSVDPIEWDSEVDPIEGDSEEYKDSSYKDRISSSQIETGLPEAIQTSYARRPRTSC

CsGy6G002680 (gene) of Cucumber (Gy14) v2.1 genome