; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy6G002885 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy6G002885
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptiontranscription factor IBH1
Genome locationGy14Chr6:2203813..2204745
RNA-Seq ExpressionCsGy6G002885
SyntenyCsGy6G002885
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR036638 - Helix-loop-helix DNA-binding domain superfamily
IPR044549 - Transcription factor IBH1-like, bHLH domain
IPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646599.1 hypothetical protein Csa_005327 [Cucumis sativus]2.06e-5498.95Show/hide
Query:  MAAYSSMARVAGRRRAWARALLFRLHTRRRHKTLMRRKRRPSTSSDDMVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISNHHLSK
        MAAYSSMARVAGRRRAWARALLFRLHTR RHKTLMRRKRRPSTSSDDMVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISNHHLSK
Subjt:  MAAYSSMARVAGRRRAWARALLFRLHTRRRHKTLMRRKRRPSTSSDDMVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISNHHLSK

KAG6575326.1 Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. sororia]2.22e-4867.12Show/hide
Query:  SKSAITLLNSTSSRLCFARTFLRLFSRIKSQRSATFSSAPPDQLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTRRRHKTLMRRKRRPSTSSDDM
        SKS  T + STSS L  ARTFLR F+ IKSQ  A   S  P +L+R+SRRIKM AYSSMAR AG R AWARALLF+L TR RH+TL+ R RR    SDD 
Subjt:  SKSAITLLNSTSSRLCFARTFLRLFSRIKSQRSATFSSAPPDQLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTRRRHKTLMRRKRRPSTSSDDM

Query:  VGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISNHHLS
        VGKLRRL+PGGE+MDVCTLLEET  YI CLS QVKVMKAI +H  S
Subjt:  VGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISNHHLS

KAG7025295.1 Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. argyrosperma]6.00e-5470.27Show/hide
Query:  SKSAITLLNSTSSRLCFARTFLRLFSRIKSQRSATFSSAPPDQLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTRRRHKTLMRRKRR--PSTSSD
        S+S  T +NS+SS L  ARTFLR FSRIKS+R  T +S    +L+R+SRRIK+AAYSSMARVAG +RAWARALLF+L+TR RH TLMRR+R   PS   D
Subjt:  SKSAITLLNSTSSRLCFARTFLRLFSRIKSQRSATFSSAPPDQLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTRRRHKTLMRRKRR--PSTSSD

Query:  DMVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISNHHLS
        D VGKLRRLLPGG+ MDVCTLLEETA+YIHCLS QVKVM AI+ HHLS
Subjt:  DMVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISNHHLS

XP_008464343.1 PREDICTED: transcription factor IBH1 [Cucumis melo]5.98e-8288.82Show/hide
Query:  MANSKSAITLLNSTSSRLCFARTFLRLFSRIKSQRSATFSSAPPDQLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTRRRHKTLMRRKRRPSTSS
        M NSKSAITLLNSTSSR  FARTFLRLFSRIKSQRSATF+SAPPDQLKRQS+RIKM AYSSMARVAG RRAWARALLF+L TR RH+TLMRRKRRPSTS 
Subjt:  MANSKSAITLLNSTSSRLCFARTFLRLFSRIKSQRSATFSSAPPDQLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTRRRHKTLMRRKRRPSTSS

Query:  DDMVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISNHHLSKVN
        DD VGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAIS+ HLS  N
Subjt:  DDMVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISNHHLSKVN

XP_023005092.1 transcription factor IBH1 [Cucurbita maxima]9.87e-5368.24Show/hide
Query:  KSAITLLNSTSSRLCFARTFLRLFSRIKSQRSATFSSAPPDQLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTRRRHKTLMRRK--RRPSTSSDD
        +S IT +NS+SS L  ARTFLR FSRIKS+R  T +S    +L+R+SRRIK+AAYSSMARVAG +R WARALLF+L+TR RH+T MRR+    PS   DD
Subjt:  KSAITLLNSTSSRLCFARTFLRLFSRIKSQRSATFSSAPPDQLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTRRRHKTLMRRK--RRPSTSSDD

Query:  MVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISNHHLSK
         VGKLRRL+PGG+ MDVCTLLEETA+YIHCLS QVKVM AI+ HHLSK
Subjt:  MVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISNHHLSK

TrEMBL top hitse value%identityAlignment
A0A0A0KDQ3 Uncharacterized protein1.17e-8390.79Show/hide
Query:  MANSKSAITLLNSTSSRLCFARTFLRLFSRIKSQRSATFSSAPPDQLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTRRRHKTLMRRKRRPSTSS
        MANSKSAITLLNSTSSRLCFART            SATF+SAPPDQLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTR RHKTLMRRKRRPSTSS
Subjt:  MANSKSAITLLNSTSSRLCFARTFLRLFSRIKSQRSATFSSAPPDQLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTRRRHKTLMRRKRRPSTSS

Query:  DDMVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISNHHLSKVN
        DDMVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISNHHLSKVN
Subjt:  DDMVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISNHHLSKVN

A0A1S3CLD3 transcription factor IBH12.90e-8288.82Show/hide
Query:  MANSKSAITLLNSTSSRLCFARTFLRLFSRIKSQRSATFSSAPPDQLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTRRRHKTLMRRKRRPSTSS
        M NSKSAITLLNSTSSR  FARTFLRLFSRIKSQRSATF+SAPPDQLKRQS+RIKM AYSSMARVAG RRAWARALLF+L TR RH+TLMRRKRRPSTS 
Subjt:  MANSKSAITLLNSTSSRLCFARTFLRLFSRIKSQRSATFSSAPPDQLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTRRRHKTLMRRKRRPSTSS

Query:  DDMVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISNHHLSKVN
        DD VGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAIS+ HLS  N
Subjt:  DDMVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISNHHLSKVN

A0A2N9I4P0 Uncharacterized protein1.27e-3147.62Show/hide
Query:  LNSTSSRLCFARTFLRLFSRIKSQRSATFSSAPPDQLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTRRRHKTLMRRKR-----RPSTSSDDMVG
        LN+ S R+ FAR F+R  S++K       SS+  D+++++S+RIK+AAYSSMA   G ++AW+RA+LF+L  R RH+ +M R+R     +     +D  G
Subjt:  LNSTSSRLCFARTFLRLFSRIKSQRSATFSSAPPDQLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTRRRHKTLMRRKR-----RPSTSSDDMVG

Query:  ------KLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISNH
              KLR+L+PGG+ MD+C+LLEETA+YI CLSTQVKVM+ I++H
Subjt:  ------KLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISNH

A0A5D3BPL2 Transcription factor IBH12.90e-8288.82Show/hide
Query:  MANSKSAITLLNSTSSRLCFARTFLRLFSRIKSQRSATFSSAPPDQLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTRRRHKTLMRRKRRPSTSS
        M NSKSAITLLNSTSSR  FARTFLRLFSRIKSQRSATF+SAPPDQLKRQS+RIKM AYSSMARVAG RRAWARALLF+L TR RH+TLMRRKRRPSTS 
Subjt:  MANSKSAITLLNSTSSRLCFARTFLRLFSRIKSQRSATFSSAPPDQLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTRRRHKTLMRRKRRPSTSS

Query:  DDMVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISNHHLSKVN
        DD VGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAIS+ HLS  N
Subjt:  DDMVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISNHHLSKVN

A0A6J1KS83 transcription factor IBH14.78e-5368.24Show/hide
Query:  KSAITLLNSTSSRLCFARTFLRLFSRIKSQRSATFSSAPPDQLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTRRRHKTLMRRK--RRPSTSSDD
        +S IT +NS+SS L  ARTFLR FSRIKS+R  T +S    +L+R+SRRIK+AAYSSMARVAG +R WARALLF+L+TR RH+T MRR+    PS   DD
Subjt:  KSAITLLNSTSSRLCFARTFLRLFSRIKSQRSATFSSAPPDQLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTRRRHKTLMRRK--RRPSTSSDD

Query:  MVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISNHHLSK
         VGKLRRL+PGG+ MDVCTLLEETA+YIHCLS QVKVM AI+ HHLSK
Subjt:  MVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISNHHLSK

SwissProt top hitse value%identityAlignment
Q01I07 Transcription factor IBH18.8e-0936.48Show/hide
Query:  FLRLFSRIKSQRSATFSSAPPDQLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTRRRHKTLMRR-----KRR------PSTSS------------
        FLR  SRI      T          R++R I+ AAYSSMAR A  RRAW+RALL +    RR +TLMRR     +RR      PS +S            
Subjt:  FLRLFSRIKSQRSATFSSAPPDQLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTRRRHKTLMRR-----KRR------PSTSS------------

Query:  ----------------DDMVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAI
                              LRRL+PGG  M+  +LLEETA+Y+  L  QV++M+ +
Subjt:  ----------------DDMVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAI

Q7XR02 Transcription factor IBH16.7e-0936.48Show/hide
Query:  FLRLFSRIKSQRSATFSSAPPDQLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTRRRHKTLMRR-----KRR------PSTSS------------
        FLR  SRI      T          R++R I+ AAYSSMAR A  RRAW+RALL ++   RR +TLMRR     +RR      PS +S            
Subjt:  FLRLFSRIKSQRSATFSSAPPDQLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTRRRHKTLMRR-----KRR------PSTSS------------

Query:  ----------------DDMVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAI
                              LRRL+PGG  M+  +LLEETA+Y+  L  QV++M+ +
Subjt:  ----------------DDMVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAI

Q9SKX1 Transcription factor IBH17.2e-1139.07Show/hide
Query:  SAITLLNS-TSSRLCFARTFLRLFSRIKSQRSATFSSAPPDQLKRQSRRIKMAAYSSMARVA-GRRRAWARALLFRL---------HTRRRHKTLMRRKR
        SA  L+N+    +  FA  FL+  S ++ Q         PDQ   + R+IK AAY SMAR A G  R W+RALL R           +RR+ K   +R+R
Subjt:  SAITLLNS-TSSRLCFARTFLRLFSRIKSQRSATFSSAPPDQLKRQSRRIKMAAYSSMARVA-GRRRAWARALLFRL---------HTRRRHKTLMRRKR

Query:  RPSTSS--DDMVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAI
            +   ++   +LR L+PGG  M+   L+EETA+YI CLS QVKVM+ +
Subjt:  RPSTSS--DDMVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAI

Arabidopsis top hitse value%identityAlignment
AT2G43060.1 ILI1 binding bHLH 15.1e-1239.07Show/hide
Query:  SAITLLNS-TSSRLCFARTFLRLFSRIKSQRSATFSSAPPDQLKRQSRRIKMAAYSSMARVA-GRRRAWARALLFRL---------HTRRRHKTLMRRKR
        SA  L+N+    +  FA  FL+  S ++ Q         PDQ   + R+IK AAY SMAR A G  R W+RALL R           +RR+ K   +R+R
Subjt:  SAITLLNS-TSSRLCFARTFLRLFSRIKSQRSATFSSAPPDQLKRQSRRIKMAAYSSMARVA-GRRRAWARALLFRL---------HTRRRHKTLMRRKR

Query:  RPSTSS--DDMVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAI
            +   ++   +LR L+PGG  M+   L+EETA+YI CLS QVKVM+ +
Subjt:  RPSTSS--DDMVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAATTCTAAATCAGCTATAACCCTATTGAATTCCACTTCATCCCGACTCTGTTTCGCTCGAACGTTCCTTCGATTGTTCTCCCGAATCAAATCCCAAAGATCCGC
CACCTTTTCCTCCGCTCCTCCAGATCAGCTAAAACGCCAGAGTCGACGGATAAAAATGGCTGCATACTCTTCCATGGCTCGGGTTGCAGGGCGAAGGCGAGCTTGGGCTA
GAGCCCTTCTCTTCAGGCTCCATACGCGACGCAGACACAAGACTCTAATGAGGAGAAAAAGAAGACCCTCGACTAGCTCTGATGACATGGTGGGTAAGCTCCGACGCCTG
CTCCCCGGTGGTGAGACCATGGACGTGTGCACGTTGTTGGAGGAAACTGCGAATTACATCCATTGCTTGTCCACGCAGGTTAAGGTGATGAAAGCCATATCTAATCATCA
CTTGTCAAAGGTCAATTGA
mRNA sequenceShow/hide mRNA sequence
CTTGATTCCTTCCCCTATATGCTTCTTCCTGAGTTGTTTCCACTTTAGAGAGAGAAATTCTGTGTTTTCTTAAGCTTTGATGGTGTTTGTGTAAATCAATCAAGTTATTA
TACTTTGTGCTTCAACTCAAGATGTTGCCTTAATTTTGTCCATAATTTCAAGCTAAGAGGCCCCTCTGTGTCAGTCCCAAATCAGAAAATCTCAACTTGATCCAAACCTT
CATTCTTCCCTTTGTCTCTCTCTCTCTTTCAAAAGATATGTTGTGTCAGAGTTAGCTGTACAAGGAATTCAAGATCCTTCTCTCTCTCTAAATATTATTATAAATCTTTC
CCTCTTCATTTTATCCATGGCTAATTCTAAATCAGCTATAACCCTATTGAATTCCACTTCATCCCGACTCTGTTTCGCTCGAACGTTCCTTCGATTGTTCTCCCGAATCA
AATCCCAAAGATCCGCCACCTTTTCCTCCGCTCCTCCAGATCAGCTAAAACGCCAGAGTCGACGGATAAAAATGGCTGCATACTCTTCCATGGCTCGGGTTGCAGGGCGA
AGGCGAGCTTGGGCTAGAGCCCTTCTCTTCAGGCTCCATACGCGACGCAGACACAAGACTCTAATGAGGAGAAAAAGAAGACCCTCGACTAGCTCTGATGACATGGTGGG
TAAGCTCCGACGCCTGCTCCCCGGTGGTGAGACCATGGACGTGTGCACGTTGTTGGAGGAAACTGCGAATTACATCCATTGCTTGTCCACGCAGGTTAAGGTGATGAAAG
CCATATCTAATCATCACTTGTCAAAGGTCAATTGATCCAAATCTTCTTAAGAAATTCCTCATTATTAACACAGATCATGATAATATATATATATATATATATATATACAT
CCAAACACAGCTTAATTAAATTATACACAACATACAGCAAAAGTAGAAAAGAG
Protein sequenceShow/hide protein sequence
MANSKSAITLLNSTSSRLCFARTFLRLFSRIKSQRSATFSSAPPDQLKRQSRRIKMAAYSSMARVAGRRRAWARALLFRLHTRRRHKTLMRRKRRPSTSSDDMVGKLRRL
LPGGETMDVCTLLEETANYIHCLSTQVKVMKAISNHHLSKVN