CuGenDBv2

Gene ID	CsGy6G002910
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	protein PRD1
Genome location	Gy14Chr6:2253748..2255187
RNA-Seq Expression	CsGy6G002910
Synteny	CsGy6G002910
Gene Ontology terms	GO:0042138 - meiotic DNA double-strand break formation (biological process)
InterPro domains	IPR011989 - Armadillo-like helical IPR016024 - Armadillo-type fold IPR044968 - Protein PUTATIVE RECOMBINATION INITIATION DEFECT 1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008464335.1 PREDICTED: protein PRD1 isoform X1 [Cucumis melo]

2.40e-216

95.81

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Query:  MSYDGHPDDQSIPPSSCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQPTFLRTFLTFHSHFIVAPFVAALCSFDDHSIAR
        MSYDGHPDDQSIPP+SCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQP  LRTFLTFHSHFIVAPFVAALCSFDDHSIAR
Subjt:  MSYDGHPDDQSIPPSSCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQPTFLRTFLTFHSHFIVAPFVAALCSFDDHSIAR

Query:  QLTDLVRRLCDVTEVDGYGSLCDDFIARFSDRISSGSLAWSRRQVYMLHCYGMLLNYRTKNFHGQIKNNDVIVSNLVAGLELPSEEIRGEILFVLYKLSV
        QLTDLVR LCDVTEVDG+GSLCDDFIARFSDR+SSGSLAWSRRQVY+LHCYGMLLNYRTKNFHG+IKNN+ IVSNLVAGLELPSEEIRGEILFVLYKLSV
Subjt:  QLTDLVRRLCDVTEVDGYGSLCDDFIARFSDRISSGSLAWSRRQVYMLHCYGMLLNYRTKNFHGQIKNNDVIVSNLVAGLELPSEEIRGEILFVLYKLSV

Query:  IEYASNHSTETDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLLGSEPEYYSKFNEKEIDELPLNILFAEAIKGPLLSSDTELQLSTLEL
        IEYASNHSTETDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLLGSEPEYYSKFNEKE DELPLNILFA+AIKGPLLSSD ELQLSTLEL
Subjt:  IEYASNHSTETDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLLGSEPEYYSKFNEKEIDELPLNILFAEAIKGPLLSSDTELQLSTLEL

Query:  IIRYLSSEGTSITPIQLLVEENIVDYVFEILRFS
        IIRYLSSEGTSITPIQLLVEENIVDY+FEILRFS
Subjt:  IIRYLSSEGTSITPIQLLVEENIVDYVFEILRFS

XP_008464336.1 PREDICTED: protein PRD1 isoform X2 [Cucumis melo]

9.57e-217

95.81

Show/hide

Query:  MSYDGHPDDQSIPPSSCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQPTFLRTFLTFHSHFIVAPFVAALCSFDDHSIAR
        MSYDGHPDDQSIPP+SCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQP  LRTFLTFHSHFIVAPFVAALCSFDDHSIAR
Subjt:  MSYDGHPDDQSIPPSSCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQPTFLRTFLTFHSHFIVAPFVAALCSFDDHSIAR

Query:  QLTDLVRRLCDVTEVDGYGSLCDDFIARFSDRISSGSLAWSRRQVYMLHCYGMLLNYRTKNFHGQIKNNDVIVSNLVAGLELPSEEIRGEILFVLYKLSV
        QLTDLVR LCDVTEVDG+GSLCDDFIARFSDR+SSGSLAWSRRQVY+LHCYGMLLNYRTKNFHG+IKNN+ IVSNLVAGLELPSEEIRGEILFVLYKLSV
Subjt:  QLTDLVRRLCDVTEVDGYGSLCDDFIARFSDRISSGSLAWSRRQVYMLHCYGMLLNYRTKNFHGQIKNNDVIVSNLVAGLELPSEEIRGEILFVLYKLSV

Query:  IEYASNHSTETDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLLGSEPEYYSKFNEKEIDELPLNILFAEAIKGPLLSSDTELQLSTLEL
        IEYASNHSTETDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLLGSEPEYYSKFNEKE DELPLNILFA+AIKGPLLSSD ELQLSTLEL
Subjt:  IEYASNHSTETDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLLGSEPEYYSKFNEKEIDELPLNILFAEAIKGPLLSSDTELQLSTLEL

Query:  IIRYLSSEGTSITPIQLLVEENIVDYVFEILRFS
        IIRYLSSEGTSITPIQLLVEENIVDY+FEILRFS
Subjt:  IIRYLSSEGTSITPIQLLVEENIVDYVFEILRFS

XP_011656475.1 protein PUTATIVE RECOMBINATION INITIATION DEFECT 1 isoform X1 [Cucumis sativus]

8.80e-226

100

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Query:  MSYDGHPDDQSIPPSSCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQPTFLRTFLTFHSHFIVAPFVAALCSFDDHSIAR
        MSYDGHPDDQSIPPSSCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQPTFLRTFLTFHSHFIVAPFVAALCSFDDHSIAR
Subjt:  MSYDGHPDDQSIPPSSCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQPTFLRTFLTFHSHFIVAPFVAALCSFDDHSIAR

Query:  QLTDLVRRLCDVTEVDGYGSLCDDFIARFSDRISSGSLAWSRRQVYMLHCYGMLLNYRTKNFHGQIKNNDVIVSNLVAGLELPSEEIRGEILFVLYKLSV
        QLTDLVRRLCDVTEVDGYGSLCDDFIARFSDRISSGSLAWSRRQVYMLHCYGMLLNYRTKNFHGQIKNNDVIVSNLVAGLELPSEEIRGEILFVLYKLSV
Subjt:  QLTDLVRRLCDVTEVDGYGSLCDDFIARFSDRISSGSLAWSRRQVYMLHCYGMLLNYRTKNFHGQIKNNDVIVSNLVAGLELPSEEIRGEILFVLYKLSV

Query:  IEYASNHSTETDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLLGSEPEYYSKFNEKEIDELPLNILFAEAIKGPLLSSDTELQLSTLEL
        IEYASNHSTETDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLLGSEPEYYSKFNEKEIDELPLNILFAEAIKGPLLSSDTELQLSTLEL
Subjt:  IEYASNHSTETDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLLGSEPEYYSKFNEKEIDELPLNILFAEAIKGPLLSSDTELQLSTLEL

Query:  IIRYLSSEGTSITPIQLLVEENIVDYVFEILRFS
        IIRYLSSEGTSITPIQLLVEENIVDYVFEILRFS
Subjt:  IIRYLSSEGTSITPIQLLVEENIVDYVFEILRFS

XP_011656476.1 protein PUTATIVE RECOMBINATION INITIATION DEFECT 1 isoform X2 [Cucumis sativus]

2.54e-221

99.1

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Query:  MSYDGHPDDQSIPPSSCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQPTFLRTFLTFHSHFIVAPFVAALCSFDDHSIAR
        MSYDGHPDDQSIPPSSCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQPTFLRTFLTFHSHFIVAPFVAALCSFDDHSIAR
Subjt:  MSYDGHPDDQSIPPSSCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQPTFLRTFLTFHSHFIVAPFVAALCSFDDHSIAR

Query:  QLTDLVRRLCDVTEVDGYGSLCDDFIARFSDRISSGSLAWSRRQVYMLHCYGMLLNYRTKNFHGQIKNNDVIVSNLVAGLELPSEEIRGEILFVLYKLSV
        QLTDLVRRLCDVTEVDGYGSLCDDFIARFSDRISSGSLAWSRRQ   LHCYGMLLNYRTKNFHGQIKNNDVIVSNLVAGLELPSEEIRGEILFVLYKLSV
Subjt:  QLTDLVRRLCDVTEVDGYGSLCDDFIARFSDRISSGSLAWSRRQVYMLHCYGMLLNYRTKNFHGQIKNNDVIVSNLVAGLELPSEEIRGEILFVLYKLSV

Query:  IEYASNHSTETDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLLGSEPEYYSKFNEKEIDELPLNILFAEAIKGPLLSSDTELQLSTLEL
        IEYASNHSTETDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLLGSEPEYYSKFNEKEIDELPLNILFAEAIKGPLLSSDTELQLSTLEL
Subjt:  IEYASNHSTETDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLLGSEPEYYSKFNEKEIDELPLNILFAEAIKGPLLSSDTELQLSTLEL

Query:  IIRYLSSEGTSITPIQLLVEENIVDYVFEILRFS
        IIRYLSSEGTSITPIQLLVEENIVDYVFEILRFS
Subjt:  IIRYLSSEGTSITPIQLLVEENIVDYVFEILRFS

XP_031743763.1 protein PUTATIVE RECOMBINATION INITIATION DEFECT 1 isoform X4 [Cucumis sativus]

1.23e-227

100

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Query:  MSYDGHPDDQSIPPSSCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQPTFLRTFLTFHSHFIVAPFVAALCSFDDHSIAR
        MSYDGHPDDQSIPPSSCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQPTFLRTFLTFHSHFIVAPFVAALCSFDDHSIAR
Subjt:  MSYDGHPDDQSIPPSSCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQPTFLRTFLTFHSHFIVAPFVAALCSFDDHSIAR

Query:  QLTDLVRRLCDVTEVDGYGSLCDDFIARFSDRISSGSLAWSRRQVYMLHCYGMLLNYRTKNFHGQIKNNDVIVSNLVAGLELPSEEIRGEILFVLYKLSV
        QLTDLVRRLCDVTEVDGYGSLCDDFIARFSDRISSGSLAWSRRQVYMLHCYGMLLNYRTKNFHGQIKNNDVIVSNLVAGLELPSEEIRGEILFVLYKLSV
Subjt:  QLTDLVRRLCDVTEVDGYGSLCDDFIARFSDRISSGSLAWSRRQVYMLHCYGMLLNYRTKNFHGQIKNNDVIVSNLVAGLELPSEEIRGEILFVLYKLSV

Query:  IEYASNHSTETDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLLGSEPEYYSKFNEKEIDELPLNILFAEAIKGPLLSSDTELQLSTLEL
        IEYASNHSTETDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLLGSEPEYYSKFNEKEIDELPLNILFAEAIKGPLLSSDTELQLSTLEL
Subjt:  IEYASNHSTETDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLLGSEPEYYSKFNEKEIDELPLNILFAEAIKGPLLSSDTELQLSTLEL

Query:  IIRYLSSEGTSITPIQLLVEENIVDYVFEILRFS
        IIRYLSSEGTSITPIQLLVEENIVDYVFEILRFS
Subjt:  IIRYLSSEGTSITPIQLLVEENIVDYVFEILRFS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KDQ9 Uncharacterized protein

4.26e-226

100

Show/hide

Query:  MSYDGHPDDQSIPPSSCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQPTFLRTFLTFHSHFIVAPFVAALCSFDDHSIAR
        MSYDGHPDDQSIPPSSCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQPTFLRTFLTFHSHFIVAPFVAALCSFDDHSIAR
Subjt:  MSYDGHPDDQSIPPSSCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQPTFLRTFLTFHSHFIVAPFVAALCSFDDHSIAR

Query:  QLTDLVRRLCDVTEVDGYGSLCDDFIARFSDRISSGSLAWSRRQVYMLHCYGMLLNYRTKNFHGQIKNNDVIVSNLVAGLELPSEEIRGEILFVLYKLSV
        QLTDLVRRLCDVTEVDGYGSLCDDFIARFSDRISSGSLAWSRRQVYMLHCYGMLLNYRTKNFHGQIKNNDVIVSNLVAGLELPSEEIRGEILFVLYKLSV
Subjt:  QLTDLVRRLCDVTEVDGYGSLCDDFIARFSDRISSGSLAWSRRQVYMLHCYGMLLNYRTKNFHGQIKNNDVIVSNLVAGLELPSEEIRGEILFVLYKLSV

Query:  IEYASNHSTETDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLLGSEPEYYSKFNEKEIDELPLNILFAEAIKGPLLSSDTELQLSTLEL
        IEYASNHSTETDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLLGSEPEYYSKFNEKEIDELPLNILFAEAIKGPLLSSDTELQLSTLEL
Subjt:  IEYASNHSTETDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLLGSEPEYYSKFNEKEIDELPLNILFAEAIKGPLLSSDTELQLSTLEL

Query:  IIRYLSSEGTSITPIQLLVEENIVDYVFEILRFS
        IIRYLSSEGTSITPIQLLVEENIVDYVFEILRFS
Subjt:  IIRYLSSEGTSITPIQLLVEENIVDYVFEILRFS

A0A1S3CLC8 protein PRD1 isoform X1

1.16e-216

95.81

Show/hide

Query:  MSYDGHPDDQSIPPSSCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQPTFLRTFLTFHSHFIVAPFVAALCSFDDHSIAR
        MSYDGHPDDQSIPP+SCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQP  LRTFLTFHSHFIVAPFVAALCSFDDHSIAR
Subjt:  MSYDGHPDDQSIPPSSCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQPTFLRTFLTFHSHFIVAPFVAALCSFDDHSIAR

Query:  QLTDLVRRLCDVTEVDGYGSLCDDFIARFSDRISSGSLAWSRRQVYMLHCYGMLLNYRTKNFHGQIKNNDVIVSNLVAGLELPSEEIRGEILFVLYKLSV
        QLTDLVR LCDVTEVDG+GSLCDDFIARFSDR+SSGSLAWSRRQVY+LHCYGMLLNYRTKNFHG+IKNN+ IVSNLVAGLELPSEEIRGEILFVLYKLSV
Subjt:  QLTDLVRRLCDVTEVDGYGSLCDDFIARFSDRISSGSLAWSRRQVYMLHCYGMLLNYRTKNFHGQIKNNDVIVSNLVAGLELPSEEIRGEILFVLYKLSV

Query:  IEYASNHSTETDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLLGSEPEYYSKFNEKEIDELPLNILFAEAIKGPLLSSDTELQLSTLEL
        IEYASNHSTETDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLLGSEPEYYSKFNEKE DELPLNILFA+AIKGPLLSSD ELQLSTLEL
Subjt:  IEYASNHSTETDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLLGSEPEYYSKFNEKEIDELPLNILFAEAIKGPLLSSDTELQLSTLEL

Query:  IIRYLSSEGTSITPIQLLVEENIVDYVFEILRFS
        IIRYLSSEGTSITPIQLLVEENIVDY+FEILRFS
Subjt:  IIRYLSSEGTSITPIQLLVEENIVDYVFEILRFS

A0A1S4E4N2 protein PRD1 isoform X2

4.63e-217

95.81

Show/hide

Query:  MSYDGHPDDQSIPPSSCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQPTFLRTFLTFHSHFIVAPFVAALCSFDDHSIAR
        MSYDGHPDDQSIPP+SCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQP  LRTFLTFHSHFIVAPFVAALCSFDDHSIAR
Subjt:  MSYDGHPDDQSIPPSSCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQPTFLRTFLTFHSHFIVAPFVAALCSFDDHSIAR

Query:  QLTDLVRRLCDVTEVDGYGSLCDDFIARFSDRISSGSLAWSRRQVYMLHCYGMLLNYRTKNFHGQIKNNDVIVSNLVAGLELPSEEIRGEILFVLYKLSV
        QLTDLVR LCDVTEVDG+GSLCDDFIARFSDR+SSGSLAWSRRQVY+LHCYGMLLNYRTKNFHG+IKNN+ IVSNLVAGLELPSEEIRGEILFVLYKLSV
Subjt:  QLTDLVRRLCDVTEVDGYGSLCDDFIARFSDRISSGSLAWSRRQVYMLHCYGMLLNYRTKNFHGQIKNNDVIVSNLVAGLELPSEEIRGEILFVLYKLSV

Query:  IEYASNHSTETDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLLGSEPEYYSKFNEKEIDELPLNILFAEAIKGPLLSSDTELQLSTLEL
        IEYASNHSTETDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLLGSEPEYYSKFNEKE DELPLNILFA+AIKGPLLSSD ELQLSTLEL
Subjt:  IEYASNHSTETDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLLGSEPEYYSKFNEKEIDELPLNILFAEAIKGPLLSSDTELQLSTLEL

Query:  IIRYLSSEGTSITPIQLLVEENIVDYVFEILRFS
        IIRYLSSEGTSITPIQLLVEENIVDY+FEILRFS
Subjt:  IIRYLSSEGTSITPIQLLVEENIVDYVFEILRFS

A0A5D3BTV9 Protein PRD1 isoform X1

1.18e-212

95.21

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Query:  MSYDGHPDDQSIPPSSCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQPTFLRTFLTFHSHFIVAPFVAALCSFDDHSIAR
        MSYDGHPDDQSIPP+SCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQP  LRTFLTFHSHFIVAPFVAALCSFDDHSIAR
Subjt:  MSYDGHPDDQSIPPSSCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQPTFLRTFLTFHSHFIVAPFVAALCSFDDHSIAR

Query:  QLTDLVRRLCDVTEVDGYGSLCDDFIARFSDRISSGSLAWSRRQVYMLHCYGMLLNYRTKNFHGQIKNNDVIVSNLVAGLELPSEEIRGEILFVLYKLSV
        QLTDLVR LCDVTEVDG+GSLCDDFIARFSDR+SSGSLAWSRRQ   LHCYGMLLNYRTKNFHG+IKNN+ IVSNLVAGLELPSEEIRGEILFVLYKLSV
Subjt:  QLTDLVRRLCDVTEVDGYGSLCDDFIARFSDRISSGSLAWSRRQVYMLHCYGMLLNYRTKNFHGQIKNNDVIVSNLVAGLELPSEEIRGEILFVLYKLSV

Query:  IEYASNHSTETDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLLGSEPEYYSKFNEKEIDELPLNILFAEAIKGPLLSSDTELQLSTLEL
        IEYASNHSTETDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLLGSEPEYYSKFNEKE DELPLNILFA+AIKGPLLSSD ELQLSTLEL
Subjt:  IEYASNHSTETDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLLGSEPEYYSKFNEKEIDELPLNILFAEAIKGPLLSSDTELQLSTLEL

Query:  IIRYLSSEGTSITPIQLLVEENIVDYVFEILRFS
        IIRYLSSEGTSITPIQLLVEENIVDY+FEILRFS
Subjt:  IIRYLSSEGTSITPIQLLVEENIVDYVFEILRFS

A0A6J1JSI6 protein PRD1

3.33e-190

87.16

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Query:  DDQSIPPSSCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQPTFLRTFLTFHSHFIVAPFVAALCSFDDHSIARQLTDLVR
        DD+SIPP SCSH HPSSLCLHTQEGG ICLLCFSNLISDPLS TVHVSYALSQ SQALSQP FLRTFL+FHSHF+VAPFV ALCSFDD  +ARQLTDLVR
Subjt:  DDQSIPPSSCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQPTFLRTFLTFHSHFIVAPFVAALCSFDDHSIARQLTDLVR

Query:  RLCDVTEVDGYGSLCDDFIARFSDRISSGSLAWSRRQVYMLHCYGMLLNYRTKNFHGQIKNNDVIVSNLVAGLELPSEEIRGEILFVLYKLSVIEYASNH
         LCDV+E DG GSLCDDF+AR SDR+SSG+LAWSRRQVYMLHCYGMLLNYRTKNFHGQIK+ND +VSNLVAGLELPSEE+RGEILFVLYKLS I+YASNH
Subjt:  RLCDVTEVDGYGSLCDDFIARFSDRISSGSLAWSRRQVYMLHCYGMLLNYRTKNFHGQIKNNDVIVSNLVAGLELPSEEIRGEILFVLYKLSVIEYASNH

Query:  STETDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLLGSEPEYYSKFNEKEIDELPLNILFAEAIKGPLLSSDTELQLSTLELIIRYLSS
         TE D LSA+CPKLLYLSLEALMKTQNDDVRLNCVALLTVL QRGLLG+E E+YSKFNEKE DELPLNILFAEAIKGPLLSSD ELQLSTLELII YLS+
Subjt:  STETDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLLGSEPEYYSKFNEKEIDELPLNILFAEAIKGPLLSSDTELQLSTLELIIRYLSS

Query:  EGTSITPIQLLVEENIVDYVFEILRFS
        EGTSI  IQLLVEENIVDYVFEI+RFS
Subjt:  EGTSITPIQLLVEENIVDYVFEILRFS

SwissProt top hits

e value

%identity

Alignment

O23277 Protein PUTATIVE RECOMBINATION INITIATION DEFECT 1

4.4e-93

52.96

Show/hide

Query:  QSIPPSSCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQPTFLRTFLTFHSHFIVAPFVAALCSFDDHSIARQLTDLVRRL
        QS+ P  C++GH S++ L   +GG  CL+CFSNL+SDP   TVHVSYAL Q S A+S+P FLRT L+ H HF+V+P V AL S DD  IA Q+ D++  L
Subjt:  QSIPPSSCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQPTFLRTFLTFHSHFIVAPFVAALCSFDDHSIARQLTDLVRRL

Query:  CDVTEVDGYGSLCDDFIARFSDRISSGSLAWSRRQVYMLHCYGMLLNYRTKNFHGQIKNNDVIVSNLVAGLELPSEEIRGEILFVLYKLSVIEYASNHST
        C V E     S+ +DF+ R SD++SSG+L WSRRQ++MLHC+G+L++    N +  I++ + +V  LV GL+LPSEEIRGEILF LYK S +++   +  
Subjt:  CDVTEVDGYGSLCDDFIARFSDRISSGSLAWSRRQVYMLHCYGMLLNYRTKNFHGQIKNNDVIVSNLVAGLELPSEEIRGEILFVLYKLSVIEYASNHST

Query:  ETDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLL-GSEPEYYSKFNEKEIDELP------------LNILFAEAIKGPLLSSDTELQLS
          +VLS  CPKLL LSLEAL KTQ DDVRLNCVALLT+L Q+GLL  S     S  +  E+D+ P            LN+LFAEAIKGPLLS+D+E+Q+ 
Subjt:  ETDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLL-GSEPEYYSKFNEKEIDELP------------LNILFAEAIKGPLLSSDTELQLS

Query:  TLELIIRYLSSEGTSITPIQLLVEENIVDYVFEILRFS
        TL+LI  Y+S E T    IQ++VEEN+ DY+FEILR S
Subjt:  TLELIIRYLSSEGTSITPIQLLVEENIVDYVFEILRFS

Arabidopsis top hits

e value

%identity

Alignment

AT4G14180.1 putative recombination initiation defect 1

1.7e-95

52.92

Show/hide

Query:  QSIPPSSCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQPTFLRTFLTFHSHFIVAPFVAALCSFDDHSIARQLTDLVRRL
        QS+ P  C++GH S++ L   +GG  CL+CFSNL+SDP   TVHVSYAL Q S A+S+P FLRT L+ H HF+V+P V AL S DD  IA Q+ D++  L
Subjt:  QSIPPSSCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQPTFLRTFLTFHSHFIVAPFVAALCSFDDHSIARQLTDLVRRL

Query:  CDVTEVDGYGSLCDDFIARFSDRISSGSLAWSRRQVYMLHCYGMLLNYRTKNFHGQIKNNDVIVSNLVAGLELPSEEIRGEILFVLYKLSVIEYASNHST
        C V E     S+ +DF+ R SD++SSG+L WSRRQ++MLHC+G+L++    N +  I++ + +V  LV GL+LPSEEIRGEILF LYK S +++   +  
Subjt:  CDVTEVDGYGSLCDDFIARFSDRISSGSLAWSRRQVYMLHCYGMLLNYRTKNFHGQIKNNDVIVSNLVAGLELPSEEIRGEILFVLYKLSVIEYASNHST

Query:  ETDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLL-GSEPEYYSKFNEKEIDELP------------LNILFAEAIKGPLLSSDTELQLS
          +VLS  CPKLL LSLEAL KTQ DDVRLNCVALLT+L Q+GLL  S     S  +  E+D+ P            LN+LFAEAIKGPLLS+D+E+Q+ 
Subjt:  ETDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLL-GSEPEYYSKFNEKEIDELP------------LNILFAEAIKGPLLSSDTELQLS

Query:  TLELIIRYLSSEGTSITPIQLLVEENIVDYVFEILRFSGEQS
        TL+LI  Y+S E T    IQ++VEEN+ DY+FEILR S E S
Subjt:  TLELIIRYLSSEGTSITPIQLLVEENIVDYVFEILRFSGEQS

Sequences

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CDS sequence

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ATGTCGTACGACGGCCATCCAGACGATCAATCCATTCCTCCAAGTTCATGCTCCCATGGCCACCCATCCTCGCTCTGCCTCCACACGCAGGAAGGTGGAATCATT
TGCCTCCTCTGCTTCTCCAATCTCATCTCCGATCCCCTCTCTTCCACAGTTCACGTCTCCTACGCACTCTCCCAGTTCTCCCAAGCTCTTTCTCAGCCCACATTC
CTCCGCACCTTCCTCACTTTCCATTCTCACTTCATTGTCGCTCCGTTCGTCGCCGCACTCTGCTCCTTCGACGATCACTCCATTGCTCGCCAACTCACTGATCTT
GTTCGCCGCCTCTGTGATGTCACTGAAGTTGACGGTTATGGATCTCTTTGCGACGACTTTATTGCAAGATTTTCTGATCGGATTTCTTCTGGTTCCTTGGCTTGG
AGCCGCCGTCAGGTGTATATGCTTCATTGTTATGGAATGCTGTTAAACTATCGGACAAAAAATTTCCATGGCCAAATTAAGAACAACGATGTCATTGTATCAAAT
CTTGTGGCAGGCCTTGAATTACCAAGCGAGGAGATACGGGGAGAGATCCTCTTTGTCTTATACAAATTGTCCGTAATTGAATATGCATCTAACCACAGCACTGAA
ACTGATGTTCTCTCTGCATTTTGCCCAAAACTTCTGTACTTGTCTCTGGAGGCCCTCATGAAGACTCAAAATGATGATGTCAGATTGAACTGTGTAGCACTTCTA
ACTGTACTGGTTCAAAGAGGGCTCTTGGGGAGTGAACCTGAATACTATTCAAAGTTCAACGAGAAGGAAATAGACGAACTCCCTTTGAATATTTTGTTCGCTGAG
GCTATCAAAGGTCCTCTACTATCGTCAGACACAGAGCTCCAATTAAGCACTCTGGAGCTAATAATCCGTTATTTGTCCTCCGAAGGCACTTCCATCACGCCGATC
CAACTATTGGTTGAAGAAAATATAGTGGATTATGTATTTGAGATATTACGATTTTCAGGTGAGCAATCATAG

mRNA sequence

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Protein sequence

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MSYDGHPDDQSIPPSSCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQFSQALSQPTFLRTFLTFHSHFIVAPFVAALCSFDDHSIARQLTDL
VRRLCDVTEVDGYGSLCDDFIARFSDRISSGSLAWSRRQVYMLHCYGMLLNYRTKNFHGQIKNNDVIVSNLVAGLELPSEEIRGEILFVLYKLSVIEYASNHSTE
TDVLSAFCPKLLYLSLEALMKTQNDDVRLNCVALLTVLVQRGLLGSEPEYYSKFNEKEIDELPLNILFAEAIKGPLLSSDTELQLSTLELIIRYLSSEGTSITPI
QLLVEENIVDYVFEILRFSGEQS

CsGy6G002910 (gene) of Cucumber (Gy14) v2.1 genome