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CsGy6G003390 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy6G003390
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionpolcalcin Syr v 3-like
Genome locationGy14Chr6:3066511..3066765
RNA-Seq ExpressionCsGy6G003390
SyntenyCsGy6G003390
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646616.1 hypothetical protein Csa_005682 [Cucumis sativus]2.65e-50100Show/hide
Query:  MADSDGNRMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKE
        MADSDGNRMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKE
Subjt:  MADSDGNRMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKE

XP_008445690.1 PREDICTED: polcalcin Syr v 3-like [Cucumis melo]8.30e-5094.05Show/hide
Query:  MADSDGNRMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL
        MADSDG +MECERIFKRFD+NGDGKISLSELE ALHALGSSAPEEVGRRMSEIDKDGNG+ISLEELCDFQRANPDLMKEVCKRL
Subjt:  MADSDGNRMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL

XP_022150429.1 polcalcin Syr v 3-like [Momordica charantia]5.37e-4485.71Show/hide
Query:  MADSDGNRMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL
        MAD   NR ECERIF RFD NGDG+ISLSELE+AL ALGSS+PEEV RRMSEIDKDG+GYISLEELCDFQRANPDLMKEVCKRL
Subjt:  MADSDGNRMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL

XP_022929895.1 polcalcin Phl p 7-like [Cucurbita moschata]2.66e-4484.52Show/hide
Query:  MADSDGNRMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL
        MA+S+  R ECERIF RFD NGDGKISLSELE ALHALGSS+PEEV RRMSEIDKDGNG+ISL+ELC+FQRANPDLMKEVCKRL
Subjt:  MADSDGNRMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL

XP_038886760.1 polcalcin Phl p 7-like [Benincasa hispida]1.60e-4586.9Show/hide
Query:  MADSDGNRMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL
        MADS+G R ECERIFKRFD +GDGKISLSELE+AL ALGSS+PEEV RRMSEIDKDGNG+ISL+ELCDFQRANPDLMKEVCKRL
Subjt:  MADSDGNRMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL

TrEMBL top hitse value%identityAlignment
A0A0A0KAW9 Uncharacterized protein1.09e-54100Show/hide
Query:  MADSDGNRMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL
        MADSDGNRMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL
Subjt:  MADSDGNRMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL

A0A1S3BDB5 polcalcin Syr v 3-like4.02e-5094.05Show/hide
Query:  MADSDGNRMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL
        MADSDG +MECERIFKRFD+NGDGKISLSELE ALHALGSSAPEEVGRRMSEIDKDGNG+ISLEELCDFQRANPDLMKEVCKRL
Subjt:  MADSDGNRMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL

A0A5A7V7E6 Polcalcin Syr v 3-like4.02e-5094.05Show/hide
Query:  MADSDGNRMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL
        MADSDG +MECERIFKRFD+NGDGKISLSELE ALHALGSSAPEEVGRRMSEIDKDGNG+ISLEELCDFQRANPDLMKEVCKRL
Subjt:  MADSDGNRMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL

A0A6J1DA15 polcalcin Syr v 3-like2.60e-4485.71Show/hide
Query:  MADSDGNRMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL
        MAD   NR ECERIF RFD NGDG+ISLSELE+AL ALGSS+PEEV RRMSEIDKDG+GYISLEELCDFQRANPDLMKEVCKRL
Subjt:  MADSDGNRMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL

A0A6J1EVJ6 polcalcin Phl p 7-like1.29e-4484.52Show/hide
Query:  MADSDGNRMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL
        MA+S+  R ECERIF RFD NGDGKISLSELE ALHALGSS+PEEV RRMSEIDKDGNG+ISL+ELC+FQRANPDLMKEVCKRL
Subjt:  MADSDGNRMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL

SwissProt top hitse value%identityAlignment
O81092 Polcalcin Ole e 31.5e-1859.76Show/hide
Query:  MADSDGNRMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCK
        MAD      E ERIFKRFD NGDGKIS SEL   L  LGS  PEE+ R M+EID DG+G+IS EE   F RAN  L+K+V K
Subjt:  MADSDGNRMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCK

O82040 Polcalcin Phl p 73.4e-1861.64Show/hide
Query:  ECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCK
        + ERIFKRFD NGDGKISLSEL  AL  LGS++ +EV R M+EID DG+G+I   E   F  ANP LMK+V K
Subjt:  ECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCK

P58171 Polcalcin Syr v 36.8e-1964.38Show/hide
Query:  ECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCK
        E ERIFKRFD NGDGKIS SEL   L  LGS  PEE+ R M+EID DG+G+IS EE  DF RAN  L+K+V K
Subjt:  ECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCK

Q39419 Polcalcin Bet v 44.4e-1857.5Show/hide
Query:  DSDGNRMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCK
        D   ++ E ERIFKRFD NGDGKIS +EL  AL  LGS  P+EV   M+EID DG+G+IS +E  DF RAN  L+K+V K
Subjt:  DSDGNRMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCK

Q84V36 Polcalcin Che a 33.4e-1864.79Show/hide
Query:  ERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCK
        ERIFKRFD NGDGKIS SEL  AL  LGS  P+EV R M+EID DG+G+IS +E  DF RAN  L+K+V K
Subjt:  ERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCK

Arabidopsis top hitse value%identityAlignment
AT1G24620.1 EF hand calcium-binding protein family2.4e-1147.76Show/hide
Query:  ECERIFKRFDVNGDGKISLSELEAALHALGSSAP-EEVGRRMSEIDKDGNGYISLEELCDFQRANPD
        E E +FK+FDVNGDGKIS  EL A + +LG   P EE+ + ++EID+ G+GYI+ EE  +      D
Subjt:  ECERIFKRFDVNGDGKISLSELEAALHALGSSAP-EEVGRRMSEIDKDGNGYISLEELCDFQRANPD

AT1G73630.1 EF hand calcium-binding protein family3.8e-0943.94Show/hide
Query:  MECERIFKRFDVNGDGKISLSELEAALHALGSS-APEEVGRRMSEIDKDGNGYISLEELCDFQRAN
        ME +++F +FD NGDGKIS+SEL     ++G+S   EE+ R + EID D +G+I+ EE     R++
Subjt:  MECERIFKRFDVNGDGKISLSELEAALHALGSS-APEEVGRRMSEIDKDGNGYISLEELCDFQRAN

AT3G03430.1 Calcium-binding EF-hand family protein5.9e-1856.1Show/hide
Query:  MADSDGNRMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCK
        MAD+   + E +RIFK+FD NGDGKIS +EL  AL  LGS   E++ R M+EID DG+GYIS +E  DF  AN  LMK+V K
Subjt:  MADSDGNRMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCK

AT5G17480.1 pollen calcium-binding protein 17.7e-1856.1Show/hide
Query:  MADSDGNRMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCK
        MAD+   + E +RIFK+FD NGDGKIS +ELE AL  LGS   ++V R M+EID DG+G IS +E  DF  AN  LMK+V K
Subjt:  MADSDGNRMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCK

AT5G37770.1 EF hand calcium-binding protein family5.9e-1047.54Show/hide
Query:  GNRMECERIFKRFDVNGDGKISLSELEAALHALGSSA-PEEVGRRMSEIDKDGNGYISLEE
        G+  + +++F+RFD NGDGKIS+ EL+  + AL  +A PEE    M + D DGNG+I L+E
Subjt:  GNRMECERIFKRFDVNGDGKISLSELEAALHALGSSA-PEEVGRRMSEIDKDGNGYISLEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGACTCAGATGGAAACAGAATGGAATGCGAGCGAATCTTTAAGCGGTTCGATGTCAACGGCGACGGAAAGATCTCGCTATCGGAGCTTGAGGCTGCTCTGCACGC
CCTTGGCTCCTCTGCGCCGGAAGAGGTTGGACGACGAATGTCGGAGATCGACAAGGACGGAAACGGTTACATTTCGCTTGAGGAACTCTGTGATTTTCAGAGGGCTAATC
CTGATTTGATGAAGGAGGTTTGCAAGAGGCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGACTCAGATGGAAACAGAATGGAATGCGAGCGAATCTTTAAGCGGTTCGATGTCAACGGCGACGGAAAGATCTCGCTATCGGAGCTTGAGGCTGCTCTGCACGC
CCTTGGCTCCTCTGCGCCGGAAGAGGTTGGACGACGAATGTCGGAGATCGACAAGGACGGAAACGGTTACATTTCGCTTGAGGAACTCTGTGATTTTCAGAGGGCTAATC
CTGATTTGATGAAGGAGGTTTGCAAGAGGCTTTAG
Protein sequenceShow/hide protein sequence
MADSDGNRMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGYISLEELCDFQRANPDLMKEVCKRL