; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy6G007065 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy6G007065
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description60S ribosomal protein L23
Genome locationGy14Chr6:6073346..6075987
RNA-Seq ExpressionCsGy6G007065
SyntenyCsGy6G007065
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000218 - Ribosomal protein L14P
IPR036853 - Ribosomal protein L14 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5465864.1 hypothetical protein F2P56_015831 [Juglans regia]3.03e-65100Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG
        MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG

KZN07895.1 hypothetical protein DCAR_000564 [Daucus carota subsp. sativus]3.58e-6697.12Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG
        MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEG
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG

Query:  LPIF
        + IF
Subjt:  LPIF

TQE09579.1 hypothetical protein C1H46_004798 [Malus baccata]2.75e-65100Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG
        MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG

XP_015887784.1 60S ribosomal protein L23 [Ziziphus jujuba]8.03e-6694.44Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG
        MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG

Query:  LPIFILSL
           F++ L
Subjt:  LPIFILSL

XP_030933959.1 60S ribosomal protein L23 isoform X2 [Quercus lobata]2.07e-6592.86Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG
        MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG

Query:  LPIFILSLFGFL
        +   +   FGFL
Subjt:  LPIFILSLFGFL

TrEMBL top hitse value%identityAlignment
A0A166FKP1 Uncharacterized protein1.73e-6697.12Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG
        MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEG
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG

Query:  LPIF
        + IF
Subjt:  LPIF

A0A540NEW8 Uncharacterized protein1.33e-65100Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG
        MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG

A0A6J5TFT6 Uncharacterized protein1.79e-6598.06Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG
        MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG

Query:  LPI
          I
Subjt:  LPI

A0A6P4A2P7 60S ribosomal protein L233.89e-6694.44Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG
        MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG

Query:  LPIFILSL
           F++ L
Subjt:  LPIFILSL

A0A7N0TEW3 Uncharacterized protein4.84e-6695.24Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG
        MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFE 
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEG

Query:  LPIFI
        + +FI
Subjt:  LPIFI

SwissProt top hitse value%identityAlignment
P49690 60S ribosomal protein L239.5e-5097.98Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE
        MSKRGRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE

Q07760 60S ribosomal protein L235.6e-5096.97Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE
        MSKRGRGGSAGNKFRMSLGLPVAAT+NCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKV+PAV+VRQRKPWRRKDGVFMYFE
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE

Q3T057 60S ribosomal protein L235.6e-4284.85Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE
        MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDMVMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFE
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE

Q6PC14 60S ribosomal protein L232.5e-4285.86Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE
        MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLPSA VGDMVMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFE
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE

Q9XEK8 60S ribosomal protein L231.6e-4488.89Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE
        MSKRGRGGS+GNKFRMSLGLPV A VNCADNTGAKNLY+IS  G++GRLNRLP+A VGDMVMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFE
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE

Arabidopsis top hitse value%identityAlignment
AT1G04480.1 Ribosomal protein L14p/L23e family protein6.7e-5197.98Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE
        MSKRGRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE

AT2G33370.1 Ribosomal protein L14p/L23e family protein6.7e-5197.98Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE
        MSKRGRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE

AT3G04400.1 Ribosomal protein L14p/L23e family protein6.7e-5197.98Show/hide
Query:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE
        MSKRGRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE
Subjt:  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE

AT3G04400.2 Ribosomal protein L14p/L23e family protein4.0e-43100Show/hide
Query:  MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE
        MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE
Subjt:  MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFE

ATCG00780.1 ribosomal protein L141.6e-0433.77Show/hide
Query:  VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVLPAVIVRQRKPWRRKDGVFMYFE
        +N ADN+GA+ L  I + G   R      A +GD+++A +K+  P+    R +V+ AVIVR  K  +R +G  + ++
Subjt:  VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVLPAVIVRQRKPWRRKDGVFMYFE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAAGCGAGGTAGGGGAGGATCCGCTGGGAACAAGTTTCGGATGTCACTGGGTCTTCCAGTGGCTGCTACTGTCAACTGTGCAGACAACACGGGAGCTAAGAATCT
CTACATCATTTCCGTGAAAGGGATCAAGGGTCGTCTTAATAGGTTGCCATCCGCATGTGTTGGTGATATGGTTATGGCTACTGTCAAGAAAGGCAAGCCTGATCTCAGGA
AGAAGGTCTTGCCTGCTGTTATTGTTAGGCAGCGCAAGCCATGGCGCCGAAAGGATGGTGTTTTCATGTATTTCGAAGGTTTGCCTATTTTCATCCTTTCCCTATTTGGT
TTTTTGGCGTTGTTGTTTGTTTCTGCTTCGTTGAATGGAGGAGGATCTTGTTTAACTTACTTGGGTGGGAAGTCGTTATGGGTGTTGAATTAG
mRNA sequenceShow/hide mRNA sequence
TGCTTCTGTTATAGCGGCCGCGGGAGAGAAGCCAAAATCCATCGACAATGTCGAAGCGAGGTAGGGGAGGATCCGCTGGGAACAAGTTTCGGATGTCACTGGGTCTTCCA
GTGGCTGCTACTGTCAACTGTGCAGACAACACGGGAGCTAAGAATCTCTACATCATTTCCGTGAAAGGGATCAAGGGTCGTCTTAATAGGTTGCCATCCGCATGTGTTGG
TGATATGGTTATGGCTACTGTCAAGAAAGGCAAGCCTGATCTCAGGAAGAAGGTCTTGCCTGCTGTTATTGTTAGGCAGCGCAAGCCATGGCGCCGAAAGGATGGTGTTT
TCATGTATTTCGAAGGTTTGCCTATTTTCATCCTTTCCCTATTTGGTTTTTTGGCGTTGTTGTTTGTTTCTGCTTCGTTGAATGGAGGAGGATCTTGTTTAACTTACTTG
GGTGGGAAGTCGTTATGGGTGTTGAATTAGGACTATTTACGATACTAATTGTTGGGTTATCAGTGTTATCTGTGGGTTGAACTTGCAATTTCGTAACTGTAGCTTTCTCT
TTGCTGTTCGTATGGTCGTTTATCTCATTACTGTGAAAATTTATTCAGAACTTGGCTGCCTCGTGTCATATTACTTCTCCATATGAAGGACTTATGGTTTGTTGTTCTTT
TTTATTTTTTTATTAAAATAAGTTGTCCCCTTTTTTCCAATATATTTTAATGGTTATCCATTTGATTGACGAGCCTTATGTGTAAACGCCATTTTATGACTAGGGCAACC
ATTTTTCTTTCAGTATACGATAGCTTCTAGAATTTTTGAATTTGCTACACCTTGTAAGATTGTAGAAAGATGAATGTCTAAGTTTATGAGAAAGGATTGCTACTTCCTTT
TATTTTGTAGTTTGATTGTGTATAATCTGGATCCCATTAGGATGGTTTATGTTCTTTTTCTGTATTCACAAACAATTCTCTCTTGAAAATTGGACGTGATTTTTTAATAC
GTTAATTGGGACTGTTCCATTGTAATTTGGAGGCTTTGTTTTTGTCCTTTTGAGATTTTAATATCTCTGAAATGTTGGCTGGGAAGTAACGCATTTTATCCCTTTTTGAT
CAAGAAGTTTGCTGGACAATTGATTGTGAAGTAGTAGTGAATAAGATGATTGTACTGGATTCAAATGTAAATTCTTTCCACTATAAACCATTACAACTTGTTGTTGTGTT
TTTCTTACATATATCGTATTTTTTCTCTTTCAGATAATGCTGGTGTTATCGTCAATCCCAAGGGCGAAATGAAAGGTTCGGCAATTACTGGCCCCATCGGAAAGGAATGT
GCTGATCTCTGGCCGAGGATTGCAAGTGCGGCGAATGCCATCGCATGAGAGCCAAAGCCATTATAGGGTCATGCCATGTTTTAGATTTTCTTCTAGTTTTCTTTTGGTTG
GGTTTGCCTCTGCTTTGTTAGACACTGATGCAAGCTCATTTTTGAGTTCTCTTAATCTTACTGTATCGCTCAAGTTTAAATTGGTGTTGCCTTTTGCTCCTTTCTGTTTC
ATGAACTCTTGCAGTTTTTTCTATAGATACGAAGGTTGCATGTCTTATAACGTTAATATTTGAAGAAGCATTAGAAAGTTTTCGTCGTTCTTGCCTGCTCTTGTTGGGAA
AGTTCCATTCTAAAATCAACCCATGAAGATTGATGAGAATATTATTATTATTTTTTTGAAATAATAGTTTATTGGTGGAATGTTTTTGAGGTTGAGGGTAGGTTAGGTGA
CATTTTCAGAAGAGGTTTTCGTCATTGATTGGTTGTGATGTAGTTATTTGAAAGTAGTAGGCTACACAAGCATTGAAATTGTTTCTATGAGTTCTATGAACTATTTGACT
CATAGTGTGTTTGAACTTGTGAAAAATTATAGCGAAATACGAGAGATCAATTGAGCTATAATTCTCAAAATCAATTTACCCATC
Protein sequenceShow/hide protein sequence
MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEGLPIFILSLFG
FLALLFVSASLNGGGSCLTYLGGKSLWVLN