; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy6G009330 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy6G009330
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionNuclear transcription factor Y subunit B-3
Genome locationGy14Chr6:7797477..7798172
RNA-Seq ExpressionCsGy6G009330
SyntenyCsGy6G009330
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060802.1 uncharacterized protein E6C27_scaffold137G00220 [Cucumis melo var. makuwa]7.45e-10489.25Show/hide
Query:  MSMLYFSISKRNSLPIRKFVQE------EEEEEEEEDQKQLTFFSDHLKSSSASAPTIEDLLSESECADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDD
        MSMLYFSISKR+SLPI+KFVQE      EEEEEEEEDQK+LTFFSDHLKSSSASAPT  DLLSESECADDNFTTTEESEVEWPYFDHRF K R+PHRSDD
Subjt:  MSMLYFSISKRNSLPIRKFVQE------EEEEEEEEDQKQLTFFSDHLKSSSASAPTIEDLLSESECADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDD

Query:  GSISDEESLIEIALPTGHYVSRKFDDVDEDED--DISFRYQKLTDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        GSISDEESLIEIALPTGHYVSRKFDDVDEDED  D  FRYQKL+DFQ+KNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  GSISDEESLIEIALPTGHYVSRKFDDVDEDED--DISFRYQKLTDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

TYK11971.1 uncharacterized protein E5676_scaffold177G001550 [Cucumis melo var. makuwa]1.18e-10391.11Show/hide
Query:  MSMLYFSISKRNSLPIRKFVQEEEEEEEEEDQKQLTFFSDHLKSSSASAPTIEDLLSESECADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDE
        MSMLYFSISKR+SLPI+KFVQE+EEEEEE DQK+LTFFSDHLKSSSASAPT  DLLSESECADDNFTTTEESEVEWPYFDHRF K R+PHRSDDGSISDE
Subjt:  MSMLYFSISKRNSLPIRKFVQEEEEEEEEEDQKQLTFFSDHLKSSSASAPTIEDLLSESECADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDE

Query:  ESLIEIALPTGHYVSRKFDDVDEDED--DISFRYQKLTDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        ESLIEIALPTGHYVSRKFDDVDEDED  D  FRYQKL+DFQ+KNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  ESLIEIALPTGHYVSRKFDDVDEDED--DISFRYQKLTDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

XP_008464163.1 PREDICTED: uncharacterized protein LOC103502111 [Cucumis melo]3.34e-13690.56Show/hide
Query:  MKLKIKVENQMANTLPLRKPSSWCIVLTFFLLCLGFWGFRFFSSFLFTSIALIMSMLYFSISKRNSLPIRKFVQEEEEEEEEEDQKQLTFFSDHLKSSSA
        MKLKIKVENQMANT PLRKP SW +VLTFFL CLGF GFRFFSSFLFTSIALIMSMLYFSISKR+SLPI+KFVQE+EEEEEE DQK+LTFFSDHLKSSSA
Subjt:  MKLKIKVENQMANTLPLRKPSSWCIVLTFFLLCLGFWGFRFFSSFLFTSIALIMSMLYFSISKRNSLPIRKFVQEEEEEEEEEDQKQLTFFSDHLKSSSA

Query:  SAPTIEDLLSESECADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDED--DISFRYQKLTDFQRKNLVE
        SAPT  DLLSESECADDNFTTTEESEVEWPYFDHRF K R+PHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDED  D  FRYQKL+DFQ+KNLVE
Subjt:  SAPTIEDLLSESECADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDED--DISFRYQKLTDFQRKNLVE

Query:  VLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        VLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  VLAEINDINEEENLIEIDISMGSIKYSRFEIEA

XP_011656887.2 uncharacterized protein LOC105435780 [Cucumis sativus]3.49e-156100Show/hide
Query:  MKLKIKVENQMANTLPLRKPSSWCIVLTFFLLCLGFWGFRFFSSFLFTSIALIMSMLYFSISKRNSLPIRKFVQEEEEEEEEEDQKQLTFFSDHLKSSSA
        MKLKIKVENQMANTLPLRKPSSWCIVLTFFLLCLGFWGFRFFSSFLFTSIALIMSMLYFSISKRNSLPIRKFVQEEEEEEEEEDQKQLTFFSDHLKSSSA
Subjt:  MKLKIKVENQMANTLPLRKPSSWCIVLTFFLLCLGFWGFRFFSSFLFTSIALIMSMLYFSISKRNSLPIRKFVQEEEEEEEEEDQKQLTFFSDHLKSSSA

Query:  SAPTIEDLLSESECADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDDISFRYQKLTDFQRKNLVEVL
        SAPTIEDLLSESECADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDDISFRYQKLTDFQRKNLVEVL
Subjt:  SAPTIEDLLSESECADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDDISFRYQKLTDFQRKNLVEVL

Query:  AEINDINEEENLIEIDISMGSIKYSRFEIEA
        AEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  AEINDINEEENLIEIDISMGSIKYSRFEIEA

XP_038902685.1 uncharacterized protein LOC120089322 [Benincasa hispida]1.03e-12387.84Show/hide
Query:  MANTLPLRKPSSWCIVLTFFLLCLGFWGFRFFSSFLFTSIALIMSMLYFSISKRNSLPIRKFVQEEEEEEEEEDQKQLTFFSDHLKSSSASAPTIEDLLS
        MA TLPLR P SW I LTFFLLCLGF GFR FSSFL TSIALIMSMLYFSISKRNSLPI+KFVQ+ +EEEEEEDQK+LTFFSDHLKSSS SAPT  DLLS
Subjt:  MANTLPLRKPSSWCIVLTFFLLCLGFWGFRFFSSFLFTSIALIMSMLYFSISKRNSLPIRKFVQEEEEEEEEEDQKQLTFFSDHLKSSSASAPTIEDLLS

Query:  ESECADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVD-EDEDDISFRYQKLTDFQRKNLVEVLAEINDINEE
        ESECADDNFTTTEESEVEWPYFDHR  K  NP RSDDGSISDEESLIEIALPTGHYVS KFDDVD EDED +SFRYQKL+DFQ+KNLVEVLAEINDINEE
Subjt:  ESECADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVD-EDEDDISFRYQKLTDFQRKNLVEVLAEINDINEE

Query:  ENLIEIDISMGSIKYSRFEIEA
        ENLIEIDISMGSIKYSRFEIEA
Subjt:  ENLIEIDISMGSIKYSRFEIEA

TrEMBL top hitse value%identityAlignment
A0A0A0KCP7 Uncharacterized protein1.26e-11398.31Show/hide
Query:  MSMLYFSISKRNSLPIRKFVQEEEEEEEEEDQKQLTFFSDHLKSSSASAPTIEDLLSESECADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDE
        MSMLYFSISKRNSLPIRKFVQEEEEEE   DQKQLTFFSDHLKSSSASAPTIEDLLSESECADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDE
Subjt:  MSMLYFSISKRNSLPIRKFVQEEEEEEEEEDQKQLTFFSDHLKSSSASAPTIEDLLSESECADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDE

Query:  ESLIEIALPTGHYVSRKFDDVDEDEDDISFRYQKLTDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        ESLIEIALPTGHYVSRKFDDVDEDEDDISFRYQKLTDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  ESLIEIALPTGHYVSRKFDDVDEDEDDISFRYQKLTDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

A0A1S3CMD0 uncharacterized protein LOC1035021111.62e-13690.56Show/hide
Query:  MKLKIKVENQMANTLPLRKPSSWCIVLTFFLLCLGFWGFRFFSSFLFTSIALIMSMLYFSISKRNSLPIRKFVQEEEEEEEEEDQKQLTFFSDHLKSSSA
        MKLKIKVENQMANT PLRKP SW +VLTFFL CLGF GFRFFSSFLFTSIALIMSMLYFSISKR+SLPI+KFVQE+EEEEEE DQK+LTFFSDHLKSSSA
Subjt:  MKLKIKVENQMANTLPLRKPSSWCIVLTFFLLCLGFWGFRFFSSFLFTSIALIMSMLYFSISKRNSLPIRKFVQEEEEEEEEEDQKQLTFFSDHLKSSSA

Query:  SAPTIEDLLSESECADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDED--DISFRYQKLTDFQRKNLVE
        SAPT  DLLSESECADDNFTTTEESEVEWPYFDHRF K R+PHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDED  D  FRYQKL+DFQ+KNLVE
Subjt:  SAPTIEDLLSESECADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDED--DISFRYQKLTDFQRKNLVE

Query:  VLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        VLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  VLAEINDINEEENLIEIDISMGSIKYSRFEIEA

A0A5A7UY43 Uncharacterized protein3.60e-10489.25Show/hide
Query:  MSMLYFSISKRNSLPIRKFVQE------EEEEEEEEDQKQLTFFSDHLKSSSASAPTIEDLLSESECADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDD
        MSMLYFSISKR+SLPI+KFVQE      EEEEEEEEDQK+LTFFSDHLKSSSASAPT  DLLSESECADDNFTTTEESEVEWPYFDHRF K R+PHRSDD
Subjt:  MSMLYFSISKRNSLPIRKFVQE------EEEEEEEEDQKQLTFFSDHLKSSSASAPTIEDLLSESECADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDD

Query:  GSISDEESLIEIALPTGHYVSRKFDDVDEDED--DISFRYQKLTDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        GSISDEESLIEIALPTGHYVSRKFDDVDEDED  D  FRYQKL+DFQ+KNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  GSISDEESLIEIALPTGHYVSRKFDDVDEDED--DISFRYQKLTDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

A0A5D3CJH9 Uncharacterized protein5.70e-10491.11Show/hide
Query:  MSMLYFSISKRNSLPIRKFVQEEEEEEEEEDQKQLTFFSDHLKSSSASAPTIEDLLSESECADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDE
        MSMLYFSISKR+SLPI+KFVQE+EEEEEE DQK+LTFFSDHLKSSSASAPT  DLLSESECADDNFTTTEESEVEWPYFDHRF K R+PHRSDDGSISDE
Subjt:  MSMLYFSISKRNSLPIRKFVQEEEEEEEEEDQKQLTFFSDHLKSSSASAPTIEDLLSESECADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDE

Query:  ESLIEIALPTGHYVSRKFDDVDEDED--DISFRYQKLTDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        ESLIEIALPTGHYVSRKFDDVDEDED  D  FRYQKL+DFQ+KNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  ESLIEIALPTGHYVSRKFDDVDEDED--DISFRYQKLTDFQRKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

A0A6J1CG35 uncharacterized protein LOC1110112038.44e-9273.33Show/hide
Query:  MKLKIKVENQMANTLPLRKPSSWCIVLTFFLLCLGFWGFRFFSSFLFTSIALIMSMLYFSISKRNSLPI------RKFVQEEEEEEEEEDQKQLTFFSDH
        MKLKI+VE+QMA T PLR P SW  V +F LLCLGF G RF S+F  TS  LIMSMLYF+ISKRNSLPI       KFV+EEEEE E E    ++F SD 
Subjt:  MKLKIKVENQMANTLPLRKPSSWCIVLTFFLLCLGFWGFRFFSSFLFTSIALIMSMLYFSISKRNSLPI------RKFVQEEEEEEEEEDQKQLTFFSDH

Query:  LKSSSASAPTIEDLLSESECADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYVSRKFDD--VDEDEDDISFRYQKLTDFQ
         K SSASAPT  DLLSESECADDNFTTTEESEVEWP+ D       NP RS DGSISDEESLIEIALPTGHYVS KFDD   DEDEDD+SF  QKL+DFQ
Subjt:  LKSSSASAPTIEDLLSESECADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYVSRKFDD--VDEDEDDISFRYQKLTDFQ

Query:  R-KNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        + KNLVE+LAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  R-KNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G04480.1 unknown protein7.5e-1533.95Show/hide
Query:  LRKPSSWCIVLTFFLLCLGFWGFRFFSSFLFTSIALIMSMLYFSISKRNSLPIRKFVQEEEEEEEEEDQKQLTFFSDHLKSSSASAPTIEDLLSESECAD
        L++P SW  +L   LL +   G RF    L T  AL  S  +F IS  +S      +Q  ++++++E     T                +D+  +SE   
Subjt:  LRKPSSWCIVLTFFLLCLGFWGFRFFSSFLFTSIALIMSMLYFSISKRNSLPIRKFVQEEEEEEEEEDQKQLTFFSDHLKSSSASAPTIEDLLSESECAD

Query:  DNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDDISFRYQKLTDFQRKNLVEVLAEINDINEEENLIEID
        +N   T E +                   DDG+I D+ESLIE++LP+GHY+   ++       +  + + K+ DF+   L ++L EIND  EE+NLIEID
Subjt:  DNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDDISFRYQKLTDFQRKNLVEVLAEINDINEEENLIEID

Query:  ISMGSIKYSRFEIEA
        IS+GSIKYSRFEI+A
Subjt:  ISMGSIKYSRFEIEA

AT5G35870.1 unknown protein3.9e-1129.95Show/hide
Query:  LPLRKPSSWCIVLTFFLLCLGFWGFRFFSSFLFTSIALIMSMLYFSISKRNSLPIRKFVQEEEEEEEEEDQKQLTFFSDHLKSSSASAPTIEDLLSESEC
        L  ++P SW   L   LL +   G   FS  + TS AL  S  +F +S          +Q+   + ++  Q+      D+L  +  S+ T  D++  ++ 
Subjt:  LPLRKPSSWCIVLTFFLLCLGFWGFRFFSSFLFTSIALIMSMLYFSISKRNSLPIRKFVQEEEEEEEEEDQKQLTFFSDHLKSSSASAPTIEDLLSESEC

Query:  ADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDDISFRYQKLTDFQRKNLVEVLAEINDINEEENLIE
                                       DDG+I DEESLIE++LP+GHY+   +  +   +D     Y  + DF+   L+++ AE     E++NLIE
Subjt:  ADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDDISFRYQKLTDFQRKNLVEVLAEINDINEEENLIE

Query:  IDISMGSIKYSRFEIEA
        IDIS+GSIK SRF+I+A
Subjt:  IDISMGSIKYSRFEIEA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTGAAAATCAAAGTTGAGAATCAAATGGCCAATACACTTCCTTTGAGAAAACCATCATCATGGTGTATTGTTCTAACTTTTTTTCTCCTCTGTTTGGGTTTTTG
GGGGTTTAGGTTCTTCTCCTCTTTTTTATTTACTTCCATAGCTCTGATTATGTCCATGCTTTATTTCTCAATCTCCAAAAGGAACTCACTACCTATTCGGAAATTTGTAC
AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATCAGAAACAACTGACCTTTTTTTCTGATCACTTGAAATCGTCGTCGGCGTCAGCTCCAACGATCGAAGACTTGCTGTCG
GAAAGTGAATGTGCCGATGATAATTTCACGACCACCGAGGAATCTGAAGTGGAGTGGCCGTATTTTGACCATCGGTTCAATAAAACCAGAAACCCGCACCGGTCTGATGA
CGGTTCGATTTCCGACGAGGAAAGTTTGATTGAAATCGCTCTCCCGACTGGACATTACGTCAGCCGTAAGTTTGATGACGTCGACGAGGACGAGGACGACATATCGTTTC
GTTACCAGAAACTGACGGATTTTCAAAGGAAGAATCTTGTGGAGGTGTTGGCTGAAATTAACGACATCAATGAGGAGGAAAATTTGATCGAAATCGACATATCAATGGGC
TCCATTAAATATTCAAGGTTCGAAATTGAAGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTGAAAATCAAAGTTGAGAATCAAATGGCCAATACACTTCCTTTGAGAAAACCATCATCATGGTGTATTGTTCTAACTTTTTTTCTCCTCTGTTTGGGTTTTTG
GGGGTTTAGGTTCTTCTCCTCTTTTTTATTTACTTCCATAGCTCTGATTATGTCCATGCTTTATTTCTCAATCTCCAAAAGGAACTCACTACCTATTCGGAAATTTGTAC
AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATCAGAAACAACTGACCTTTTTTTCTGATCACTTGAAATCGTCGTCGGCGTCAGCTCCAACGATCGAAGACTTGCTGTCG
GAAAGTGAATGTGCCGATGATAATTTCACGACCACCGAGGAATCTGAAGTGGAGTGGCCGTATTTTGACCATCGGTTCAATAAAACCAGAAACCCGCACCGGTCTGATGA
CGGTTCGATTTCCGACGAGGAAAGTTTGATTGAAATCGCTCTCCCGACTGGACATTACGTCAGCCGTAAGTTTGATGACGTCGACGAGGACGAGGACGACATATCGTTTC
GTTACCAGAAACTGACGGATTTTCAAAGGAAGAATCTTGTGGAGGTGTTGGCTGAAATTAACGACATCAATGAGGAGGAAAATTTGATCGAAATCGACATATCAATGGGC
TCCATTAAATATTCAAGGTTCGAAATTGAAGCTTAA
Protein sequenceShow/hide protein sequence
MKLKIKVENQMANTLPLRKPSSWCIVLTFFLLCLGFWGFRFFSSFLFTSIALIMSMLYFSISKRNSLPIRKFVQEEEEEEEEEDQKQLTFFSDHLKSSSASAPTIEDLLS
ESECADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDDISFRYQKLTDFQRKNLVEVLAEINDINEEENLIEIDISMG
SIKYSRFEIEA