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CsGy6G009705 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy6G009705
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionU11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X1
Genome locationGy14Chr6:8197820..8198026
RNA-Seq ExpressionCsGy6G009705
SyntenyCsGy6G009705
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047824.1 U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X1 [Cucumis melo var. makuwa]5.76e-0976.92Show/hide
Query:  FLGVIVEMLKKYGMSSAKPCSTPMALPPPSNVGDPCTVE
        FL V VE LKKYGMSSAKPCSTPMAL PP +VGD C++E
Subjt:  FLGVIVEMLKKYGMSSAKPCSTPMALPPPSNVGDPCTVE

KAE8646821.1 hypothetical protein Csa_004854 [Cucumis sativus]3.26e-40100Show/hide
Query:  MTNLGNFRFFLGLEIQYISKGLNVLQSLVFLGVIVEMLKKYGMSSAKPCSTPMALPPPSNVGDPCTVE
        MTNLGNFRFFLGLEIQYISKGLNVLQSLVFLGVIVEMLKKYGMSSAKPCSTPMALPPPSNVGDPCTVE
Subjt:  MTNLGNFRFFLGLEIQYISKGLNVLQSLVFLGVIVEMLKKYGMSSAKPCSTPMALPPPSNVGDPCTVE

TYK14622.1 U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X1 [Cucumis melo var. makuwa]4.21e-0976.92Show/hide
Query:  FLGVIVEMLKKYGMSSAKPCSTPMALPPPSNVGDPCTVE
        FL V VE LKKYGMSSAKPCSTPMAL PP +VGD C++E
Subjt:  FLGVIVEMLKKYGMSSAKPCSTPMALPPPSNVGDPCTVE

XP_022152156.1 uncharacterized protein LOC111019945 [Momordica charantia]1.79e-1051.47Show/hide
Query:  MTNLGNFRFFLGLEIQYISKGLNVLQSLVFLGVIVEMLKKYGMSSAKPCSTPMALPPPSNVGDPCTVE
        MT+LGN  +FLGLEI Y S G+ V Q+        ++LK++GM SAKPCSTP+AL   S++G+PC+ E
Subjt:  MTNLGNFRFFLGLEIQYISKGLNVLQSLVFLGVIVEMLKKYGMSSAKPCSTPMALPPPSNVGDPCTVE

XP_022154318.1 uncharacterized protein LOC111021613 [Momordica charantia]1.85e-0847.06Show/hide
Query:  MTNLGNFRFFLGLEIQYISKGLNVLQSLVFLGVIVEMLKKYGMSSAKPCSTPMALPPPSNVGDPCTVE
        MT+LG  R+FLGLE+ + S G+ V Q+     V++    ++GM ++KPC T +AL  PS+VG PCTVE
Subjt:  MTNLGNFRFFLGLEIQYISKGLNVLQSLVFLGVIVEMLKKYGMSSAKPCSTPMALPPPSNVGDPCTVE

TrEMBL top hitse value%identityAlignment
A0A5A7TXT1 U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X12.79e-0976.92Show/hide
Query:  FLGVIVEMLKKYGMSSAKPCSTPMALPPPSNVGDPCTVE
        FL V VE LKKYGMSSAKPCSTPMAL PP +VGD C++E
Subjt:  FLGVIVEMLKKYGMSSAKPCSTPMALPPPSNVGDPCTVE

A0A5D3CT62 U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X12.04e-0976.92Show/hide
Query:  FLGVIVEMLKKYGMSSAKPCSTPMALPPPSNVGDPCTVE
        FL V VE LKKYGMSSAKPCSTPMAL PP +VGD C++E
Subjt:  FLGVIVEMLKKYGMSSAKPCSTPMALPPPSNVGDPCTVE

A0A6J1CPG5 uncharacterized protein LOC1110133651.31e-0841.18Show/hide
Query:  MTNLGNFRFFLGLEIQYISKGLNVLQSLVFLGVIVEMLKKYGMSSAKPCSTPMALPPPSNVGDPCTVE
        MT+L + ++FLGLEI Y + GL++ Q+        ++L+++G+ SAKPC+TPM+L   +++G PC++E
Subjt:  MTNLGNFRFFLGLEIQYISKGLNVLQSLVFLGVIVEMLKKYGMSSAKPCSTPMALPPPSNVGDPCTVE

A0A6J1DGS4 uncharacterized protein LOC1110199458.65e-1151.47Show/hide
Query:  MTNLGNFRFFLGLEIQYISKGLNVLQSLVFLGVIVEMLKKYGMSSAKPCSTPMALPPPSNVGDPCTVE
        MT+LGN  +FLGLEI Y S G+ V Q+        ++LK++GM SAKPCSTP+AL   S++G+PC+ E
Subjt:  MTNLGNFRFFLGLEIQYISKGLNVLQSLVFLGVIVEMLKKYGMSSAKPCSTPMALPPPSNVGDPCTVE

A0A6J1DK06 uncharacterized protein LOC1110216138.94e-0947.06Show/hide
Query:  MTNLGNFRFFLGLEIQYISKGLNVLQSLVFLGVIVEMLKKYGMSSAKPCSTPMALPPPSNVGDPCTVE
        MT+LG  R+FLGLE+ + S G+ V Q+     V++    ++GM ++KPC T +AL  PS+VG PCTVE
Subjt:  MTNLGNFRFFLGLEIQYISKGLNVLQSLVFLGVIVEMLKKYGMSSAKPCSTPMALPPPSNVGDPCTVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAATCTTGGCAACTTCCGATTCTTCCTTGGCCTAGAAATTCAGTACATCTCAAAAGGCTTGAATGTACTGCAGAGTTTGGTTTTTTTGGGGGTGATAGTGGAAAT
GTTGAAGAAGTATGGAATGTCAAGCGCAAAGCCTTGCTCTACACCTATGGCTCTTCCTCCACCCTCTAATGTTGGTGACCCATGCACTGTTGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGACTAATCTTGGCAACTTCCGATTCTTCCTTGGCCTAGAAATTCAGTACATCTCAAAAGGCTTGAATGTACTGCAGAGTTTGGTTTTTTTGGGGGTGATAGTGGAAAT
GTTGAAGAAGTATGGAATGTCAAGCGCAAAGCCTTGCTCTACACCTATGGCTCTTCCTCCACCCTCTAATGTTGGTGACCCATGCACTGTTGAATAG
Protein sequenceShow/hide protein sequence
MTNLGNFRFFLGLEIQYISKGLNVLQSLVFLGVIVEMLKKYGMSSAKPCSTPMALPPPSNVGDPCTVE