CuGenDBv2

Gene ID	CsGy6G012060
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Cyclin-dependent kinases regulatory subunit
Genome location	Gy14Chr6:10493139..10493944
RNA-Seq Expression	CsGy6G012060
Synteny	CsGy6G012060
Gene Ontology terms	GO:0007346 - regulation of mitotic cell cycle (biological process) GO:0045737 - positive regulation of cyclin-dependent protein serine/threonine kinase activity (biological process) GO:0051301 - cell division (biological process) GO:0000307 - cyclin-dependent protein kinase holoenzyme complex (cellular component) GO:0019005 - SCF ubiquitin ligase complex (cellular component) GO:0016301 - kinase activity (molecular function) GO:0019901 - protein kinase binding (molecular function) GO:0042393 - histone binding (molecular function) GO:0043130 - ubiquitin binding (molecular function) GO:0061575 - cyclin-dependent protein serine/threonine kinase activator activity (molecular function)
InterPro domains	IPR000789 - Cyclin-dependent kinase, regulatory subunit IPR036858 - Cyclin-dependent kinase, regulatory subunit superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KGN46891.1 hypothetical protein Csa_021096 [Cucumis sativus]

2.49e-56

100

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Query:  MSNWIDWCRHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQENRTQQNALAAK
        MSNWIDWCRHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQENRTQQNALAAK
Subjt:  MSNWIDWCRHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQENRTQQNALAAK

XP_008465423.1 PREDICTED: cyclin-dependent kinases regulatory subunit 1-like [Cucumis melo]

1.52e-43

95.83

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Query:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQENRTQQNALAAK
        RHVVLPPEVAKL PKNRLLSENEWRAIGVQQSRGWVHYA H PEPHIMLFRRPLNYQQQQENRTQQNALAAK
Subjt:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQENRTQQNALAAK

XP_011657043.1 LOW QUALITY PROTEIN: cyclin-dependent kinases regulatory subunit 1 [Cucumis sativus]

3.30e-47

100

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Query:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQENRTQQNALAAK
        RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQENRTQQNALAAK
Subjt:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQENRTQQNALAAK

XP_018854502.1 cyclin-dependent kinases regulatory subunit 1-like [Juglans regia]

5.77e-41

92.86

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Query:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQENRTQQNALA
        RHVVLPPEVAKL PKNRLLSENEWRAIGVQQSRGWVHYA H PEPHIMLFRRPLNYQQQQEN+TQQN LA
Subjt:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQENRTQQNALA

XP_038902899.1 cyclin-dependent kinases regulatory subunit 1-like [Benincasa hispida]

4.18e-41

91.67

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Query:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQENRTQQNALAAK
        RHVVLPPEVAKL PKNRLLSENEWRAIGVQQSRGWVHYA H PEPHIMLFRRPLNYQQQQEN  QQN LAAK
Subjt:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQENRTQQNALAAK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KGK5 Cyclin-dependent kinases regulatory subunit

1.21e-56

100

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Query:  MSNWIDWCRHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQENRTQQNALAAK
        MSNWIDWCRHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQENRTQQNALAAK
Subjt:  MSNWIDWCRHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQENRTQQNALAAK

A0A1S3CNU7 Cyclin-dependent kinases regulatory subunit

7.34e-44

95.83

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Query:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQENRTQQNALAAK
        RHVVLPPEVAKL PKNRLLSENEWRAIGVQQSRGWVHYA H PEPHIMLFRRPLNYQQQQENRTQQNALAAK
Subjt:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQENRTQQNALAAK

A0A2I4GKZ4 Cyclin-dependent kinases regulatory subunit

2.79e-41

92.86

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Query:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQENRTQQNALA
        RHVVLPPEVAKL PKNRLLSENEWRAIGVQQSRGWVHYA H PEPHIMLFRRPLNYQQQQEN+TQQN LA
Subjt:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQENRTQQNALA

A0A5D3DKQ6 Cyclin-dependent kinases regulatory subunit

7.34e-44

95.83

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Query:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQENRTQQNALAAK
        RHVVLPPEVAKL PKNRLLSENEWRAIGVQQSRGWVHYA H PEPHIMLFRRPLNYQQQQENRTQQNALAAK
Subjt:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQENRTQQNALAAK

A0A6J1K8L9 Cyclin-dependent kinases regulatory subunit

5.81e-41

90.28

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Query:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQENRTQQNALAAK
        RHVVLPP+VAKL PKNRLLSENEWRAIGVQQSRGWVHYA H PEPHIMLFRRPLNYQQQQEN  QQN LAAK
Subjt:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQENRTQQNALAAK

SwissProt top hits

e value

%identity

Alignment

A2XCH8 Cyclin-dependent kinases regulatory subunit 1

1.5e-28

93.44

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Query:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQE
        RHVVLPPEVAKL PKNRLLSENEWRAIGVQQSRGWVHYA H PEPHIMLFRRPLN+QQQQE
Subjt:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQE

O23249 Cyclin-dependent kinases regulatory subunit 1

3.7e-30

92.31

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Query:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQENRTQ
        RHVVLPPEVAKL PKNRLLSENEWRAIGVQQSRGWVHYA H PEPHIMLFRRPLNYQQQQEN+ Q
Subjt:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQENRTQ

P55933 Probable cyclin-dependent kinases regulatory subunit

3.4e-20

78.85

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Query:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRR
        RHV+LPP+VAK  PKNRLLSE EWR +GVQQS+GWVHYA H PEPHI+LFRR
Subjt:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRR

Q6PS57 Cyclin-dependent kinases regulatory subunit 1

1.5e-28

93.44

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Query:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQE
        RHVVLPPEVAKL PKNRLLSENEWRAIGVQQSRGWVHYA H PEPHIMLFRRPLN+QQQQE
Subjt:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQE

Q9SJJ5 Cyclin-dependent kinases regulatory subunit 2

6.5e-27

86.89

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Query:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQE
        RHVVLPPEVAKL PKNR+LSE+EWRAIGVQQSRGWVHYA H PEPHIMLFRRPLNYQQ+ +
Subjt:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQE

Arabidopsis top hits

e value

%identity

Alignment

AT2G27960.1 cyclin-dependent kinase-subunit 1

2.6e-31

92.31

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Query:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQENRTQ
        RHVVLPPEVAKL PKNRLLSENEWRAIGVQQSRGWVHYA H PEPHIMLFRRPLNYQQQQEN+ Q
Subjt:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQENRTQ

AT2G27970.1 CDK-subunit 2

4.6e-28

86.89

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Query:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQE
        RHVVLPPEVAKL PKNR+LSE+EWRAIGVQQSRGWVHYA H PEPHIMLFRRPLNYQQ+ +
Subjt:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQE

Sequences

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CDS sequence

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ATGTCTAATTGGATTGATTGGTGCAGACACGTGGTTCTCCCACCCGAAGTGGCAAAGTTGTTTCCTAAGAATCGTCTGCTCTCGGAAAATGAATGGCGTGCAATTGGAGT
CCAGCAGAGTCGTGGGTGGGTGCACTATGCTTTTCATTGTCCCGAACCTCATATCATGCTATTCAGGAGGCCCCTGAACTACCAACAGCAACAGGAGAATCGCACTCAAC
AAAATGCACTTGCTGCTAAATGA

mRNA sequence

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Protein sequence

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MSNWIDWCRHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHCPEPHIMLFRRPLNYQQQQENRTQQNALAAK

CsGy6G012060 (gene) of Cucumber (Gy14) v2.1 genome