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CsGy6G012100 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy6G012100
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionRING-H2 finger protein ATL57-like
Genome locationGy14Chr6:10527095..10527799
RNA-Seq ExpressionCsGy6G012100
SyntenyCsGy6G012100
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN46895.1 hypothetical protein Csa_020764 [Cucumis sativus]3.47e-133100Show/hide
Query:  MKPQFCHRKLLLEASDYMNLPSPDRPLEVETTTQNSSSSHSFKFSQLFPPFNLKTAFILLILLLLFFLFTIFSIYIRRFAERRYPFPPPPLLRPPHTASS
        MKPQFCHRKLLLEASDYMNLPSPDRPLEVETTTQNSSSSHSFKFSQLFPPFNLKTAFILLILLLLFFLFTIFSIYIRRFAERRYPFPPPPLLRPPHTASS
Subjt:  MKPQFCHRKLLLEASDYMNLPSPDRPLEVETTTQNSSSSHSFKFSQLFPPFNLKTAFILLILLLLFFLFTIFSIYIRRFAERRYPFPPPPLLRPPHTASS

Query:  SSANGVDRAVVRSLPVFAYRCDDKLQVDCPICLSEFEAEEKVAVLTRVLPRLPVDGIERDGVRRKMGGGGDTWLKEDKLCWERFLGKKR
        SSANGVDRAVVRSLPVFAYRCDDKLQVDCPICLSEFEAEEKVAVLTRVLPRLPVDGIERDGVRRKMGGGGDTWLKEDKLCWERFLGKKR
Subjt:  SSANGVDRAVVRSLPVFAYRCDDKLQVDCPICLSEFEAEEKVAVLTRVLPRLPVDGIERDGVRRKMGGGGDTWLKEDKLCWERFLGKKR

MBA0622695.1 hypothetical protein [Gossypium davidsonii]4.06e-1435.9Show/hide
Query:  MKPQFCHRKLLLEA-SDYMNLPSPDRPLEVETTTQNSSS--SHSFKFSQLFPPFNLKTAFILLILLLLFFLFTIFSIYIRRFAE---------RRY---P
        MKP   +RKL L   S Y +  +   PL    TT  +SS  S S K     PPF+   A   ++LL + F    FSI+IRRF+E         RRY   P
Subjt:  MKPQFCHRKLLLEA-SDYMNLPSPDRPLEVETTTQNSSS--SHSFKFSQLFPPFNLKTAFILLILLLLFFLFTIFSIYIRRFAE---------RRY---P

Query:  FPPPPLLRPPHTASSSSANGVDRAVVRSLPVFAYRCDDKLQVDCPICLSEFEAEEKVAVLTRVLPRLPVDGIERDGVRRKMGGGGDTWLKEDKLC
          P P     H  S+S   G+D   +RSLPV++YR + K Q+DCPICLSEFE  + +  +        V+ I             DTWL  +  C
Subjt:  FPPPPLLRPPHTASSSSANGVDRAVVRSLPVFAYRCDDKLQVDCPICLSEFEAEEKVAVLTRVLPRLPVDGIERDGVRRKMGGGGDTWLKEDKLC

TYI80507.1 hypothetical protein E1A91_D05G092000v1 [Gossypium mustelinum]5.64e-1435.9Show/hide
Query:  MKPQFCHRKLLLEA-SDYMNLPSPDRPLEVETTTQNSSS--SHSFKFSQLFPPFNLKTAFILLILLLLFFLFTIFSIYIRRFAE---------RRY---P
        MKP   +RKL L   S Y +  +   PL    TT  +SS  S S K     PPF+   A   ++LL + F    FSI+IRRF+E         RRY   P
Subjt:  MKPQFCHRKLLLEA-SDYMNLPSPDRPLEVETTTQNSSS--SHSFKFSQLFPPFNLKTAFILLILLLLFFLFTIFSIYIRRFAE---------RRY---P

Query:  FPPPPLLRPPHTASSSSANGVDRAVVRSLPVFAYRCDDKLQVDCPICLSEFEAEEKVAVLTRVLPRLPVDGIERDGVRRKMGGGGDTWLKEDKLC
          P P     H  S+S   G+D   +RSLPV++YR + K Q+DCPICLSEFE  + +  +        V+ I             DTWL     C
Subjt:  FPPPPLLRPPHTASSSSANGVDRAVVRSLPVFAYRCDDKLQVDCPICLSEFEAEEKVAVLTRVLPRLPVDGIERDGVRRKMGGGGDTWLKEDKLC

XP_016903383.1 PREDICTED: RING-H2 finger protein ATL57-like [Cucumis melo]2.39e-7886.9Show/hide
Query:  MKPQFCHRKLLLEASDYMNLPSPDRPLEVETTTQNSSSSHSFKFSQLFPPFNLKTAFILLILLLLFFLFTIFSIYIRRFAERRYPFPPPPLLRPPHTASS
        MKPQF HRKLLLEASDY+NLPSPD PLEVETTTQN SSS SFKFSQLFPPFNLKTAFILL LLLLFFLFTIFSIYIRRFAERRYPFPPPPL RPPHTA++
Subjt:  MKPQFCHRKLLLEASDYMNLPSPDRPLEVETTTQNSSSSHSFKFSQLFPPFNLKTAFILLILLLLFFLFTIFSIYIRRFAERRYPFPPPPLLRPPHTASS

Query:  SSANGVDRAVVRSLPVFAYRCDDKLQVDCPICLSEFEAEEKVAVL
        SSANG+DR VV SLPV +YRCDDKLQVDCPICLSEFEA E+V  +
Subjt:  SSANGVDRAVVRSLPVFAYRCDDKLQVDCPICLSEFEAEEKVAVL

XP_022729082.1 RING-H2 finger protein ATL57-like [Durio zibethinus]3.99e-1436.04Show/hide
Query:  MKPQFCHRKLLLEASDYMNLPSPDRPLEVETTTQNSSSSH---SFKFSQLFP--PFNLKTAFILLILLLLFFLFTIFSIYIRRFAE---------RRY--
        MKP    RKL L      +  S   P    TT  N+SSS    S + SQ+ P  PF+   A  +++LL+  F    FSIYIRRF E         RRY  
Subjt:  MKPQFCHRKLLLEASDYMNLPSPDRPLEVETTTQNSSSSH---SFKFSQLFP--PFNLKTAFILLILLLLFFLFTIFSIYIRRFAE---------RRY--

Query:  -PFPPPPLLRPPHTASSSSANGVDRAVVRSLPVFAYRCDDKLQVDCPICLSEFEAEEKVAVLTRVLPRLPVDGIERDGVRRKMGGGGDTWLKEDKLC
         PF   P    PH  S+S   G+D   +RSLPV++Y  ++K Q+DC ICLSEFE +E +  +        V+ I             DTWL     C
Subjt:  -PFPPPPLLRPPHTASSSSANGVDRAVVRSLPVFAYRCDDKLQVDCPICLSEFEAEEKVAVLTRVLPRLPVDGIERDGVRRKMGGGGDTWLKEDKLC

TrEMBL top hitse value%identityAlignment
A0A0A0KAY2 Uncharacterized protein1.68e-133100Show/hide
Query:  MKPQFCHRKLLLEASDYMNLPSPDRPLEVETTTQNSSSSHSFKFSQLFPPFNLKTAFILLILLLLFFLFTIFSIYIRRFAERRYPFPPPPLLRPPHTASS
        MKPQFCHRKLLLEASDYMNLPSPDRPLEVETTTQNSSSSHSFKFSQLFPPFNLKTAFILLILLLLFFLFTIFSIYIRRFAERRYPFPPPPLLRPPHTASS
Subjt:  MKPQFCHRKLLLEASDYMNLPSPDRPLEVETTTQNSSSSHSFKFSQLFPPFNLKTAFILLILLLLFFLFTIFSIYIRRFAERRYPFPPPPLLRPPHTASS

Query:  SSANGVDRAVVRSLPVFAYRCDDKLQVDCPICLSEFEAEEKVAVLTRVLPRLPVDGIERDGVRRKMGGGGDTWLKEDKLCWERFLGKKR
        SSANGVDRAVVRSLPVFAYRCDDKLQVDCPICLSEFEAEEKVAVLTRVLPRLPVDGIERDGVRRKMGGGGDTWLKEDKLCWERFLGKKR
Subjt:  SSANGVDRAVVRSLPVFAYRCDDKLQVDCPICLSEFEAEEKVAVLTRVLPRLPVDGIERDGVRRKMGGGGDTWLKEDKLCWERFLGKKR

A0A1S4E570 RING-H2 finger protein ATL57-like1.16e-7886.9Show/hide
Query:  MKPQFCHRKLLLEASDYMNLPSPDRPLEVETTTQNSSSSHSFKFSQLFPPFNLKTAFILLILLLLFFLFTIFSIYIRRFAERRYPFPPPPLLRPPHTASS
        MKPQF HRKLLLEASDY+NLPSPD PLEVETTTQN SSS SFKFSQLFPPFNLKTAFILL LLLLFFLFTIFSIYIRRFAERRYPFPPPPL RPPHTA++
Subjt:  MKPQFCHRKLLLEASDYMNLPSPDRPLEVETTTQNSSSSHSFKFSQLFPPFNLKTAFILLILLLLFFLFTIFSIYIRRFAERRYPFPPPPLLRPPHTASS

Query:  SSANGVDRAVVRSLPVFAYRCDDKLQVDCPICLSEFEAEEKVAVL
        SSANG+DR VV SLPV +YRCDDKLQVDCPICLSEFEA E+V  +
Subjt:  SSANGVDRAVVRSLPVFAYRCDDKLQVDCPICLSEFEAEEKVAVL

A0A5A7T753 RING-H2 finger protein ATL57-like1.16e-7886.9Show/hide
Query:  MKPQFCHRKLLLEASDYMNLPSPDRPLEVETTTQNSSSSHSFKFSQLFPPFNLKTAFILLILLLLFFLFTIFSIYIRRFAERRYPFPPPPLLRPPHTASS
        MKPQF HRKLLLEASDY+NLPSPD PLEVETTTQN SSS SFKFSQLFPPFNLKTAFILL LLLLFFLFTIFSIYIRRFAERRYPFPPPPL RPPHTA++
Subjt:  MKPQFCHRKLLLEASDYMNLPSPDRPLEVETTTQNSSSSHSFKFSQLFPPFNLKTAFILLILLLLFFLFTIFSIYIRRFAERRYPFPPPPLLRPPHTASS

Query:  SSANGVDRAVVRSLPVFAYRCDDKLQVDCPICLSEFEAEEKVAVL
        SSANG+DR VV SLPV +YRCDDKLQVDCPICLSEFEA E+V  +
Subjt:  SSANGVDRAVVRSLPVFAYRCDDKLQVDCPICLSEFEAEEKVAVL

A0A6P5XMH6 RING-H2 finger protein ATL57-like1.93e-1436.04Show/hide
Query:  MKPQFCHRKLLLEASDYMNLPSPDRPLEVETTTQNSSSSH---SFKFSQLFP--PFNLKTAFILLILLLLFFLFTIFSIYIRRFAE---------RRY--
        MKP    RKL L      +  S   P    TT  N+SSS    S + SQ+ P  PF+   A  +++LL+  F    FSIYIRRF E         RRY  
Subjt:  MKPQFCHRKLLLEASDYMNLPSPDRPLEVETTTQNSSSSH---SFKFSQLFP--PFNLKTAFILLILLLLFFLFTIFSIYIRRFAE---------RRY--

Query:  -PFPPPPLLRPPHTASSSSANGVDRAVVRSLPVFAYRCDDKLQVDCPICLSEFEAEEKVAVLTRVLPRLPVDGIERDGVRRKMGGGGDTWLKEDKLC
         PF   P    PH  S+S   G+D   +RSLPV++Y  ++K Q+DC ICLSEFE +E +  +        V+ I             DTWL     C
Subjt:  -PFPPPPLLRPPHTASSSSANGVDRAVVRSLPVFAYRCDDKLQVDCPICLSEFEAEEKVAVLTRVLPRLPVDGIERDGVRRKMGGGGDTWLKEDKLC

A0A7J8S9V3 RING-type domain-containing protein1.96e-1435.9Show/hide
Query:  MKPQFCHRKLLLEA-SDYMNLPSPDRPLEVETTTQNSSS--SHSFKFSQLFPPFNLKTAFILLILLLLFFLFTIFSIYIRRFAE---------RRY---P
        MKP   +RKL L   S Y +  +   PL    TT  +SS  S S K     PPF+   A   ++LL + F    FSI+IRRF+E         RRY   P
Subjt:  MKPQFCHRKLLLEA-SDYMNLPSPDRPLEVETTTQNSSS--SHSFKFSQLFPPFNLKTAFILLILLLLFFLFTIFSIYIRRFAE---------RRY---P

Query:  FPPPPLLRPPHTASSSSANGVDRAVVRSLPVFAYRCDDKLQVDCPICLSEFEAEEKVAVLTRVLPRLPVDGIERDGVRRKMGGGGDTWLKEDKLC
          P P     H  S+S   G+D   +RSLPV++YR + K Q+DCPICLSEFE  + +  +        V+ I             DTWL  +  C
Subjt:  FPPPPLLRPPHTASSSSANGVDRAVVRSLPVFAYRCDDKLQVDCPICLSEFEAEEKVAVLTRVLPRLPVDGIERDGVRRKMGGGGDTWLKEDKLC

SwissProt top hitse value%identityAlignment
Q8W571 RING-H2 finger protein ATL327.3e-0531.52Show/hide
Query:  LEVETTTQNSSSSHSFKFSQLFPPFNLKTAF------ILLILLLLFFLFTIFSIYIRRFAERRYPFPPPPLLRPPHTASSSSANGVDRAVVRSLPVFAYR
        L V    Q+ +++ SF  S    P +L+T        +  +L+ LFFL  + S+YIR  A R  P       R      SS   G+D AVV S PVFAY 
Subjt:  LEVETTTQNSSSSHSFKFSQLFPPFNLKTAF------ILLILLLLFFLFTIFSIYIRRFAERRYPFPPPPLLRPPHTASSSSANGVDRAVVRSLPVFAYR

Query:  C--DDKL---QVDCPICLSEFEAEEKVAVLTRVLPRLPVDGIERDGVRRKMGGGGDTWLKEDKLC
           + K+    ++C ICL+E E  E V +L        +D I             DTWL     C
Subjt:  C--DDKL---QVDCPICLSEFEAEEKVAVLTRVLPRLPVDGIERDGVRRKMGGGGDTWLKEDKLC

Q9SJJ7 RING-H2 finger protein ATL572.8e-0430.41Show/hide
Query:  EVETTTQNSSSSHSFKFSQLFPPFNLKTAFILLILLLLFFLFTI--FSIYIRRFAE--------RRYPFPPPPLLRPPHTASS-------SSANGVDRAV
        E+  T QN +SS         PP  L +   L I +LL  LF +  FS+Y R FA+           P      + P   ++S       S   G+D   
Subjt:  EVETTTQNSSSSHSFKFSQLFPPFNLKTAFILLILLLLFFLFTI--FSIYIRRFAE--------RRYPFPPPPLLRPPHTASS-------SSANGVDRAV

Query:  VRSLPVFAY-RCDDKLQVDCPICLSEFEAEEKVAVLTRVLPRLPVDGIERDGVRRKMGGGGDTWLKEDKLC
        VRSLPV+ Y +   +   DC ICLS+FE  E V V+        VD +             DTWL     C
Subjt:  VRSLPVFAY-RCDDKLQVDCPICLSEFEAEEKVAVLTRVLPRLPVDGIERDGVRRKMGGGGDTWLKEDKLC

Arabidopsis top hitse value%identityAlignment
AT1G23980.1 RING/U-box superfamily protein1.3e-0424.73Show/hide
Query:  SDYMNLPSPD---RPLEVETTTQNSSSSHSFKFSQLFPPFNLKTAFILLILLLLFFLFTIFSIYIRRFAERR---YPFPPPPLLRPPHTASSSS------
        +D +N  SP     P+ +     +SSSS S   +    P  L   FI+++L ++FF+ +I  + +R + +++       P    + P  + S +      
Subjt:  SDYMNLPSPD---RPLEVETTTQNSSSSHSFKFSQLFPPFNLKTAFILLILLLLFFLFTIFSIYIRRFAERR---YPFPPPPLLRPPHTASSSS------

Query:  ------ANGVDRAVVRSLPVFAYR--CDDKLQVDCPICLSEFEAEEKVAVLTRVLPRLPVDGIERDGVRRKMGGGGDTWLKEDKLC
               +G+D+A++ +LPVF Y+     K   DC +CL EF  ++K+ +L        +D I             DTWL  +  C
Subjt:  ------ANGVDRAVVRSLPVFAYR--CDDKLQVDCPICLSEFEAEEKVAVLTRVLPRLPVDGIERDGVRRKMGGGGDTWLKEDKLC

AT2G18650.1 RING/U-box superfamily protein9.8e-0525.97Show/hide
Query:  KLLLEASDYMNLPSPDRPLEVETTTQNSSSSHSFKFSQLFPPFNLKTAFILLILLLLFFLFTIFSIYIR------RFAERRYPFPPPPLLRPPHTASSSS
        K+L E     NL S   P  +     N+S       S L          I++IL ++FF+  +  I ++      R +   Y      L        +  
Subjt:  KLLLEASDYMNLPSPDRPLEVETTTQNSSSSHSFKFSQLFPPFNLKTAFILLILLLLFFLFTIFSIYIR------RFAERRYPFPPPPLLRPPHTASSSS

Query:  ANGVDRAVVRSLPVFAYRCDDKLQV---DCPICLSEFEAEEKVAVLTRVLPRLPVDGIERDGVRRKMGGGGDTWLKEDKLC
         +GVD++++ +LPVF Y+    L++   DCP+CL EFE E+K+ +L +      V+ I             DTWL     C
Subjt:  ANGVDRAVVRSLPVFAYRCDDKLQV---DCPICLSEFEAEEKVAVLTRVLPRLPVDGIERDGVRRKMGGGGDTWLKEDKLC

AT2G27940.1 RING/U-box superfamily protein2.0e-0530.41Show/hide
Query:  EVETTTQNSSSSHSFKFSQLFPPFNLKTAFILLILLLLFFLFTI--FSIYIRRFAE--------RRYPFPPPPLLRPPHTASS-------SSANGVDRAV
        E+  T QN +SS         PP  L +   L I +LL  LF +  FS+Y R FA+           P      + P   ++S       S   G+D   
Subjt:  EVETTTQNSSSSHSFKFSQLFPPFNLKTAFILLILLLLFFLFTI--FSIYIRRFAE--------RRYPFPPPPLLRPPHTASS-------SSANGVDRAV

Query:  VRSLPVFAY-RCDDKLQVDCPICLSEFEAEEKVAVLTRVLPRLPVDGIERDGVRRKMGGGGDTWLKEDKLC
        VRSLPV+ Y +   +   DC ICLS+FE  E V V+        VD +             DTWL     C
Subjt:  VRSLPVFAY-RCDDKLQVDCPICLSEFEAEEKVAVLTRVLPRLPVDGIERDGVRRKMGGGGDTWLKEDKLC

AT2G35420.1 RING/U-box superfamily protein1.7e-0430.25Show/hide
Query:  NSSSSHSFKFSQLFPPFNLKTAFILLILLLLFFLFTIFSIYIRRFAERRYPFPPPPLLRPP-----HTASSSSANGVDRAVVRSLPVFAYRCDDKLQ--V
        +++S  S   + +FP  ++    +L  +LL       FS+++ +F   R  F    L R P     H A+     G+D  ++RS PVF Y    K     
Subjt:  NSSSSHSFKFSQLFPPFNLKTAFILLILLLLFFLFTIFSIYIRRFAERRYPFPPPPLLRPP-----HTASSSSANGVDRAVVRSLPVFAYRCDDKLQ--V

Query:  DCPICLSEFEAEEKVAVLT
        +C ICLSEF  E+ V ++T
Subjt:  DCPICLSEFEAEEKVAVLT

AT4G40070.1 RING/U-box superfamily protein5.2e-0631.52Show/hide
Query:  LEVETTTQNSSSSHSFKFSQLFPPFNLKTAF------ILLILLLLFFLFTIFSIYIRRFAERRYPFPPPPLLRPPHTASSSSANGVDRAVVRSLPVFAYR
        L V    Q+ +++ SF  S    P +L+T        +  +L+ LFFL  + S+YIR  A R  P       R      SS   G+D AVV S PVFAY 
Subjt:  LEVETTTQNSSSSHSFKFSQLFPPFNLKTAF------ILLILLLLFFLFTIFSIYIRRFAERRYPFPPPPLLRPPHTASSSSANGVDRAVVRSLPVFAYR

Query:  C--DDKL---QVDCPICLSEFEAEEKVAVLTRVLPRLPVDGIERDGVRRKMGGGGDTWLKEDKLC
           + K+    ++C ICL+E E  E V +L        +D I             DTWL     C
Subjt:  C--DDKL---QVDCPICLSEFEAEEKVAVLTRVLPRLPVDGIERDGVRRKMGGGGDTWLKEDKLC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACCCCAATTTTGCCACCGCAAGCTCCTTCTAGAAGCTTCCGACTACATGAATCTCCCATCCCCCGACCGTCCTCTTGAAGTTGAAACCACAACCCAAAATTCATC
TTCTTCTCATTCCTTCAAATTCTCCCAATTATTCCCACCCTTCAACCTGAAAACCGCCTTCATCCTCCTCATCCTCCTCCTCCTTTTCTTTCTCTTCACCATTTTCTCCA
TCTACATCCGCCGCTTCGCCGAACGCCGCTACCCTTTTCCACCGCCGCCCCTCCTCCGGCCGCCGCATACGGCGTCGAGTTCATCCGCCAACGGTGTGGACCGGGCGGTT
GTGAGGTCGCTTCCGGTTTTTGCTTACCGTTGCGACGATAAGCTTCAAGTGGATTGTCCGATTTGTCTGAGCGAGTTTGAGGCGGAGGAGAAGGTGGCTGTTCTTACACG
TGTCCTGCCCCGTTTGCCGGTCGACGGAATTGAACGGGACGGCGTCAGGAGGAAGATGGGTGGAGGTGGGGACACGTGGCTAAAGGAGGATAAACTTTGCTGGGAAAGGT
TCCTTGGAAAGAAACGCTGA
mRNA sequenceShow/hide mRNA sequence
TCCCCTTCTCTTCTAATCCCCCGCCGTCGGTCTCTCTCCTCTCAACCTCTCATTCTCCATCTTCCGCCGCCGTACTTTCACCATGAAACCCCAATTTTGCCACCGCAAGC
TCCTTCTAGAAGCTTCCGACTACATGAATCTCCCATCCCCCGACCGTCCTCTTGAAGTTGAAACCACAACCCAAAATTCATCTTCTTCTCATTCCTTCAAATTCTCCCAA
TTATTCCCACCCTTCAACCTGAAAACCGCCTTCATCCTCCTCATCCTCCTCCTCCTTTTCTTTCTCTTCACCATTTTCTCCATCTACATCCGCCGCTTCGCCGAACGCCG
CTACCCTTTTCCACCGCCGCCCCTCCTCCGGCCGCCGCATACGGCGTCGAGTTCATCCGCCAACGGTGTGGACCGGGCGGTTGTGAGGTCGCTTCCGGTTTTTGCTTACC
GTTGCGACGATAAGCTTCAAGTGGATTGTCCGATTTGTCTGAGCGAGTTTGAGGCGGAGGAGAAGGTGGCTGTTCTTACACGTGTCCTGCCCCGTTTGCCGGTCGACGGA
ATTGAACGGGACGGCGTCAGGAGGAAGATGGGTGGAGGTGGGGACACGTGGCTAAAGGAGGATAAACTTTGCTGGGAAAGGTTCCTTGGAAAGAAACGCTGA
Protein sequenceShow/hide protein sequence
MKPQFCHRKLLLEASDYMNLPSPDRPLEVETTTQNSSSSHSFKFSQLFPPFNLKTAFILLILLLLFFLFTIFSIYIRRFAERRYPFPPPPLLRPPHTASSSSANGVDRAV
VRSLPVFAYRCDDKLQVDCPICLSEFEAEEKVAVLTRVLPRLPVDGIERDGVRRKMGGGGDTWLKEDKLCWERFLGKKR