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CsGy6G014255 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy6G014255
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description30S ribosomal protein S7, chloroplastic
Genome locationGy14Chr6:12592396..12594960
RNA-Seq ExpressionCsGy6G014255
SyntenyCsGy6G014255
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000235 - Ribosomal protein S5/S7
IPR023798 - Ribosomal protein S7 domain
IPR036823 - Ribosomal protein S7 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646966.1 hypothetical protein Csa_020846 [Cucumis sativus]4.47e-10393.63Show/hide
Query:  VSGVMRAVKLKEIRFRQIWVPSPAEFGEPLLEFGVGPYDLVGWKVDEDPGTSPWGGGGAWMGRVLALERFPGWVGYQTSHTIFVEHPNAGHDSGERDRRS
        V GV   V +K + F QIWVPSPAEFGEPLLEFGVGPYDLVGWKVDEDPGTSPWGGGGAWMGRVLALERFPGWVGYQTSHTIFVEHPNAGHDSGERDRRS
Subjt:  VSGVMRAVKLKEIRFRQIWVPSPAEFGEPLLEFGVGPYDLVGWKVDEDPGTSPWGGGGAWMGRVLALERFPGWVGYQTSHTIFVEHPNAGHDSGERDRRS

Query:  GGEIKRAKAVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQIHF
        GGEIKRAKAVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQIHF
Subjt:  GGEIKRAKAVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQIHF

QWZ46567.1 ribosomal protein S7 [Guibourtia ehie]5.96e-1787.23Show/hide
Query:  AVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQI
        AVKARRVG STHQVPIEIGSTQGKAL IRWLLG SRKR  RNMAFQ+
Subjt:  AVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQI

RZC69730.1 hypothetical protein C5167_032856 [Papaver somniferum]3.14e-1785.71Show/hide
Query:  AVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQIHF
        AVKARRVG STHQVPIEIGSTQGKAL IRWLLG SRKR  RNMAF+I F
Subjt:  AVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQIHF

YP_009766049.1 ribosomal protein S7 [Amherstia nobilis]6.25e-1787.23Show/hide
Query:  AVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQI
        AVKARRVG STHQVPIEIGSTQGKAL IRWLLG SRKR  RNMAFQ+
Subjt:  AVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQI

YP_009771869.1 ribosomal protein S7 [Baphia racemosa]4.44e-1783.67Show/hide
Query:  AVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQIHF
        AVKARRVG STHQVPIEIGSTQGKAL IRWLLG SRKR +RNMAF++ F
Subjt:  AVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQIHF

TrEMBL top hitse value%identityAlignment
A0A0D3E5Y5 Ribosomal_S7 domain-containing protein2.15e-1787.23Show/hide
Query:  AVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQI
        AVKARRVG STHQVPIEIGSTQGKAL IRWLLG SRKRL RNMAF++
Subjt:  AVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQI

A0A4Y7KBK0 Ribosomal protein S71.52e-1785.71Show/hide
Query:  AVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQIHF
        AVKARRVG STHQVPIEIGSTQGKAL IRWLLG SRKR  RNMAF+I F
Subjt:  AVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQIHF

A0A6H0E3C3 Ribosomal protein S73.03e-1787.23Show/hide
Query:  AVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQI
        AVKARRVG STHQVPIEIGSTQGKAL IRWLLG SRKR  RNMAFQ+
Subjt:  AVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQI

A0A6H0ELS5 Ribosomal protein S72.15e-1783.67Show/hide
Query:  AVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQIHF
        AVKARRVG STHQVPIEIGSTQGKAL IRWLLG SRKR +RNMAF++ F
Subjt:  AVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQIHF

A0A7N0RCK0 Ribosomal protein S71.56e-1787.23Show/hide
Query:  AVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQI
        AVKARRVGESTHQVPIEIGSTQGKAL IRWLLG SRKR  RNMAF++
Subjt:  AVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQI

SwissProt top hitse value%identityAlignment
A4QJG0 30S ribosomal protein S7, chloroplastic7.5e-1585.11Show/hide
Query:  AVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQI
        AVKARRVG STHQVPIEIGSTQGKAL IRWLLG SRKR  RNMAF++
Subjt:  AVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQI

A4QJP4 30S ribosomal protein S7, chloroplastic7.5e-1585.11Show/hide
Query:  AVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQI
        AVKARRVG STHQVPIEIGSTQGKAL IRWLLG SRKR  RNMAF++
Subjt:  AVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQI

Q67ID1 30S ribosomal protein S7, chloroplastic7.5e-1585.11Show/hide
Query:  AVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQI
        AVKARRVG STHQVPIEIGSTQGKAL IRWLLG SRKR  RNMAF++
Subjt:  AVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQI

Q67IG9 30S ribosomal protein S7, chloroplastic2.6e-1587.23Show/hide
Query:  AVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQI
        AVKARRVG STHQVPIEIGSTQGKAL IRWLLG SRKR  RNMAFQ+
Subjt:  AVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQI

Q9GE26 30S ribosomal protein S7, chloroplastic7.5e-1585.11Show/hide
Query:  AVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQI
        AVKARRVG STHQVPIEIGSTQGKAL IRWLLG SRKR  RNMAF++
Subjt:  AVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQI

Arabidopsis top hitse value%identityAlignment
ATCG00900.1 Ribosomal protein S7p/S5e family protein5.4e-1685.11Show/hide
Query:  AVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQI
        AVKARRVG STHQVPIEIGSTQGKAL IRWLLG SRKR  RNMAF++
Subjt:  AVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQI

ATCG01240.1 ribosomal protein S75.4e-1685.11Show/hide
Query:  AVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQI
        AVKARRVG STHQVPIEIGSTQGKAL IRWLLG SRKR  RNMAF++
Subjt:  AVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATTCTTGACAACAATGTCATACATATGCATGGGCTTAAATTTGGCGAAGCTCTTAGGGAGGGAAATCAAGTGAGCGGAGTCATGAGAGCGGTGAAATTGAAGGA
GATCCGGTTCCGCCAAATTTGGGTACCGAGTCCAGCCGAGTTCGGCGAGCCGTTGCTCGAGTTCGGCGTAGGACCGTATGACTTGGTTGGTTGGAAGGTAGACGAGGACC
CTGGGACGAGCCCCTGGGGCGGTGGCGGTGCCTGGATGGGGCGGGTCCTTGCACTCGAACGATTCCCTGGTTGGGTTGGATATCAGACGAGCCACACCATTTTTGTCGAA
CACCCAAACGCCGGACATGATTCGGGAGAGAGAGACCGGAGATCAGGTGGGGAAATAAAGAGAGCAAAAGCCGTAAAGGCAAGACGTGTAGGCGAATCAACTCATCAAGT
TCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGTCATTCGTTGGTTATTAGGGACATCTCGAAAACGTCTCGATCGGAATATGGCTTTTCAAATTCACTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGATTCTTGACAACAATGTCATACATATGCATGGGCTTAAATTTGGCGAAGCTCTTAGGGAGGGAAATCAAGTGAGCGGAGTCATGAGAGCGGTGAAATTGAAGGA
GATCCGGTTCCGCCAAATTTGGGTACCGAGTCCAGCCGAGTTCGGCGAGCCGTTGCTCGAGTTCGGCGTAGGACCGTATGACTTGGTTGGTTGGAAGGTAGACGAGGACC
CTGGGACGAGCCCCTGGGGCGGTGGCGGTGCCTGGATGGGGCGGGTCCTTGCACTCGAACGATTCCCTGGTTGGGTTGGATATCAGACGAGCCACACCATTTTTGTCGAA
CACCCAAACGCCGGACATGATTCGGGAGAGAGAGACCGGAGATCAGGTGGGGAAATAAAGAGAGCAAAAGCCGTAAAGGCAAGACGTGTAGGCGAATCAACTCATCAAGT
TCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGTCATTCGTTGGTTATTAGGGACATCTCGAAAACGTCTCGATCGGAATATGGCTTTTCAAATTCACTTCTGA
Protein sequenceShow/hide protein sequence
MAILDNNVIHMHGLKFGEALREGNQVSGVMRAVKLKEIRFRQIWVPSPAEFGEPLLEFGVGPYDLVGWKVDEDPGTSPWGGGGAWMGRVLALERFPGWVGYQTSHTIFVE
HPNAGHDSGERDRRSGGEIKRAKAVKARRVGESTHQVPIEIGSTQGKALVIRWLLGTSRKRLDRNMAFQIHF