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CsGy6G015355 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy6G015355
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationGy14Chr6:13983954..13984274
RNA-Seq ExpressionCsGy6G015355
SyntenyCsGy6G015355
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647019.1 hypothetical protein Csa_017017 [Cucumis sativus]9.47e-6498.11Show/hide
Query:  MKKKHQGNVKVKRVQLQGLRTKFETLRMKMSESVIDFFARTMSIANKMRIHGEKIEDVTIVEKILRSMTPKFNFVVCSIEESKDIDNLSIDELQSSLLIH
        MKKKHQGNVK KRVQLQGLRTKFETLRMKMSESVIDFFARTMSIANKMRIHGEKIEDVTIVEKILRSMTPKFNFVVCSIEESKDI+NLSIDELQSSLLIH
Subjt:  MKKKHQGNVKVKRVQLQGLRTKFETLRMKMSESVIDFFARTMSIANKMRIHGEKIEDVTIVEKILRSMTPKFNFVVCSIEESKDIDNLSIDELQSSLLIH

Query:  EQKVTK
        EQKVTK
Subjt:  EQKVTK

XP_008456818.1 PREDICTED: uncharacterized protein LOC103496656 [Cucumis melo]3.95e-5689.62Show/hide
Query:  MKKKHQGNVKVKRVQLQGLRTKFETLRMKMSESVIDFFARTMSIANKMRIHGEKIEDVTIVEKILRSMTPKFNFVVCSIEESKDIDNLSIDELQSSLLIH
        MKKKHQGNVK K VQLQGLR +FETLRMK SESVIDFFARTM+IANKMRIHGEK+EDVTI+EKILRSMT KFNFVVCSIEESKDIDNLSID+LQSSLL+H
Subjt:  MKKKHQGNVKVKRVQLQGLRTKFETLRMKMSESVIDFFARTMSIANKMRIHGEKIEDVTIVEKILRSMTPKFNFVVCSIEESKDIDNLSIDELQSSLLIH

Query:  EQKVTK
        EQKVTK
Subjt:  EQKVTK

XP_008464977.1 PREDICTED: uncharacterized protein LOC103502717 [Cucumis melo]3.72e-5992.45Show/hide
Query:  MKKKHQGNVKVKRVQLQGLRTKFETLRMKMSESVIDFFARTMSIANKMRIHGEKIEDVTIVEKILRSMTPKFNFVVCSIEESKDIDNLSIDELQSSLLIH
        MKKK+QGNVK KRVQLQGLRTKFETLRMK SESVIDFFARTM+IANKMRIHGEK+EDVTIV+KILRSMTPKFNFV CSIEESKDIDNLSIDELQSSLL+H
Subjt:  MKKKHQGNVKVKRVQLQGLRTKFETLRMKMSESVIDFFARTMSIANKMRIHGEKIEDVTIVEKILRSMTPKFNFVVCSIEESKDIDNLSIDELQSSLLIH

Query:  EQKVTK
        EQKVTK
Subjt:  EQKVTK

XP_024030010.1 uncharacterized protein LOC112094115 [Morus notabilis]5.49e-5382.08Show/hide
Query:  MKKKHQGNVKVKRVQLQGLRTKFETLRMKMSESVIDFFARTMSIANKMRIHGEKIEDVTIVEKILRSMTPKFNFVVCSIEESKDIDNLSIDELQSSLLIH
        MKKKHQGNVK +RVQLQ LRT+FETLRMK  ES+IDFF+RTM+IANKM+IHGEK+EDVTIVEKILRSMTPKFNF+VCSIEESKD+D LS+DELQSSLL+H
Subjt:  MKKKHQGNVKVKRVQLQGLRTKFETLRMKMSESVIDFFARTMSIANKMRIHGEKIEDVTIVEKILRSMTPKFNFVVCSIEESKDIDNLSIDELQSSLLIH

Query:  EQKVTK
        EQK+ +
Subjt:  EQKVTK

XP_027771419.1 uncharacterized protein LOC114076505 [Solanum pennellii]8.51e-5384.62Show/hide
Query:  MKKKHQGNVKVKRVQLQGLRTKFETLRMKMSESVIDFFARTMSIANKMRIHGEKIEDVTIVEKILRSMTPKFNFVVCSIEESKDIDNLSIDELQSSLLIH
        MKKK+QGNVK KRVQLQGLRT+FETLRMK  E+V DFF+RTM+IA+KMRIHGE+++DVTIVEKILRSMTPKFNFVVCSIEESKDID LSIDELQSSLL+H
Subjt:  MKKKHQGNVKVKRVQLQGLRTKFETLRMKMSESVIDFFARTMSIANKMRIHGEKIEDVTIVEKILRSMTPKFNFVVCSIEESKDIDNLSIDELQSSLLIH

Query:  EQKV
        EQK+
Subjt:  EQKV

TrEMBL top hitse value%identityAlignment
A0A1S3C2A9 uncharacterized protein LOC1034962161.22e-5289.8Show/hide
Query:  VKVKRVQLQGLRTKFETLRMKMSESVIDFFARTMSIANKMRIHGEKIEDVTIVEKILRSMTPKFNFVVCSIEESKDIDNLSIDELQSSLLIHEQKVTK
        +K KRVQLQ LRT+FETLRMK+SESVIDFFARTM IANKMRIHGEK+EDVTIVEKIL SMTPKFNFVVCSIEESKDI+NLSIDELQSSLL+HEQKVTK
Subjt:  VKVKRVQLQGLRTKFETLRMKMSESVIDFFARTMSIANKMRIHGEKIEDVTIVEKILRSMTPKFNFVVCSIEESKDIDNLSIDELQSSLLIHEQKVTK

A0A1S3C446 uncharacterized protein LOC1034966561.91e-5689.62Show/hide
Query:  MKKKHQGNVKVKRVQLQGLRTKFETLRMKMSESVIDFFARTMSIANKMRIHGEKIEDVTIVEKILRSMTPKFNFVVCSIEESKDIDNLSIDELQSSLLIH
        MKKKHQGNVK K VQLQGLR +FETLRMK SESVIDFFARTM+IANKMRIHGEK+EDVTI+EKILRSMT KFNFVVCSIEESKDIDNLSID+LQSSLL+H
Subjt:  MKKKHQGNVKVKRVQLQGLRTKFETLRMKMSESVIDFFARTMSIANKMRIHGEKIEDVTIVEKILRSMTPKFNFVVCSIEESKDIDNLSIDELQSSLLIH

Query:  EQKVTK
        EQKVTK
Subjt:  EQKVTK

A0A1S3CMQ7 uncharacterized protein LOC1035027171.80e-5992.45Show/hide
Query:  MKKKHQGNVKVKRVQLQGLRTKFETLRMKMSESVIDFFARTMSIANKMRIHGEKIEDVTIVEKILRSMTPKFNFVVCSIEESKDIDNLSIDELQSSLLIH
        MKKK+QGNVK KRVQLQGLRTKFETLRMK SESVIDFFARTM+IANKMRIHGEK+EDVTIV+KILRSMTPKFNFV CSIEESKDIDNLSIDELQSSLL+H
Subjt:  MKKKHQGNVKVKRVQLQGLRTKFETLRMKMSESVIDFFARTMSIANKMRIHGEKIEDVTIVEKILRSMTPKFNFVVCSIEESKDIDNLSIDELQSSLLIH

Query:  EQKVTK
        EQKVTK
Subjt:  EQKVTK

A0A5A7TA72 Retrovirus-related Pol polyprotein from transposon TNT 1-942.29e-5289.8Show/hide
Query:  VKVKRVQLQGLRTKFETLRMKMSESVIDFFARTMSIANKMRIHGEKIEDVTIVEKILRSMTPKFNFVVCSIEESKDIDNLSIDELQSSLLIHEQKVTK
        +K KRVQLQ LRT+FETLRMK+SESVIDFFARTM IANKMRIHGEK+EDVTIVEKIL SMTPKFNFVVCSIEESKDI+NLSIDELQSSLL+HEQKVTK
Subjt:  VKVKRVQLQGLRTKFETLRMKMSESVIDFFARTMSIANKMRIHGEKIEDVTIVEKILRSMTPKFNFVVCSIEESKDIDNLSIDELQSSLLIHEQKVTK

A0A5A7UUP0 Uncharacterized protein1.80e-5992.45Show/hide
Query:  MKKKHQGNVKVKRVQLQGLRTKFETLRMKMSESVIDFFARTMSIANKMRIHGEKIEDVTIVEKILRSMTPKFNFVVCSIEESKDIDNLSIDELQSSLLIH
        MKKK+QGNVK KRVQLQGLRTKFETLRMK SESVIDFFARTM+IANKMRIHGEK+EDVTIV+KILRSMTPKFNFV CSIEESKDIDNLSIDELQSSLL+H
Subjt:  MKKKHQGNVKVKRVQLQGLRTKFETLRMKMSESVIDFFARTMSIANKMRIHGEKIEDVTIVEKILRSMTPKFNFVVCSIEESKDIDNLSIDELQSSLLIH

Query:  EQKVTK
        EQKVTK
Subjt:  EQKVTK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAAGAAGCATCAAGGGAACGTGAAGGTAAAGAGGGTGCAGCTTCAAGGTCTTCGAACCAAATTCGAGACTCTACGAATGAAGATGAGCGAGTCGGTGATTGATTT
CTTTGCAAGAACAATGTCAATCGCCAACAAAATGCGGATTCATGGAGAAAAAATAGAGGACGTCACCATTGTGGAAAAGATTCTTCGATCAATGACACCGAAGTTTAATT
TTGTTGTATGTTCCATAGAAGAGTCCAAAGATATTGATAATCTTTCAATTGATGAGTTGCAGAGCTCTTTACTGATTCATGAGCAAAAAGTTACCAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAAGAAGCATCAAGGGAACGTGAAGGTAAAGAGGGTGCAGCTTCAAGGTCTTCGAACCAAATTCGAGACTCTACGAATGAAGATGAGCGAGTCGGTGATTGATTT
CTTTGCAAGAACAATGTCAATCGCCAACAAAATGCGGATTCATGGAGAAAAAATAGAGGACGTCACCATTGTGGAAAAGATTCTTCGATCAATGACACCGAAGTTTAATT
TTGTTGTATGTTCCATAGAAGAGTCCAAAGATATTGATAATCTTTCAATTGATGAGTTGCAGAGCTCTTTACTGATTCATGAGCAAAAAGTTACCAAGTAA
Protein sequenceShow/hide protein sequence
MKKKHQGNVKVKRVQLQGLRTKFETLRMKMSESVIDFFARTMSIANKMRIHGEKIEDVTIVEKILRSMTPKFNFVVCSIEESKDIDNLSIDELQSSLLIHEQKVTK