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CsGy6G015430 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy6G015430
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionPeptide chain release factor 1
Genome locationGy14Chr6:14163179..14165259
RNA-Seq ExpressionCsGy6G015430
SyntenyCsGy6G015430
Gene Ontology termsGO:0006415 - translational termination (biological process)
GO:0009658 - chloroplast organization (biological process)
GO:0010027 - thylakoid membrane organization (biological process)
GO:0032544 - plastid translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0016149 - translation release factor activity, codon specific (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008451621.1 PREDICTED: peptide chain release factor APG3, chloroplastic [Cucumis melo]4.22e-4190.24Show/hide
Query:  FRRCSLELKCFAPPFRASTLICMAEPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE
        F+RCSLELK FAPP RASTLICMAEPYLIVKLESAEKTWK+LSVKL +PD+VSNPTEYQKLAQS+SELDEVVSTFRKFKECE
Subjt:  FRRCSLELKCFAPPFRASTLICMAEPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE

XP_022959786.1 peptide chain release factor APG3, chloroplastic [Cucurbita moschata]4.86e-3987.65Show/hide
Query:  RRCSLELKCFAPPFRASTLICMAEPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE
        RRCSLELK  APPFRASTL+CMAEPYLI KLESAE TWK+LSVKL +PDIVSNPTEYQKLAQS+SELDEVVSTFR+FKECE
Subjt:  RRCSLELKCFAPPFRASTLICMAEPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE

XP_031745234.1 peptide chain release factor APG3, chloroplastic [Cucumis sativus]5.49e-4291.46Show/hide
Query:  FRRCSLELKCFAPPFRASTLICMAEPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE
        FRRC+L+LK FAPPFRASTLICMAEPYLIVKLESAEKTWK+LSVKL +PDIVSNPTEYQKLAQS+SELDEVVSTFRKFKECE
Subjt:  FRRCSLELKCFAPPFRASTLICMAEPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE

XP_038876731.1 peptide chain release factor APG3, chloroplastic isoform X1 [Benincasa hispida]6.36e-4091.25Show/hide
Query:  RCSLELKCFAPPFRASTLICMAEPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE
        RCSLE K FAPPFRASTLICMAEPYLIVKLESAEKTWK+LSVKL +PDIVSNPTEYQKLAQS+SELDEVV TFRKFKECE
Subjt:  RCSLELKCFAPPFRASTLICMAEPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE

XP_038876732.1 peptide chain release factor APG3, chloroplastic isoform X2 [Benincasa hispida]3.25e-4091.25Show/hide
Query:  RCSLELKCFAPPFRASTLICMAEPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE
        RCSLE K FAPPFRASTLICMAEPYLIVKLESAEKTWK+LSVKL +PDIVSNPTEYQKLAQS+SELDEVV TFRKFKECE
Subjt:  RCSLELKCFAPPFRASTLICMAEPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE

TrEMBL top hitse value%identityAlignment
A0A0A0K944 RF_PROK_I domain-containing protein8.87e-4392.68Show/hide
Query:  FRRCSLELKCFAPPFRASTLICMAEPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE
        FRRC+L+LK FAPPFRASTLICMAEPYLIVKLESAEKTWK+LSVKL +PDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE
Subjt:  FRRCSLELKCFAPPFRASTLICMAEPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE

A0A1S3BRZ7 peptide chain release factor APG3, chloroplastic2.04e-4190.24Show/hide
Query:  FRRCSLELKCFAPPFRASTLICMAEPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE
        F+RCSLELK FAPP RASTLICMAEPYLIVKLESAEKTWK+LSVKL +PD+VSNPTEYQKLAQS+SELDEVVSTFRKFKECE
Subjt:  FRRCSLELKCFAPPFRASTLICMAEPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE

A0A5A7VLD6 Peptide chain release factor APG32.04e-4190.24Show/hide
Query:  FRRCSLELKCFAPPFRASTLICMAEPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE
        F+RCSLELK FAPP RASTLICMAEPYLIVKLESAEKTWK+LSVKL +PD+VSNPTEYQKLAQS+SELDEVVSTFRKFKECE
Subjt:  FRRCSLELKCFAPPFRASTLICMAEPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE

A0A6J1H5U4 peptide chain release factor APG3, chloroplastic2.35e-3987.65Show/hide
Query:  RRCSLELKCFAPPFRASTLICMAEPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE
        RRCSLELK  APPFRASTL+CMAEPYLI KLESAE TWK+LSVKL +PDIVSNPTEYQKLAQS+SELDEVVSTFR+FKECE
Subjt:  RRCSLELKCFAPPFRASTLICMAEPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE

A0A6J1KZW8 peptide chain release factor APG3, chloroplastic2.35e-3987.65Show/hide
Query:  RRCSLELKCFAPPFRASTLICMAEPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE
        RRCSLELK  APPFRASTL+CMAEPYLI KLESAE TWK+LSVKL +PDIVSNPTEYQKLAQS+SELDEVVSTFR+FKECE
Subjt:  RRCSLELKCFAPPFRASTLICMAEPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE

SwissProt top hitse value%identityAlignment
B2ITM5 Peptide chain release factor 12.4e-0848.33Show/hide
Query:  MAEPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE
        MAE YL+ KL+S E+T+ +L+ +L +PD  SNP EYQ++A+S S L+EVV+T+  +K  +
Subjt:  MAEPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE

Q31L36 Peptide chain release factor 14.9e-0942.19Show/hide
Query:  MAEPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECEAKAK
        MAEPYLI KL+S E+T++ L+ +L +P+I ++P E+Q++A+  S ++E+V+T+ ++K+ +A+ K
Subjt:  MAEPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECEAKAK

Q3MF91 Peptide chain release factor 18.4e-0950.88Show/hide
Query:  MAEPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFK
        MAE YL+ KL+S E+T+ +L+ +L +PD   NP EYQK+A+S S L+EVV+T+  +K
Subjt:  MAEPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFK

Q5N0T6 Peptide chain release factor 14.9e-0942.19Show/hide
Query:  MAEPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECEAKAK
        MAEPYLI KL+S E+T++ L+ +L +P+I ++P E+Q++A+  S ++E+V+T+ ++K+ +A+ K
Subjt:  MAEPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECEAKAK

Q8RX79 Peptide chain release factor APG3, chloroplastic3.9e-2273.13Show/hide
Query:  RASTLICMAEPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE
        R   L+CMAEPYLI K+ES EKTWK+LSVKL +PD+VSN +EYQKLAQS+SELDEVV+ FR+FK+CE
Subjt:  RASTLICMAEPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE

Arabidopsis top hitse value%identityAlignment
AT3G62910.1 Peptide chain release factor 12.7e-2373.13Show/hide
Query:  RASTLICMAEPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE
        R   L+CMAEPYLI K+ES EKTWK+LSVKL +PD+VSN +EYQKLAQS+SELDEVV+ FR+FK+CE
Subjt:  RASTLICMAEPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGGATGGCGTCTTTCTTCCTCACTTGAGGCCTTTTTTTCATCTTATGGGCTCATCGCCTTCAGAAGATGCTCTCTGGAACTTAAATGCTTTGCACCTCCCTTTAG
AGCTTCAACTCTAATTTGCATGGCTGAACCTTATTTGATCGTGAAATTGGAATCTGCTGAGAAGACGTGGAAAAAATTATCGGTTAAGCTGGTCAATCCAGATATTGTCT
CAAACCCCACAGAGTATCAAAAACTAGCTCAATCAATATCAGAACTTGATGAGGTGGTATCTACTTTTAGAAAATTCAAGGAATGTGAGGCCAAAGCTAAGGTTGGTTTA
TAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGGATGGCGTCTTTCTTCCTCACTTGAGGCCTTTTTTTCATCTTATGGGCTCATCGCCTTCAGAAGATGCTCTCTGGAACTTAAATGCTTTGCACCTCCCTTTAG
AGCTTCAACTCTAATTTGCATGGCTGAACCTTATTTGATCGTGAAATTGGAATCTGCTGAGAAGACGTGGAAAAAATTATCGGTTAAGCTGGTCAATCCAGATATTGTCT
CAAACCCCACAGAGTATCAAAAACTAGCTCAATCAATATCAGAACTTGATGAGGTGGTATCTACTTTTAGAAAATTCAAGGAATGTGAGGCCAAAGCTAAGGTTGGTTTA
TAAGTAGTTGTTCTTAAAAAAGTTTCCCAACATAAAATTTGTTAAATTGATCTTAGTTTCTTCTTCTTTGTTGTGATTATCATGCCAACCTTATTAAAAGACAGTGGGAA
CGATGAGGATATGGTAGAGATGATTGCTTTAGAAATCAGTTCTTTATCCAGTGAGCTCAAAGATATCGAAGAGAAGCTTAAGGTGCTTTTGGTTCATGAACATGATTTTT
GCATGTGGAATTGAAGCCTTTGTAACATCTGATCTTCAGGGTTTATCTGAGTAGGGGCAAAAATCACTTGAAGCTCTAAAGCCAAAACTGAAGGTAGGCGTTGAGAAGGG
TTTTGCTTTTATACATAAGCAAGTTGTAGCTGCTTAAAAACTCTCATTTCAAGAACATTCATGGAGAGTAGATTGAATCCCAATAATCGAATTGCAACTTTTTTTAGTAG
TTTGTATGTTTCCATTTTACCTCGTAATTATAAAAATAATGTATTCGTTTCATTAGGAGTTCCTAG
Protein sequenceShow/hide protein sequence
MFGWRLSSSLEAFFSSYGLIAFRRCSLELKCFAPPFRASTLICMAEPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECEAKAKVGL