CuGenDBv2

Gene ID	CsGy6G015435
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	HECT-type E3 ubiquitin transferase
Genome location	Gy14Chr6:14175408..14177814
RNA-Seq Expression	CsGy6G015435
Synteny	CsGy6G015435
Gene Ontology terms	GO:0000209 - protein polyubiquitination (biological process) GO:0006511 - ubiquitin-dependent protein catabolic process (biological process) GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domains	IPR044611 - Ubiquitin-protein ligase E3B/C

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008458320.1 PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL6 [Cucumis melo]

3.81e-76

90.51

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Query:  MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESAD
        +LSIFA KDY+LNKALVDYRVKKFAYACIQ VHHNRNQLRNQLLAAPVN NTPAT+LLDTIVFLLQP LPWVCKIVGYFLERNAY L+RDITLTGKESAD
Subjt:  MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESAD

Query:  SHPKSSLASLEYLLSLLSSHVGEKPCCCPRVDPNLEF
        SHPKSSL SLE+LLSLLSSHVGEKPCCCPRVDPN  F
Subjt:  SHPKSSLASLEYLLSLLSSHVGEKPCCCPRVDPNLEF

XP_031742863.1 E3 ubiquitin-protein ligase UPL6-like [Cucumis sativus]

1.29e-92

98.54

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Query:  MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESAD
        MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESAD
Subjt:  MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESAD

Query:  SHPKSSLASLEYLLSLLSSHVGEKPCCCPRVDPNLEF
        SHPKSSLASLEYLLSLLSSHVGEKPCCCPRVDPN  F
Subjt:  SHPKSSLASLEYLLSLLSSHVGEKPCCCPRVDPNLEF

XP_031743101.1 E3 ubiquitin-protein ligase UPL6 [Cucumis sativus]

7.74e-79

93.43

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Query:  MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESAD
        MLSIFA KDY+LNKALVDYRVKKFAYACIQ VHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQP+LPWVCKIVGYFLERNAY L+RDITLTGKESAD
Subjt:  MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESAD

Query:  SHPKSSLASLEYLLSLLSSHVGEKPCCCPRVDPNLEF
        SHPKSSLASLE+LLSLLSSHVGEKPCCCPRVDPN  F
Subjt:  SHPKSSLASLEYLLSLLSSHVGEKPCCCPRVDPNLEF

XP_031743140.1 E3 ubiquitin-protein ligase UPL6-like [Cucumis sativus]

1.16e-92

98.54

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Query:  MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESAD
        MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESAD
Subjt:  MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESAD

Query:  SHPKSSLASLEYLLSLLSSHVGEKPCCCPRVDPNLEF
        SHPKSSLASLEYLLSLLSSHVGEKPCCCPRVDPN  F
Subjt:  SHPKSSLASLEYLLSLLSSHVGEKPCCCPRVDPNLEF

XP_031743141.1 E3 ubiquitin-protein ligase UPL6-like [Cucumis sativus]

5.14e-80

100

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Query:  MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESAD
        MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESAD
Subjt:  MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESAD

Query:  SHPKSSLASLEYLLSLLSSHVG
        SHPKSSLASLEYLLSLLSSHVG
Subjt:  SHPKSSLASLEYLLSLLSSHVG

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C746 HECT-type E3 ubiquitin transferase

1.84e-76

90.51

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Query:  MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESAD
        +LSIFA KDY+LNKALVDYRVKKFAYACIQ VHHNRNQLRNQLLAAPVN NTPAT+LLDTIVFLLQP LPWVCKIVGYFLERNAY L+RDITLTGKESAD
Subjt:  MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESAD

Query:  SHPKSSLASLEYLLSLLSSHVGEKPCCCPRVDPNLEF
        SHPKSSL SLE+LLSLLSSHVGEKPCCCPRVDPN  F
Subjt:  SHPKSSLASLEYLLSLLSSHVGEKPCCCPRVDPNLEF

A0A5D3BV28 HECT-type E3 ubiquitin transferase

2.19e-76

90.51

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Query:  MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESAD
        +LSIFA KDY+LNKALVDYRVKKFAYACIQ VHHNRNQLRNQLLAAPVN NTPAT+LLDTIVFLLQP LPWVCKIVGYFLERNAY L+RDITLTGKESAD
Subjt:  MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESAD

Query:  SHPKSSLASLEYLLSLLSSHVGEKPCCCPRVDPNLEF
        SHPKSSL SLE+LLSLLSSHVGEKPCCCPRVDPN  F
Subjt:  SHPKSSLASLEYLLSLLSSHVGEKPCCCPRVDPNLEF

A0A6J1H445 HECT-type E3 ubiquitin transferase

1.04e-69

83.94

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Query:  MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESAD
        +LSIFA KDY+ NKALVDYRVKKFAYACIQ V+HNRNQLRNQL AAP NS+TPATLLLD IVFLLQP+LPWVCKIVGYFLERNAY L+RDITL GKE+ D
Subjt:  MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESAD

Query:  SHPKSSLASLEYLLSLLSSHVGEKPCCCPRVDPNLEF
        SHP SS++SLE LLSLLSSHVGEKPCCCPRVDPN  F
Subjt:  SHPKSSLASLEYLLSLLSSHVGEKPCCCPRVDPNLEF

A0A6J1H671 HECT-type E3 ubiquitin transferase

6.18e-70

83.94

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Query:  MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESAD
        +LSIFA KDY+ NKALVDYRVKKFAYACIQ V+HNRNQLRNQL AAP NS+TPATLLLD IVFLLQP+LPWVCKIVGYFLERNAY L+RDITL GKE+ D
Subjt:  MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESAD

Query:  SHPKSSLASLEYLLSLLSSHVGEKPCCCPRVDPNLEF
        SHP SS++SLE LLSLLSSHVGEKPCCCPRVDPN  F
Subjt:  SHPKSSLASLEYLLSLLSSHVGEKPCCCPRVDPNLEF

A0A6J1KXX0 HECT-type E3 ubiquitin transferase

3.14e-69

83.21

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Query:  MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESAD
        +LSIFA  DY+ NKALVDYRVKKFAYACIQ V+HNRNQLRNQL AAP NS+TPATLLLD IVFLLQP+LPWVCKIVGYFLERNAY L+RDITL GKE+ D
Subjt:  MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESAD

Query:  SHPKSSLASLEYLLSLLSSHVGEKPCCCPRVDPNLEF
        SHP SS+ SLE LLSLLSSHVGEKPCCCPRVDPN  F
Subjt:  SHPKSSLASLEYLLSLLSSHVGEKPCCCPRVDPNLEF

SwissProt top hits

e value

%identity

Alignment

Q8RWB8 E3 ubiquitin-protein ligase UPL6

2.0e-29

43.48

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Query:  MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESAD
        ++S+F+  DY     LVD+RVKK A+ CI+ +H NRN+LR+QLL  P  ++    +L++ +  LL PKLPWVCKIV Y  +R  + L+R++  T KES  
Subjt:  MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESAD

Query:  SHPKS-SLASLEYLLSLLSSHVGEKPCCCPRVDPNLEF
            + ++ SLE +L L+  H+G +PCCC  VDP   F
Subjt:  SHPKS-SLASLEYLLSLLSSHVGEKPCCCPRVDPNLEF

Arabidopsis top hits

e value

%identity

Alignment

AT3G17205.1 ubiquitin protein ligase 6

1.4e-30

43.48

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Query:  MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESAD
        ++S+F+  DY     LVD+RVKK A+ CI+ +H NRN+LR+QLL  P  ++    +L++ +  LL PKLPWVCKIV Y  +R  + L+R++  T KES  
Subjt:  MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESAD

Query:  SHPKS-SLASLEYLLSLLSSHVGEKPCCCPRVDPNLEF
            + ++ SLE +L L+  H+G +PCCC  VDP   F
Subjt:  SHPKS-SLASLEYLLSLLSSHVGEKPCCCPRVDPNLEF

AT3G17205.2 ubiquitin protein ligase 6

1.4e-30

43.48

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Query:  MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESAD
        ++S+F+  DY     LVD+RVKK A+ CI+ +H NRN+LR+QLL  P  ++    +L++ +  LL PKLPWVCKIV Y  +R  + L+R++  T KES  
Subjt:  MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESAD

Query:  SHPKS-SLASLEYLLSLLSSHVGEKPCCCPRVDPNLEF
            + ++ SLE +L L+  H+G +PCCC  VDP   F
Subjt:  SHPKS-SLASLEYLLSLLSSHVGEKPCCCPRVDPNLEF

AT3G17205.3 ubiquitin protein ligase 6

1.4e-30

43.48

Show/hide

Query:  MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESAD
        ++S+F+  DY     LVD+RVKK A+ CI+ +H NRN+LR+QLL  P  ++    +L++ +  LL PKLPWVCKIV Y  +R  + L+R++  T KES  
Subjt:  MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESAD

Query:  SHPKS-SLASLEYLLSLLSSHVGEKPCCCPRVDPNLEF
            + ++ SLE +L L+  H+G +PCCC  VDP   F
Subjt:  SHPKS-SLASLEYLLSLLSSHVGEKPCCCPRVDPNLEF

Sequences

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CDS sequence

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ATGTTGAGCATTTTCGCTAGCAAGGATTATGTACTTAACAAGGCCTTAGTGGATTACAGAGTTAAGAAATTTGCATATGCTTGCATCCAGATTGTACACCATAATAGAAA
CCAATTGAGGAATCAACTTTTGGCTGCACCTGTGAACTCTAACACACCTGCAACTCTATTGTTGGACACAATTGTTTTCTTATTACAACCTAAACTCCCATGGGTTTGTA
AAATTGTTGGCTACTTCCTGGAAAGAAATGCATATCCGTTGATGAGGGATATCACTTTGACAGGGAAGGAAAGTGCAGATTCACATCCCAAGAGTTCATTGGCTTCTCTA
GAATATCTGCTGTCTCTTTTGAGTTCTCATGTTGGTGAGAAGCCATGTTGTTGCCCACGTGTTGATCCCAATTTGGAGTTTCTCCACTCAAATTCTTACTCTTCCTTTAC
TGTGTAA

mRNA sequence

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ACATTGCATACCAAAGAAAGAAAAGAGAATTGCAAATGCAAAACGTAAAAAAGTGAGACAATCAAGAGCTATAGAAAAAAACAAACAACACATGCAATATACATACAAAG
AGCCATCTTGGTTAGGTCAAGTAAAATGTGTTGAGTTCCCTAACTATCAGAGGCAGAAAAGATGATAGAAAAAATCCAGAATTTACACGAAGAAGTCCACAATCACCTAA
AAGAAACAACTCAGTCCTACAAAGACGCAACAGACAGAAAAAGAAGACAAACTACCTTTACCAAGGGAGATTTAGTAATGATTCACCTAAGAAAAAATCGATTTCCAACC
GAAACATACAACAAACTAAAAGACAGACAATTAGGACCATTCCGTGTCCTAAAGAGGATCGGAGATAATGCTTACAAAATAGAACTACCACCAGACTTACACATTCATTA
TGTTTTTAATGTCGCAGACCTAAAACAATACTATGCCCTAGATGATTTCTGCCTGGCCAACTAATTCTCAATAAATACCCCTTCTCTTAGCCATTATTGGCAGAGAATTC
ATTGCGAGAAATAATTCTACTTTGATTTACGTCAAATTATATGTTGTTTTTTATTGACCATTTTTACCTTCAGAAACTTCTTACCTTTGCAGCATATTCATTATTTTGCA
CCATAATTCCTTTTGTTTTAATATGTTTTATTTTCTTGAAGTTGGAGAAAACTAATTCTAGCCATATAACTGTTATTTGGCGGTTGCTAGTTGACGACTTTCCTTGTCAT
ATGAATTTTAGGATCACTCATTTTTGCTTATGGTAACATTTGAACACGTTATTAGGTGGTACTCAAGCTTATTATGAGGATTTTCCCTTGGGAAATTATTATAAAAGTGA
CAAATGGAAATATTGATTGGTTTCTGAACCACTGTGGTGCCCTTGTTTGTTATTTTCCCTTATGTTGCTTAATACTTGGTTTTCTAATTGATAATGTCATCTTAAAGTGT
TTCTAATTGATAGCACATATCTCTTAGTGTTAGTACTTTCTAACCTTTCTCTCTCTTACATATATAGGGGATATGTTGAGCATTTTCGCTAGCAAGGATTATGTACTTAA
CAAGGCCTTAGTGGATTACAGAGTTAAGAAATTTGCATATGCTTGCATCCAGATTGTACACCATAATAGAAACCAATTGAGGAATCAACTTTTGGCTGCACCTGTGAACT
CTAACACACCTGCAACTCTATTGTTGGACACAATTGTTTTCTTATTACAACCTAAACTCCCATGGGTTTGTAAAATTGTTGGCTACTTCCTGGAAAGAAATGCATATCCG
TTGATGAGGGATATCACTTTGACAGGGAAGGAAAGTGCAGATTCACATCCCAAGAGTTCATTGGCTTCTCTAGAATATCTGCTGTCTCTTTTGAGTTCTCATGTTGGTGA
GAAGCCATGTTGTTGCCCACGTGTTGATCCCAATTTGGAGTTTCTCCACTCAAATTCTTACTCTTCCTTTACTGTGTAACCCTTCAAACACGATGTGAACGATTGTGCGG
CACTTGTTCTAGCTCGGCGAACAAGTCAGCCGATCAAAATCTGCAAATCGCAGACAACTTTAACACATACTTCAACCTCCCCTCACGTTCTTGGAAAAATAGTTTTAGAA
AACATGAAAGATGATTAAATTGATTGAAAACGTTGTTAAAACAAGCATTGAAGACTGTCAATTGCAATAAGAAAGCATAGACTGCAAAGAGTACGACAAGGCTTGGGCAG
GGATTCAACAGGTATGCCTCCCCTATAGTACATTTTTAACATATGAAAATGCCGAAACGTCACACCCAAGCATATCGACTTGAAATTGAAAGCAACTACCTAAGCTACGT
GCAAGACATAAAGACAAGGTAAATTGGGGCTAATCGGAGCATACGGCCATAGGTAAACACACCTTGGACAAGTATGCTCGTTACACTAGGGACTTGTTCTTCTG

Protein sequence

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MLSIFASKDYVLNKALVDYRVKKFAYACIQIVHHNRNQLRNQLLAAPVNSNTPATLLLDTIVFLLQPKLPWVCKIVGYFLERNAYPLMRDITLTGKESADSHPKSSLASL
EYLLSLLSSHVGEKPCCCPRVDPNLEFLHSNSYSSFTV

CsGy6G015435 (gene) of Cucumber (Gy14) v2.1 genome