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CsGy6G015440 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy6G015440
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionPeptide chain release factor 1
Genome locationGy14Chr6:14186575..14188049
RNA-Seq ExpressionCsGy6G015440
SyntenyCsGy6G015440
Gene Ontology termsGO:0006415 - translational termination (biological process)
GO:0009658 - chloroplast organization (biological process)
GO:0010027 - thylakoid membrane organization (biological process)
GO:0032544 - plastid translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0016149 - translation release factor activity, codon specific (molecular function)
InterPro domainsIPR005139 - Peptide chain release factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008451621.1 PREDICTED: peptide chain release factor APG3, chloroplastic [Cucumis melo]1.06e-4484.62Show/hide
Query:  EPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE-----AKA-KVDSGNDEDMVEMIALEISSLSSELKDIEEKLK
        EPYLIVKLESAEKTWK+LSVKL +PD+VSNPTEYQKLAQS+SELDEVVSTFRKFKECE     AKA   +SGNDEDMVEMIALEISSLSSELKDIEEKLK
Subjt:  EPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE-----AKA-KVDSGNDEDMVEMIALEISSLSSELKDIEEKLK

Query:  VLLV
        V+L+
Subjt:  VLLV

XP_023514061.1 peptide chain release factor APG3, chloroplastic [Cucurbita pepo subsp. pepo]4.87e-4280.77Show/hide
Query:  EPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE-----AKAKV-DSGNDEDMVEMIALEISSLSSELKDIEEKLK
        EPYLI KLESAE TWK+LSVKL +PDIVSNPTEYQKLAQS+SELDEVVSTFR+FKECE     AKA   +SGNDEDM EMIALEISSLSS+LKDIEEKLK
Subjt:  EPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE-----AKAKV-DSGNDEDMVEMIALEISSLSSELKDIEEKLK

Query:  VLLV
        V+L+
Subjt:  VLLV

XP_031745234.1 peptide chain release factor APG3, chloroplastic [Cucumis sativus]7.55e-4585.58Show/hide
Query:  EPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE-----AKA-KVDSGNDEDMVEMIALEISSLSSELKDIEEKLK
        EPYLIVKLESAEKTWK+LSVKL +PDIVSNPTEYQKLAQS+SELDEVVSTFRKFKECE     AKA   +SGNDEDMVEMIALEISSLSSELKDIEEKLK
Subjt:  EPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE-----AKA-KVDSGNDEDMVEMIALEISSLSSELKDIEEKLK

Query:  VLLV
        V+L+
Subjt:  VLLV

XP_038876731.1 peptide chain release factor APG3, chloroplastic isoform X1 [Benincasa hispida]8.89e-4382.69Show/hide
Query:  EPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE-----AKA-KVDSGNDEDMVEMIALEISSLSSELKDIEEKLK
        EPYLIVKLESAEKTWK+LSVKL +PDIVSNPTEYQKLAQS+SELDEVV TFRKFKECE     AKA   +SGNDEDMVEMIALEISSLSS+LKDIEE LK
Subjt:  EPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE-----AKA-KVDSGNDEDMVEMIALEISSLSSELKDIEEKLK

Query:  VLLV
        V+L+
Subjt:  VLLV

XP_038876732.1 peptide chain release factor APG3, chloroplastic isoform X2 [Benincasa hispida]4.37e-4382.69Show/hide
Query:  EPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE-----AKA-KVDSGNDEDMVEMIALEISSLSSELKDIEEKLK
        EPYLIVKLESAEKTWK+LSVKL +PDIVSNPTEYQKLAQS+SELDEVV TFRKFKECE     AKA   +SGNDEDMVEMIALEISSLSS+LKDIEE LK
Subjt:  EPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE-----AKA-KVDSGNDEDMVEMIALEISSLSSELKDIEEKLK

Query:  VLLV
        V+L+
Subjt:  VLLV

TrEMBL top hitse value%identityAlignment
A0A0A0K944 RF_PROK_I domain-containing protein1.56e-4688Show/hide
Query:  EPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECEAKAKV--DSGNDEDMVEMIALEISSLSSELKDIEEKLKVLLV
        EPYLIVKLESAEKTWK+LSVKL +PDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE + +   DSGNDEDMVEMIALEISSLSSELKDIEEKLKV+L+
Subjt:  EPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECEAKAKV--DSGNDEDMVEMIALEISSLSSELKDIEEKLKVLLV

A0A1S3BRZ7 peptide chain release factor APG3, chloroplastic5.14e-4584.62Show/hide
Query:  EPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE-----AKA-KVDSGNDEDMVEMIALEISSLSSELKDIEEKLK
        EPYLIVKLESAEKTWK+LSVKL +PD+VSNPTEYQKLAQS+SELDEVVSTFRKFKECE     AKA   +SGNDEDMVEMIALEISSLSSELKDIEEKLK
Subjt:  EPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE-----AKA-KVDSGNDEDMVEMIALEISSLSSELKDIEEKLK

Query:  VLLV
        V+L+
Subjt:  VLLV

A0A5A7VLD6 Peptide chain release factor APG35.14e-4584.62Show/hide
Query:  EPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE-----AKA-KVDSGNDEDMVEMIALEISSLSSELKDIEEKLK
        EPYLIVKLESAEKTWK+LSVKL +PD+VSNPTEYQKLAQS+SELDEVVSTFRKFKECE     AKA   +SGNDEDMVEMIALEISSLSSELKDIEEKLK
Subjt:  EPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE-----AKA-KVDSGNDEDMVEMIALEISSLSSELKDIEEKLK

Query:  VLLV
        V+L+
Subjt:  VLLV

A0A6J1H5U4 peptide chain release factor APG3, chloroplastic2.36e-4280.77Show/hide
Query:  EPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE-----AKAKV-DSGNDEDMVEMIALEISSLSSELKDIEEKLK
        EPYLI KLESAE TWK+LSVKL +PDIVSNPTEYQKLAQS+SELDEVVSTFR+FKECE     AKA   +SGNDEDM EMIALEISSLSS+LKDIEEKLK
Subjt:  EPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE-----AKAKV-DSGNDEDMVEMIALEISSLSSELKDIEEKLK

Query:  VLLV
        V+L+
Subjt:  VLLV

A0A6J1KZW8 peptide chain release factor APG3, chloroplastic2.36e-4280.77Show/hide
Query:  EPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE-----AKAKV-DSGNDEDMVEMIALEISSLSSELKDIEEKLK
        EPYLI KLESAE TWK+LSVKL +PDIVSNPTEYQKLAQS+SELDEVVSTFR+FKECE     AKA   +SGNDEDM EMIALEISSLSS+LKDIEEKLK
Subjt:  EPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE-----AKAKV-DSGNDEDMVEMIALEISSLSSELKDIEEKLK

Query:  VLLV
        V+L+
Subjt:  VLLV

SwissProt top hitse value%identityAlignment
B7K205 Peptide chain release factor 11.9e-1340.38Show/hide
Query:  EPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECEAK---AK---VDSGNDEDMVEMIALEISSLSSELKDIEEKLK
        E YL+ KL+S ++T+++L+ +L +PDI +NP E Q++A+  S L+E V T+  +K+ + +   AK    D+G D +M EM ALE+  L+ +L+++E+KLK
Subjt:  EPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECEAK---AK---VDSGNDEDMVEMIALEISSLSSELKDIEEKLK

Query:  VLLV
        +LL+
Subjt:  VLLV

B7KI17 Peptide chain release factor 11.1e-1343.27Show/hide
Query:  EPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTF---RKFKECEAKAK---VDSGNDEDMVEMIALEISSLSSELKDIEEKLK
        E YL+ KL+S E+T+K+L+ +L +PDI +NP E Q++A++ S L+E V+T+   +K KE    A+    ++G D +M EM ALE+  L  +L+ +E KLK
Subjt:  EPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTF---RKFKECEAKAK---VDSGNDEDMVEMIALEISSLSSELKDIEEKLK

Query:  VLLV
        VLL+
Subjt:  VLLV

Q31L36 Peptide chain release factor 11.1e-1338.46Show/hide
Query:  EPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECEAKAK------VDSGNDEDMVEMIALEISSLSSELKDIEEKLK
        EPYLI KL+S E+T++ L+ +L +P+I ++P E+Q++A+  S ++E+V+T+ ++K+ +A+ K       +S  D ++ EM ALE++ L + L  +EE+LK
Subjt:  EPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECEAKAK------VDSGNDEDMVEMIALEISSLSSELKDIEEKLK

Query:  VLLV
        +LL+
Subjt:  VLLV

Q5N0T6 Peptide chain release factor 11.1e-1338.46Show/hide
Query:  EPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECEAKAK------VDSGNDEDMVEMIALEISSLSSELKDIEEKLK
        EPYLI KL+S E+T++ L+ +L +P+I ++P E+Q++A+  S ++E+V+T+ ++K+ +A+ K       +S  D ++ EM ALE++ L + L  +EE+LK
Subjt:  EPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECEAKAK------VDSGNDEDMVEMIALEISSLSSELKDIEEKLK

Query:  VLLV
        +LL+
Subjt:  VLLV

Q8RX79 Peptide chain release factor APG3, chloroplastic6.0e-2862.5Show/hide
Query:  EPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE---AKAKV---DSGNDEDMVEMIALEISSLSSELKDIEEKLK
        EPYLI K+ES EKTWK+LSVKL +PD+VSN +EYQKLAQS+SELDEVV+ FR+FK+CE    ++KV   ++G+DEDM EMI  EI+SL+ E++++E++LK
Subjt:  EPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE---AKAKV---DSGNDEDMVEMIALEISSLSSELKDIEEKLK

Query:  VLLV
        VLL+
Subjt:  VLLV

Arabidopsis top hitse value%identityAlignment
AT3G62910.1 Peptide chain release factor 14.3e-2962.5Show/hide
Query:  EPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE---AKAKV---DSGNDEDMVEMIALEISSLSSELKDIEEKLK
        EPYLI K+ES EKTWK+LSVKL +PD+VSN +EYQKLAQS+SELDEVV+ FR+FK+CE    ++KV   ++G+DEDM EMI  EI+SL+ E++++E++LK
Subjt:  EPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECE---AKAKV---DSGNDEDMVEMIALEISSLSSELKDIEEKLK

Query:  VLLV
        VLL+
Subjt:  VLLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAACCTTATTTGATCGTGAAATTGGAATCTGCTGAGAAGACGTGGAAAAAATTATCGGTTAAGCTGGTCAATCCAGATATTGTCTCAAACCCCACAGAGTATCAA
AAACTAGCTCAATCAATATCAGAACTTGATGAGGTGGTATCTACTTTTAGAAAATTCAAGGAATGTGAGGCCAAAGCTAAGGTTGACAGTGGGAACGATGAGGAT
ATGGTAGAGATGATTGCTTTAGAAATCAGTTCTTTATCCAGTGAGCTCAAAGATATCGAAGAGAAGCTTAAGGTGCTTTTGGTTCATGAACATGATTTTTGCATG
TGGAATTGA
mRNA sequenceShow/hide mRNA sequence
GAACCTTATTTGATCGTGAAATTGGAATCTGCTGAGAAGACGTGGAAAAAATTATCGGTTAAGCTGGTCAATCCAGATATTGTCTCAAACCCCACAGAGTATCAA
AAACTAGCTCAATCAATATCAGAACTTGATGAGGTGGTATCTACTTTTAGAAAATTCAAGGAATGTGAGGCCAAAGCTAAGGTTGACAGTGGGAACGATGAGGAT
ATGGTAGAGATGATTGCTTTAGAAATCAGTTCTTTATCCAGTGAGCTCAAAGATATCGAAGAGAAGCTTAAGGTGCTTTTGGTTCATGAACATGATTTTTGCATG
TGGAATTGA
Protein sequenceShow/hide protein sequence
EPYLIVKLESAEKTWKKLSVKLVNPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECEAKAKVDSGNDEDMVEMIALEISSLSSELKDIEEKLKVLLVHEHDFCM
WN