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CsGy6G015542 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy6G015542
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionPol protein
Genome locationGy14Chr6:14387149..14387538
RNA-Seq ExpressionCsGy6G015542
SyntenyCsGy6G015542
Gene Ontology termsNA
InterPro domainsIPR016197 - Chromo-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031736735.1 uncharacterized protein LOC116402077 [Cucumis sativus]1.52e-7996Show/hide
Query:  MRFEKKGKLSPCFVGPFEILERVGVVAYRLALPPSLSVVHNVFHVSMLRKYVADTSHVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLWR
        MRFEKKGKLSP FVGPFE LERVGVVAYRL LPPSLS VHNVFHVSMLRKYVADTSHVVDYEPLEIDEHL YVEQPVEILAREVKMLRNRSIPLVKVLWR
Subjt:  MRFEKKGKLSPCFVGPFEILERVGVVAYRLALPPSLSVVHNVFHVSMLRKYVADTSHVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLWR

Query:  NHRIEEATWEREEEMRTRYPELFQD
        NHRIEEATWEREEEMRTRYPELFQD
Subjt:  NHRIEEATWEREEEMRTRYPELFQD

XP_031737526.1 uncharacterized protein LOC116402419 [Cucumis sativus]2.24e-8197.6Show/hide
Query:  MRFEKKGKLSPCFVGPFEILERVGVVAYRLALPPSLSVVHNVFHVSMLRKYVADTSHVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLWR
        MRFEKKGKLSP FVGPFEILERVGVVAYRLALPPSLS VHNVFHVSMLRKYVADTSHVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLW+
Subjt:  MRFEKKGKLSPCFVGPFEILERVGVVAYRLALPPSLSVVHNVFHVSMLRKYVADTSHVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLWR

Query:  NHRIEEATWEREEEMRTRYPELFQD
        NHRIEEATWEREEEMRTRYPELFQD
Subjt:  NHRIEEATWEREEEMRTRYPELFQD

XP_031737528.1 uncharacterized protein LOC116402421 [Cucumis sativus]2.28e-8497.67Show/hide
Query:  MKGVMRFEKKGKLSPCFVGPFEILERVGVVAYRLALPPSLSVVHNVFHVSMLRKYVADTSHVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVK
        MKGVMRFEKKGKLSP FVGPFEILERVGVVAYRLALPPSLS VHNVFHVSMLRKYVADTSHVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVK
Subjt:  MKGVMRFEKKGKLSPCFVGPFEILERVGVVAYRLALPPSLSVVHNVFHVSMLRKYVADTSHVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVK

Query:  VLWRNHRIEEATWEREEEMRTRYPELFQD
        VLW+NHRIEEATWEREEEMRTRYPELFQD
Subjt:  VLWRNHRIEEATWEREEEMRTRYPELFQD

XP_031740423.1 uncharacterized protein LOC116403424 [Cucumis sativus]5.51e-8298.4Show/hide
Query:  MRFEKKGKLSPCFVGPFEILERVGVVAYRLALPPSLSVVHNVFHVSMLRKYVADTSHVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLWR
        MRFEKKGKLSP FVGPFEILERVGVVAYRLALPPSLS VHNVFHVSMLRKYVADTSHVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLWR
Subjt:  MRFEKKGKLSPCFVGPFEILERVGVVAYRLALPPSLSVVHNVFHVSMLRKYVADTSHVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLWR

Query:  NHRIEEATWEREEEMRTRYPELFQD
        NHRIEEATWEREEEMRTRYPELFQD
Subjt:  NHRIEEATWEREEEMRTRYPELFQD

XP_031742257.1 uncharacterized protein LOC116404138 [Cucumis sativus]3.73e-8096.8Show/hide
Query:  MRFEKKGKLSPCFVGPFEILERVGVVAYRLALPPSLSVVHNVFHVSMLRKYVADTSHVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLWR
        MRFEKKGKLSP FVGPFEILERVGVVAYRLALPPSLS VHNVFHVSMLRKYVADTSHVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLW+
Subjt:  MRFEKKGKLSPCFVGPFEILERVGVVAYRLALPPSLSVVHNVFHVSMLRKYVADTSHVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLWR

Query:  NHRIEEATWEREEEMRTRYPELFQD
        NHRIEEATWEREEEMRTRY ELFQD
Subjt:  NHRIEEATWEREEEMRTRYPELFQD

TrEMBL top hitse value%identityAlignment
A0A5A7TQM9 Pol protein5.23e-7482.95Show/hide
Query:  MKGVMRFEKKGKLSPCFVGPFEILERVGVVAYRLALPPSLSVVHNVFHVSMLRKYVADTSHVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVK
        M+GV+RFE++GKLSP FVGPFEILER+G VAYRLALPPSLS VH+VFHVSMLRKYV D SHVVDYEPLEIDE+LSYVEQPVE+LAREVK LRN+ IPLVK
Subjt:  MKGVMRFEKKGKLSPCFVGPFEILERVGVVAYRLALPPSLSVVHNVFHVSMLRKYVADTSHVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVK

Query:  VLWRNHRIEEATWEREEEMRTRYPELFQD
        VLWRNHR+EEATWERE++MR+RYPELF++
Subjt:  VLWRNHRIEEATWEREEEMRTRYPELFQD

A0A5A7U2G4 Pol protein1.34e-7484.5Show/hide
Query:  MKGVMRFEKKGKLSPCFVGPFEILERVGVVAYRLALPPSLSVVHNVFHVSMLRKYVADTSHVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVK
        MKGV+RFE++GKLSP FVGPFEILER+G VAYRLALPPSLS VHNVFHVSMLRKYV D SHVVDYEPLEIDE+LSYVEQPVE+LAREVK LRN+ IPLVK
Subjt:  MKGVMRFEKKGKLSPCFVGPFEILERVGVVAYRLALPPSLSVVHNVFHVSMLRKYVADTSHVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVK

Query:  VLWRNHRIEEATWEREEEMRTRYPELFQD
        VLWRNHR+EEATWERE++MR+RYPELF++
Subjt:  VLWRNHRIEEATWEREEEMRTRYPELFQD

A0A5A7UZD7 Pol protein4.18e-7482.95Show/hide
Query:  MKGVMRFEKKGKLSPCFVGPFEILERVGVVAYRLALPPSLSVVHNVFHVSMLRKYVADTSHVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVK
        M+GV+RFE++GKLSPCFVGPFEILER+G VAYRLALPPSLS VH+VFHVSMLRKYV D SHVVDYEPLEIDE+LSY EQPVE+LAREVK LRN+ IPLVK
Subjt:  MKGVMRFEKKGKLSPCFVGPFEILERVGVVAYRLALPPSLSVVHNVFHVSMLRKYVADTSHVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVK

Query:  VLWRNHRIEEATWEREEEMRTRYPELFQD
        VLWRNHR+EEATWERE++MR+RYPELF++
Subjt:  VLWRNHRIEEATWEREEEMRTRYPELFQD

A0A5A7V9X5 Pol protein3.68e-7483.72Show/hide
Query:  MKGVMRFEKKGKLSPCFVGPFEILERVGVVAYRLALPPSLSVVHNVFHVSMLRKYVADTSHVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVK
        MKGV+RFE++GKLSP FVGPFEILER+G VAYRLALPPSLS VH VFHVSMLRKYV D SHVVDYEPLEIDE+LSYVEQPVE+LAREVK LRN+ IPLVK
Subjt:  MKGVMRFEKKGKLSPCFVGPFEILERVGVVAYRLALPPSLSVVHNVFHVSMLRKYVADTSHVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVK

Query:  VLWRNHRIEEATWEREEEMRTRYPELFQD
        VLWRNHR+EEATWERE++MR+RYPELF++
Subjt:  VLWRNHRIEEATWEREEEMRTRYPELFQD

A0A5D3B9X0 Pol protein6.65e-7582.95Show/hide
Query:  MKGVMRFEKKGKLSPCFVGPFEILERVGVVAYRLALPPSLSVVHNVFHVSMLRKYVADTSHVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVK
        MKGV+RFE++GKLSPCFVGPFEILER+G +AYRLALPPSLS+VH+VFHVSMLRKYV D SHVVDY+PLEIDE+LSY EQPVE+LAREVKMLRNR IPLVK
Subjt:  MKGVMRFEKKGKLSPCFVGPFEILERVGVVAYRLALPPSLSVVHNVFHVSMLRKYVADTSHVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVK

Query:  VLWRNHRIEEATWEREEEMRTRYPELFQD
        VLWRNHR+EEATWERE++MR+R PELF++
Subjt:  VLWRNHRIEEATWEREEEMRTRYPELFQD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGGTGTTATGCGTTTTGAGAAGAAAGGGAAGTTAAGTCCTTGTTTTGTTGGACCATTTGAGATCTTAGAGAGGGTTGGTGTTGTGGCGTATCGCTTGGCATTACC
ACCATCTCTCTCTGTAGTTCATAATGTTTTCCATGTTTCGATGTTGAGGAAGTATGTGGCCGATACATCTCATGTAGTGGACTATGAACCCTTGGAGATTGATGAGCATT
TGAGCTATGTAGAACAACCTGTGGAGATTCTAGCCAGAGAGGTAAAGATGCTTCGTAATAGAAGCATTCCATTAGTAAAGGTTTTGTGGCGGAATCATCGAATTGAAGAG
GCGACATGGGAGCGAGAGGAAGAGATGAGGACTCGTTATCCAGAGTTATTTCAGGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGGGTGTTATGCGTTTTGAGAAGAAAGGGAAGTTAAGTCCTTGTTTTGTTGGACCATTTGAGATCTTAGAGAGGGTTGGTGTTGTGGCGTATCGCTTGGCATTACC
ACCATCTCTCTCTGTAGTTCATAATGTTTTCCATGTTTCGATGTTGAGGAAGTATGTGGCCGATACATCTCATGTAGTGGACTATGAACCCTTGGAGATTGATGAGCATT
TGAGCTATGTAGAACAACCTGTGGAGATTCTAGCCAGAGAGGTAAAGATGCTTCGTAATAGAAGCATTCCATTAGTAAAGGTTTTGTGGCGGAATCATCGAATTGAAGAG
GCGACATGGGAGCGAGAGGAAGAGATGAGGACTCGTTATCCAGAGTTATTTCAGGATTAG
Protein sequenceShow/hide protein sequence
MKGVMRFEKKGKLSPCFVGPFEILERVGVVAYRLALPPSLSVVHNVFHVSMLRKYVADTSHVVDYEPLEIDEHLSYVEQPVEILAREVKMLRNRSIPLVKVLWRNHRIEE
ATWEREEEMRTRYPELFQD