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CsGy6G015587 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy6G015587
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionBUD13 homolog
Genome locationGy14Chr6:14504907..14505918
RNA-Seq ExpressionCsGy6G015587
SyntenyCsGy6G015587
Gene Ontology termsGO:0000289 - nuclear-transcribed mRNA poly(A) tail shortening (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637312.1 hypothetical protein CSA_011806, partial [Cucumis sativus]2.85e-0678.12Show/hide
Query:  KVGMGQGLAKTREAEAELMELELEKDRPFARS
        K+  G GLAK R+ EAELMELELEKDRPFARS
Subjt:  KVGMGQGLAKTREAEAELMELELEKDRPFARS
KAE8652983.1 hypothetical protein Csa_023955, partial [Cucumis sativus]2.81e-0786.67Show/hide
Query:  GQGLAKTREAEAELMELELEKDRPFARSHP
        G GLAK RE EAELMELELEKDRPFARS P
Subjt:  GQGLAKTREAEAELMELELEKDRPFARSHP
KGN47347.2 hypothetical protein Csa_022925 [Cucumis sativus]1.09e-6699Show/hide
Query:  MLFIPIDITFSRLGGDKVGMGQGLAKTREAEAELMELELEKDRPFARSHPGGAVNQIPERYTIAGDVRYIYKFFIMIDAKCGLFKFFKARVWYVKDWRSL
        MLFIPIDITFSRLGGDKVGMGQGLAKTR AEAELMELELEKDRPFARSHPGGAVNQIPERYTIAGDVRYIYKFFIMIDAKCGLFKFFKARVWYVKDWRSL
Subjt:  MLFIPIDITFSRLGGDKVGMGQGLAKTREAEAELMELELEKDRPFARSHPGGAVNQIPERYTIAGDVRYIYKFFIMIDAKCGLFKFFKARVWYVKDWRSL
XP_031743783.1 uncharacterized protein LOC101221496 isoform X1 [Cucumis sativus]4.06e-2996.36Show/hide
Query:  GDKVGMGQGLAKTREAEAELMELELEKDRPFARSHPGGAVNQIPERYTIAGDVRY
        GDKVGMGQGLAKTR AEAELMELELEKDRPFARSHPGGAVNQIPERYTIAGDVR+
Subjt:  GDKVGMGQGLAKTREAEAELMELELEKDRPFARSHPGGAVNQIPERYTIAGDVRY
XP_031743784.1 uncharacterized protein LOC101221496 isoform X2 [Cucumis sativus]3.85e-4097.1Show/hide
Query:  MLFIPIDITFSRLGGDKVGMGQGLAKTREAEAELMELELEKDRPFARSHPGGAVNQIPERYTIAGDVRY
        MLFIPIDITFSRLGGDKVGMGQGLAKTR AEAELMELELEKDRPFARSHPGGAVNQIPERYTIAGDVR+
Subjt:  MLFIPIDITFSRLGGDKVGMGQGLAKTREAEAELMELELEKDRPFARSHPGGAVNQIPERYTIAGDVRY
TrEMBL top hitse value%identityAlignment
A0A0A0KHM0 Uncharacterized protein4.04e-2996.36Show/hide
Query:  GDKVGMGQGLAKTREAEAELMELELEKDRPFARSHPGGAVNQIPERYTIAGDVRY
        GDKVGMGQGLAKTR AEAELMELELEKDRPFARSHPGGAVNQIPERYTIAGDVR+
Subjt:  GDKVGMGQGLAKTREAEAELMELELEKDRPFARSHPGGAVNQIPERYTIAGDVRY
A0A0A0LTH5 Uncharacterized protein9.02e-0681.25Show/hide
Query:  KVGMGQGLAKTREAEAELMELELEKDRPFARS
        K+  G+GLA+ REAEAELMELELEKDRPFARS
Subjt:  KVGMGQGLAKTREAEAELMELELEKDRPFARS
A0A1S3CHR8 BUD13 homolog9.02e-0681.25Show/hide
Query:  KVGMGQGLAKTREAEAELMELELEKDRPFARS
        K+  G+GLA+ REAEAELMELELEKDRPFARS
Subjt:  KVGMGQGLAKTREAEAELMELELEKDRPFARS
A0A4Y1S230 Uncharacterized protein (Fragment)2.31e-0673.53Show/hide
Query:  GDKVGMGQGLAKTREAEAELMELELEKDRPFARS
        GDKVGMG+GLA+ REAE +L ELELEK++PFAR+
Subjt:  GDKVGMGQGLAKTREAEAELMELELEKDRPFARS
A0A5A7VKV1 BUD13-like protein9.02e-0681.25Show/hide
Query:  KVGMGQGLAKTREAEAELMELELEKDRPFARS
        K+  G+GLA+ REAEAELMELELEKDRPFARS
Subjt:  KVGMGQGLAKTREAEAELMELELEKDRPFARS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G31870.1 unknown protein9.5e-0750Show/hide
Query:  KVGMGQGLAKTREAEAELMELELEKDRPFARSHPGGAVNQIPERYTIAGD
        K+  G+GLA+ REAEA L ELELEKD+PFAR+     ++Q+ +     GD
Subjt:  KVGMGQGLAKTREAEAELMELELEKDRPFARSHPGGAVNQIPERYTIAGD
AT1G31870.2 unknown protein9.5e-0750Show/hide
Query:  KVGMGQGLAKTREAEAELMELELEKDRPFARSHPGGAVNQIPERYTIAGD
        K+  G+GLA+ REAEA L ELELEKD+PFAR+     ++Q+ +     GD
Subjt:  KVGMGQGLAKTREAEAELMELELEKDRPFARSHPGGAVNQIPERYTIAGD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTTCATTCCAATTGACATCACATTCTCCCGTCTTGGTGGAGATAAAGTTGGAATGGGACAGGGCTTAGCTAAAACACGAGAAGCAGAAGCTGAACTTATGGAGTT
AGAACTCGAGAAAGATAGACCATTTGCACGGTCACACCCAGGAGGTGCTGTTAATCAAATTCCAGAAAGATATACCATTGCTGGAGATGTAAGGTATATATACAAATTCT
TCATCATGATTGATGCCAAATGTGGTTTATTTAAATTCTTTAAGGCTCGTGTTTGGTATGTAAAAGATTGGAGAAGCTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTTTCATTCCAATTGACATCACATTCTCCCGTCTTGGTGGAGATAAAGTTGGAATGGGACAGGGCTTAGCTAAAACACGAGAAGCAGAAGCTGAACTTATGGAGTT
AGAACTCGAGAAAGATAGACCATTTGCACGGTCACACCCAGGAGGTGCTGTTAATCAAATTCCAGAAAGATATACCATTGCTGGAGATGTAAGGTATATATACAAATTCT
TCATCATGATTGATGCCAAATGTGGTTTATTTAAATTCTTTAAGGCTCGTGTTTGGTATGTAAAAGATTGGAGAAGCTTATAA
Protein sequenceShow/hide protein sequence
MLFIPIDITFSRLGGDKVGMGQGLAKTREAEAELMELELEKDRPFARSHPGGAVNQIPERYTIAGDVRYIYKFFIMIDAKCGLFKFFKARVWYVKDWRSL