CuGenDBv2

Gene ID	CsGy6G015590
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	protein HAPLESS 2
Genome location	Gy14Chr6:14506007..14507264
RNA-Seq Expression	CsGy6G015590
Synteny	CsGy6G015590
Gene Ontology terms	NA
InterPro domains	IPR040326 - HAP2/GCS1

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8647041.1 hypothetical protein Csa_022982 [Cucumis sativus]

1.57e-84

97.58

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Query:  MAFLMGFDFYCFVGVFLVYSAEVEKDDLDGPKDLGRCCKDFSCKPEEFYVTTRKCESNASARVVQICERLRDESGHIIMSTQPICCPCGAKRRTVEVSMG
        MAFLMGFDFYCF GVFLVYSAEVEKDDLDGPKDLGRCCKD SCKPEE+YVTTRKCESNASARVVQICERLRDESGHIIMSTQPICCPCGAKRRTVEVSMG
Subjt:  MAFLMGFDFYCFVGVFLVYSAEVEKDDLDGPKDLGRCCKDFSCKPEEFYVTTRKCESNASARVVQICERLRDESGHIIMSTQPICCPCGAKRRTVEVSMG

Query:  PENRTVLSNDNFLRANLNLHSSTV
        PENRTVLSNDNFLRANLNLHSSTV
Subjt:  PENRTVLSNDNFLRANLNLHSSTV

XP_004143990.1 protein HAPLESS 2 [Cucumis sativus]

3.08e-27

50.76

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Query:  KDFSCKPEEFYVTTRKCESNASARVVQICERLRDESGHIIMSTQPICCPCGAKRR---------------------------------------------
        +D   KPEEFYV TRKCE +ASARVVQICERLRDESGHII+STQPICCPCGAKRR                                             
Subjt:  KDFSCKPEEFYVTTRKCESNASARVVQICERLRDESGHIIMSTQPICCPCGAKRR---------------------------------------------

Query:  --------TVEVSMGPENRTVLSNDNFLRANL
                  EVS+GPENRTV+SNDNFLRANL
Subjt:  --------TVEVSMGPENRTVLSNDNFLRANL

XP_008437218.1 PREDICTED: protein HAPLESS 2 isoform X1 [Cucumis melo]

3.06e-27

50.76

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Query:  KDFSCKPEEFYVTTRKCESNASARVVQICERLRDESGHIIMSTQPICCPCGAKRR---------------------------------------------
        +D   KPEEFYVTTRKCE +ASARVVQICERLRDESGHII STQPICCPCGAKRR                                             
Subjt:  KDFSCKPEEFYVTTRKCESNASARVVQICERLRDESGHIIMSTQPICCPCGAKRR---------------------------------------------

Query:  --------TVEVSMGPENRTVLSNDNFLRANL
                  EVS+GPENRTV+SNDNFLR NL
Subjt:  --------TVEVSMGPENRTVLSNDNFLRANL

XP_008437219.1 PREDICTED: protein HAPLESS 2 isoform X2 [Cucumis melo]

3.01e-27

50.76

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Query:  KDFSCKPEEFYVTTRKCESNASARVVQICERLRDESGHIIMSTQPICCPCGAKRR---------------------------------------------
        +D   KPEEFYVTTRKCE +ASARVVQICERLRDESGHII STQPICCPCGAKRR                                             
Subjt:  KDFSCKPEEFYVTTRKCESNASARVVQICERLRDESGHIIMSTQPICCPCGAKRR---------------------------------------------

Query:  --------TVEVSMGPENRTVLSNDNFLRANL
                  EVS+GPENRTV+SNDNFLR NL
Subjt:  --------TVEVSMGPENRTVLSNDNFLRANL

XP_008437220.1 PREDICTED: protein HAPLESS 2 isoform X3 [Cucumis melo]

2.25e-27

50.76

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Query:  KDFSCKPEEFYVTTRKCESNASARVVQICERLRDESGHIIMSTQPICCPCGAKRR---------------------------------------------
        +D   KPEEFYVTTRKCE +ASARVVQICERLRDESGHII STQPICCPCGAKRR                                             
Subjt:  KDFSCKPEEFYVTTRKCESNASARVVQICERLRDESGHIIMSTQPICCPCGAKRR---------------------------------------------

Query:  --------TVEVSMGPENRTVLSNDNFLRANL
                  EVS+GPENRTV+SNDNFLR NL
Subjt:  --------TVEVSMGPENRTVLSNDNFLRANL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KQY8 HAP2-GCS1 domain-containing protein

3.09e-28

52.76

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Query:  KDFSCKPEEFYVTTRKCESNASARVVQICERLRDESGHIIMSTQPICCPCGAKRR---------------------------------------------
        +D   KPEEFYV TRKCE +ASARVVQICERLRDESGHII+STQPICCPCGAKRR                                             
Subjt:  KDFSCKPEEFYVTTRKCESNASARVVQICERLRDESGHIIMSTQPICCPCGAKRR---------------------------------------------

Query:  ---TVEVSMGPENRTVLSNDNFLRANL
             EVS+GPENRTV+SNDNFLRANL
Subjt:  ---TVEVSMGPENRTVLSNDNFLRANL

A0A1S3ATH0 protein HAPLESS 2 isoform X2

1.46e-27

50.76

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Query:  KDFSCKPEEFYVTTRKCESNASARVVQICERLRDESGHIIMSTQPICCPCGAKRR---------------------------------------------
        +D   KPEEFYVTTRKCE +ASARVVQICERLRDESGHII STQPICCPCGAKRR                                             
Subjt:  KDFSCKPEEFYVTTRKCESNASARVVQICERLRDESGHIIMSTQPICCPCGAKRR---------------------------------------------

Query:  --------TVEVSMGPENRTVLSNDNFLRANL
                  EVS+GPENRTV+SNDNFLR NL
Subjt:  --------TVEVSMGPENRTVLSNDNFLRANL

A0A1S3ATM0 protein HAPLESS 2 isoform X1

1.48e-27

50.76

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Query:  KDFSCKPEEFYVTTRKCESNASARVVQICERLRDESGHIIMSTQPICCPCGAKRR---------------------------------------------
        +D   KPEEFYVTTRKCE +ASARVVQICERLRDESGHII STQPICCPCGAKRR                                             
Subjt:  KDFSCKPEEFYVTTRKCESNASARVVQICERLRDESGHIIMSTQPICCPCGAKRR---------------------------------------------

Query:  --------TVEVSMGPENRTVLSNDNFLRANL
                  EVS+GPENRTV+SNDNFLR NL
Subjt:  --------TVEVSMGPENRTVLSNDNFLRANL

A0A1S3AU32 protein HAPLESS 2 isoform X3

1.09e-27

50.76

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Query:  KDFSCKPEEFYVTTRKCESNASARVVQICERLRDESGHIIMSTQPICCPCGAKRR---------------------------------------------
        +D   KPEEFYVTTRKCE +ASARVVQICERLRDESGHII STQPICCPCGAKRR                                             
Subjt:  KDFSCKPEEFYVTTRKCESNASARVVQICERLRDESGHIIMSTQPICCPCGAKRR---------------------------------------------

Query:  --------TVEVSMGPENRTVLSNDNFLRANL
                  EVS+GPENRTV+SNDNFLR NL
Subjt:  --------TVEVSMGPENRTVLSNDNFLRANL

A0A5A7THM3 Protein HAPLESS 2 isoform X1

1.54e-27

50.76

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Query:  KDFSCKPEEFYVTTRKCESNASARVVQICERLRDESGHIIMSTQPICCPCGAKRR---------------------------------------------
        +D   KPEEFYVTTRKCE +ASARVVQICERLRDESGHII STQPICCPCGAKRR                                             
Subjt:  KDFSCKPEEFYVTTRKCESNASARVVQICERLRDESGHIIMSTQPICCPCGAKRR---------------------------------------------

Query:  --------TVEVSMGPENRTVLSNDNFLRANL
                  EVS+GPENRTV+SNDNFLR NL
Subjt:  --------TVEVSMGPENRTVLSNDNFLRANL

SwissProt top hits

e value

%identity

Alignment

B9G4M9 Protein HAPLESS 2-B

1.1e-14

37.12

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Query:  KDFSCKPEEFYVTTRKCESNASARVVQICERLRDESGHIIMSTQPICCPCGAKRRT--------------------------------------------
        +D + KPEE +V TRKCE  A A VV+ CERLRDE G II  T+P+CCPCG  RR                                             
Subjt:  KDFSCKPEEFYVTTRKCESNASARVVQICERLRDESGHIIMSTQPICCPCGAKRRT--------------------------------------------

Query:  ---------VEVSMGPENRTVLSNDNFLRANL
                  EV +GPENRTV+S D+ LR NL
Subjt:  ---------VEVSMGPENRTVLSNDNFLRANL

F4JP36 Protein HAPLESS 2

3.2e-17

37.12

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Query:  KDFSCKPEEFYVTTRKCESNASARVVQICERLRDESGHIIMSTQPICCPCGAKR----------------------------------------------
        +D   KP+E++VTTRKCE +A   +VQICERLRDE G+++  TQPICCPCG +R                                              
Subjt:  KDFSCKPEEFYVTTRKCESNASARVVQICERLRDESGHIIMSTQPICCPCGAKR----------------------------------------------

Query:  -------RTVEVSMGPENRTVLSNDNFLRANL
               R  EV +GPENRT  +NDNFL+ NL
Subjt:  -------RTVEVSMGPENRTVLSNDNFLRANL

Q5W6B9 Protein HAPLESS 2-A

5.3e-12

32.82

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Query:  KDFSCKPEEFYVTTRKCESNASARVVQICERLRDESGHIIMSTQPICCPCGAKR----------------------------------------------
        +D + +P+E YV T KCE  A A+VV  CERL DE G++I  T+PICCPCG  R                                              
Subjt:  KDFSCKPEEFYVTTRKCESNASARVVQICERLRDESGHIIMSTQPICCPCGAKR----------------------------------------------

Query:  ------RTVEVSMGPENRTVLSNDNFLRANL
                 +V +GPEN+TV+S DNFLR  +
Subjt:  ------RTVEVSMGPENRTVLSNDNFLRANL

Arabidopsis top hits

e value

%identity

Alignment

AT4G11720.1 hapless 2

2.3e-18

37.12

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Query:  KDFSCKPEEFYVTTRKCESNASARVVQICERLRDESGHIIMSTQPICCPCGAKR----------------------------------------------
        +D   KP+E++VTTRKCE +A   +VQICERLRDE G+++  TQPICCPCG +R                                              
Subjt:  KDFSCKPEEFYVTTRKCESNASARVVQICERLRDESGHIIMSTQPICCPCGAKR----------------------------------------------

Query:  -------RTVEVSMGPENRTVLSNDNFLRANL
               R  EV +GPENRT  +NDNFL+ NL
Subjt:  -------RTVEVSMGPENRTVLSNDNFLRANL

Sequences

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CDS sequence

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ATGGCGTTCTTAATGGGGTTTGATTTTTATTGCTTCGTTGGTGTTTTTCTGGTGTATTCTGCGGAAGTGGAGAAAGATGACTTGGATGGACCTAAAGATCTCGGTCGATG
TTGCAAGGATTTTTCATGTAAACCTGAAGAATTTTATGTTACAACTCGCAAATGTGAGTCGAATGCTAGTGCGAGAGTGGTACAAATATGTGAAAGGTTAAGAGATGAAA
GTGGACATATAATTATGAGCACTCAACCTATATGTTGTCCTTGTGGAGCAAAGCGTCGAACAGTGGAAGTGTCCATGGGTCCTGAAAATAGAACAGTGTTGTCAAATGAT
AACTTCTTACGGGCTAATCTTAATCTTCATTCCAGCACTGTTTGA

mRNA sequence

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Protein sequence

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MAFLMGFDFYCFVGVFLVYSAEVEKDDLDGPKDLGRCCKDFSCKPEEFYVTTRKCESNASARVVQICERLRDESGHIIMSTQPICCPCGAKRRTVEVSMGPENRTVLSND
NFLRANLNLHSSTV

CsGy6G015590 (gene) of Cucumber (Gy14) v2.1 genome