; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy6G015890 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy6G015890
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionProtein transport protein Sec61 subunit beta
Genome locationGy14Chr6:14936385..14937160
RNA-Seq ExpressionCsGy6G015890
SyntenyCsGy6G015890
Gene Ontology termsGO:0006616 - SRP-dependent cotranslational protein targeting to membrane, translocation (biological process)
GO:0031204 - posttranslational protein targeting to membrane, translocation (biological process)
GO:0005784 - Sec61 translocon complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR016482 - Protein transport protein SecG/Sec61-beta/Sbh
IPR030671 - Protein transport Sec61-beta/Sbh


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149541.1 protein transport protein Sec61 subunit beta [Cucumis sativus]7.10e-65100Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

XP_008463929.1 PREDICTED: protein transport protein Sec61 subunit beta [Cucumis melo]2.04e-6499.08Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSA+ASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

XP_022140347.1 protein transport protein Sec61 subunit beta [Momordica charantia]5.02e-5184.4Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARG SQSQS++SS  T+RPGV APRGSAAATAGLRRRR  ST ++ S G+VG GSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARS AGV
Subjt:  YRARSAAGV

XP_022958107.1 protein transport protein Sec61 subunit beta [Cucurbita moschata]2.22e-5488.07Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARG SQSQS++SS  T+RPGVVAPRGSAAATAGLRRRR GSTS + +TGLV GGSSGGGNMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVFGKL
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

XP_038902812.1 protein transport protein Sec61 subunit beta [Benincasa hispida]4.16e-5993.58Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARG SQSQS++SS  T+RPGVVAPRGSAAATAGLRRRRPGSTSA+ASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

TrEMBL top hitse value%identityAlignment
A0A0A0KHR1 Protein transport protein Sec61 subunit beta3.44e-65100Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

A0A1S3CKE5 Protein transport protein Sec61 subunit beta9.86e-6599.08Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSA+ASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

A0A5D3CTD4 Protein transport protein Sec61 subunit beta9.86e-6599.08Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSA+ASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

A0A6J1H102 Protein transport protein Sec61 subunit beta1.08e-5488.07Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARG SQSQS++SS  T+RPGVVAPRGSAAATAGLRRRR GSTS + +TGLV GGSSGGGNMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVFGKL
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

A0A6J1JZ65 Protein transport protein Sec61 subunit beta1.08e-5488.07Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARG SQSQS++SS  T+RPGVVAPRGSAAATAGLRRRR GSTS + +TGLV GGSSGGGNMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVFGKL
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

SwissProt top hitse value%identityAlignment
A8I6P9 Protein transport protein Sec61 subunit beta3.5e-0745.74Show/hide
Query:  SQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGK
        SQSQ+ST      R    AP G+    AG  RRRP   S  + T      +      + FYTDD PG K+SP VV+ MSL FI FVT LHV GK
Subjt:  SQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGK

P38389 Protein transport protein Sec61 subunit beta3.7e-1765.38Show/hide
Query:  RGSAAATAGLRRRRPGSTSASASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY
        RGSAAATA +RRR+P       ++G  GGG+SGG  G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV GKLY
Subjt:  RGSAAATAGLRRRRPGSTSASASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY

P60467 Protein transport protein Sec61 subunit beta1.0e-0642.71Show/hide
Query:  SSTSSGSTARPGVVAPRGSAAATAGLRRRRP--GSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA
        S T+ GS+ R    A    AA +   +R+    G+ SA  +T      S+G G M RFYT+D+PGLK+ P  VLVMSL FI  V  LH++GK  R+
Subjt:  SSTSSGSTARPGVVAPRGSAAATAGLRRRRP--GSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA

P60468 Protein transport protein Sec61 subunit beta1.0e-0642.71Show/hide
Query:  SSTSSGSTARPGVVAPRGSAAATAGLRRRRP--GSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA
        S T+ GS+ R    A    AA +   +R+    G+ SA  +T      S+G G M RFYT+D+PGLK+ P  VLVMSL FI  V  LH++GK  R+
Subjt:  SSTSSGSTARPGVVAPRGSAAATAGLRRRRP--GSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA

Q9CQS8 Protein transport protein Sec61 subunit beta1.0e-0642.71Show/hide
Query:  SSTSSGSTARPGVVAPRGSAAATAGLRRRRP--GSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA
        S T+ GS+ R    A    AA +   +R+    G+ SA  +T      S+G G M RFYT+D+PGLK+ P  VLVMSL FI  V  LH++GK  R+
Subjt:  SSTSSGSTARPGVVAPRGSAAATAGLRRRRP--GSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA

Arabidopsis top hitse value%identityAlignment
AT2G45070.1 Preprotein translocase Sec, Sec61-beta subunit protein2.6e-1865.38Show/hide
Query:  RGSAAATAGLRRRRPGSTSASASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY
        RGSAAATA +RRR+P       ++G  GGG+SGG  G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV GKLY
Subjt:  RGSAAATAGLRRRRPGSTSASASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY

AT2G45070.2 Preprotein translocase Sec, Sec61-beta subunit protein2.6e-1865.38Show/hide
Query:  RGSAAATAGLRRRRPGSTSASASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY
        RGSAAATA +RRR+P       ++G  GGG+SGG  G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV GKLY
Subjt:  RGSAAATAGLRRRRPGSTSASASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY

AT2G45070.3 Preprotein translocase Sec, Sec61-beta subunit protein2.6e-1865.38Show/hide
Query:  RGSAAATAGLRRRRPGSTSASASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY
        RGSAAATA +RRR+P       ++G  GGG+SGG  G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV GKLY
Subjt:  RGSAAATAGLRRRRPGSTSASASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY

AT2G45070.4 Preprotein translocase Sec, Sec61-beta subunit protein2.6e-1865.38Show/hide
Query:  RGSAAATAGLRRRRPGSTSASASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY
        RGSAAATA +RRR+P       ++G  GGG+SGG  G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV GKLY
Subjt:  RGSAAATAGLRRRRPGSTSASASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY

AT5G60460.1 Preprotein translocase Sec, Sec61-beta subunit protein4.2e-3274.07Show/hide
Query:  MARGASQSQSSTSSG-STARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGK
        MARG+SQSQ STS+G STARPG+ APRGSAAATAG+RRRR G     +S G  G G SG  NMLRFYTDDAPGLKISPTVVL+MSLCFIGFVT LHVFGK
Subjt:  MARGASQSQSSTSSG-STARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGK

Query:  LYRARSAA
        LY  +S +
Subjt:  LYRARSAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGAGGCGCTTCTCAATCCCAATCCTCAACCTCCTCTGGCTCTACTGCTAGACCTGGCGTTGTCGCTCCTCGCGGCTCTGCGGCGGCCACTGCTGGCCTCCGTCG
CCGCCGTCCTGGCTCTACTTCTGCCTCCGCCTCTACTGGACTCGTAGGCGGCGGATCAAGCGGCGGCGGTAACATGCTGAGATTCTACACCGACGATGCTCCAGGCTTAA
AGATTTCTCCCACCGTCGTCCTCGTTATGAGCCTCTGCTTCATCGGCTTCGTCACTGGCCTCCACGTCTTTGGTAAGCTCTACCGTGCACGATCCGCCGCTGGTGTTTAA
mRNA sequenceShow/hide mRNA sequence
CCGATCAGATTTTTCTCCCAAATTCACATATTTCCGATCATCTTCTCCGATTCTCAATTCCATGGCCAGAGGCGCTTCTCAATCCCAATCCTCAACCTCCTCTGGCTCTA
CTGCTAGACCTGGCGTTGTCGCTCCTCGCGGCTCTGCGGCGGCCACTGCTGGCCTCCGTCGCCGCCGTCCTGGCTCTACTTCTGCCTCCGCCTCTACTGGACTCGTAGGC
GGCGGATCAAGCGGCGGCGGTAACATGCTGAGATTCTACACCGACGATGCTCCAGGCTTAAAGATTTCTCCCACCGTCGTCCTCGTTATGAGCCTCTGCTTCATCGGCTT
CGTCACTGGCCTCCACGTCTTTGGTAAGCTCTACCGTGCACGATCCGCCGCTGGTGTTTAATTCTATGCTGAGTTCGTTTACCGTGCCTTTTCCCTTCCCGATCTTTTCG
TTTCCTAGATTAAATGTTCAAGTTTCTCTGTAAATTTCACAATCGTTTTACTTTCTTGAGTTTTCAATTCCATCACGGTTGTGGACGTATCAAAAGGAACGAGGTCGTTC
TCTTTAGCTGATAATTTCTCTTTGGATCAATCTAGTTCTTGTGAATGATGCGGATTGCAGAGTTTTTTCCTTTTTGTCTGTGTATTGAGTTAATCTCACTCAAAATTGTG
CTTTTATATGGTATGATGATTAGCTATTTCTTCTCGATTTTGTTTTGGATGATTTAGCGGGGATTCTATATATGGTTTCTTCTTTATTAGCAAATAAACTTTGCACGTTT
TCTGAT
Protein sequenceShow/hide protein sequence
MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARSAAGV