; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy6G015910 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy6G015910
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionDNA polymerase epsilon subunit C
Genome locationGy14Chr6:14944370..14947453
RNA-Seq ExpressionCsGy6G015910
SyntenyCsGy6G015910
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR003958 - Transcription factor CBF/NF-Y/archaeal histone domain
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149539.2 chromatin accessibility complex protein 1 isoform X1 [Cucumis sativus]4.18e-139100Show/hide
Query:  MASSKKSSTEAKSKEVGTSKPSPKAKTHNNARNSDKDISKKKKKKKKISISISTNNGSVKDNHALAVSAPGASASEDADAADEDKAETTSRKSNTSKSKK
        MASSKKSSTEAKSKEVGTSKPSPKAKTHNNARNSDKDISKKKKKKKKISISISTNNGSVKDNHALAVSAPGASASEDADAADEDKAETTSRKSNTSKSKK
Subjt:  MASSKKSSTEAKSKEVGTSKPSPKAKTHNNARNSDKDISKKKKKKKKISISISTNNGSVKDNHALAVSAPGASASEDADAADEDKAETTSRKSNTSKSKK

Query:  VKRNHAKEEDNRYAAEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLSDF
        VKRNHAKEEDNRYAAEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLSDF
Subjt:  VKRNHAKEEDNRYAAEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLSDF

Query:  VPEKLKFEDALKERSMAESGKD
        VPEKLKFEDALKERSMAESGKD
Subjt:  VPEKLKFEDALKERSMAESGKD

XP_008463933.1 PREDICTED: DNA polymerase epsilon subunit C [Cucumis melo]3.58e-12492.41Show/hide
Query:  MASSKKSSTEAKSKEVGTSKPSPKAKTHNNARNSDKDISKKKKKKKKISISISTNNGSVKDNHALAVSAPGASASEDADAADEDKAETTSRKSNTSKSKK
        MASSKKSSTEAK KE GTSKP+PKAKTHNNARNSDK+ISKKKKKKKKIS  ISTNNGSVKDN  LAVS PG SASED DAADEDKAETTSRK  TSKSKK
Subjt:  MASSKKSSTEAKSKEVGTSKPSPKAKTHNNARNSDKDISKKKKKKKKISISISTNNGSVKDNHALAVSAPGASASEDADAADEDKAETTSRKSNTSKSKK

Query:  VKRNHAKEEDNRYAAEEE--AEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLS
        VKRNHAKEEDN YA EEE  AEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLS
Subjt:  VKRNHAKEEDNRYAAEEE--AEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLS

Query:  DFVPEKLKFEDALKERSMAESGKD
        DFVPEKLKFEDALKERSMAESGKD
Subjt:  DFVPEKLKFEDALKERSMAESGKD

XP_022986059.1 DNA polymerase epsilon subunit C-like isoform X1 [Cucurbita maxima]3.88e-9774.15Show/hide
Query:  MASSKKSSTEAKSKEVGTSKPSPKAKTHNNARNSDKDISKKKK---KKKKISISIS--TNNGSVKDNHALAVSAPGASASEDADAADEDKAETTSRKSNT
        MASSKKSS+EAKSKE GTSKP+PK KTHNN  N++ +  K  K   KKKK+S + +  T+NGSVK+N  L +SAPG         A+ED+ ETTS+  NT
Subjt:  MASSKKSSTEAKSKEVGTSKPSPKAKTHNNARNSDKDISKKKK---KKKKISISIS--TNNGSVKDNHALAVSAPGASASEDADAADEDKAETTSRKSNT

Query:  SKSKKVKRNHAKEEDNRYA---------AEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSS
        SKSKKVKRNH K+E+N YA         AEEEAEEKIYKFPM+RIKKIMRDENSDLRINQEALFLVNKA+EMFLVQFCKDAYACCAQDRKKSLAYKHLSS
Subjt:  SKSKKVKRNHAKEEDNRYA---------AEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSS

Query:  VVSKRKRYDFLSDFVPEKLKFEDALKERSMAESGKD
        VV KRKRYDFLSDFVPEKLKFEDALKERSMAESGKD
Subjt:  VVSKRKRYDFLSDFVPEKLKFEDALKERSMAESGKD

XP_031743864.1 DNA polymerase epsilon subunit 4 isoform X2 [Cucumis sativus]1.46e-111100Show/hide
Query:  MASSKKSSTEAKSKEVGTSKPSPKAKTHNNARNSDKDISKKKKKKKKISISISTNNGSVKDNHALAVSAPGASASEDADAADEDKAETTSRKSNTSKSKK
        MASSKKSSTEAKSKEVGTSKPSPKAKTHNNARNSDKDISKKKKKKKKISISISTNNGSVKDNHALAVSAPGASASEDADAADEDKAETTSRKSNTSKSKK
Subjt:  MASSKKSSTEAKSKEVGTSKPSPKAKTHNNARNSDKDISKKKKKKKKISISISTNNGSVKDNHALAVSAPGASASEDADAADEDKAETTSRKSNTSKSKK

Query:  VKRNHAKEEDNRYAAEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHL
        VKRNHAKEEDNRYAAEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHL
Subjt:  VKRNHAKEEDNRYAAEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHL

XP_038902902.1 DNA polymerase epsilon subunit C [Benincasa hispida]3.33e-11186.67Show/hide
Query:  MASSKKSSTEAKSKEVGTSKPSPKAKTHNNARNSDKDISKKKKKKKKISISISTNNGSVKDNHALAVSAPG-ASASEDADAADEDKAETTSRKSNTSKSK
        MASSKKSSTEAKSKE GTSKP+PK KTHNNAR SDKD S KKKKKKK    IST NGSVKDN ALA S PG ASASE+ DA DED+AETTS K NTSKSK
Subjt:  MASSKKSSTEAKSKEVGTSKPSPKAKTHNNARNSDKDISKKKKKKKKISISISTNNGSVKDNHALAVSAPG-ASASEDADAADEDKAETTSRKSNTSKSK

Query:  KVKRNHAKEEDNRYAAEEE--AEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFL
        KV+RNH K+E+N YAAEEE  AEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVV KRKRYDFL
Subjt:  KVKRNHAKEEDNRYAAEEE--AEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFL

Query:  SDFVPEKLKFEDALKERSMAESGKD
        SDFVPEKLKFEDALKER+MAESGKD
Subjt:  SDFVPEKLKFEDALKERSMAESGKD

TrEMBL top hitse value%identityAlignment
A0A0A0KCQ2 CBFD_NFYB_HMF domain-containing protein2.02e-139100Show/hide
Query:  MASSKKSSTEAKSKEVGTSKPSPKAKTHNNARNSDKDISKKKKKKKKISISISTNNGSVKDNHALAVSAPGASASEDADAADEDKAETTSRKSNTSKSKK
        MASSKKSSTEAKSKEVGTSKPSPKAKTHNNARNSDKDISKKKKKKKKISISISTNNGSVKDNHALAVSAPGASASEDADAADEDKAETTSRKSNTSKSKK
Subjt:  MASSKKSSTEAKSKEVGTSKPSPKAKTHNNARNSDKDISKKKKKKKKISISISTNNGSVKDNHALAVSAPGASASEDADAADEDKAETTSRKSNTSKSKK

Query:  VKRNHAKEEDNRYAAEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLSDF
        VKRNHAKEEDNRYAAEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLSDF
Subjt:  VKRNHAKEEDNRYAAEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLSDF

Query:  VPEKLKFEDALKERSMAESGKD
        VPEKLKFEDALKERSMAESGKD
Subjt:  VPEKLKFEDALKERSMAESGKD

A0A1S3CKU7 DNA polymerase epsilon subunit C1.73e-12492.41Show/hide
Query:  MASSKKSSTEAKSKEVGTSKPSPKAKTHNNARNSDKDISKKKKKKKKISISISTNNGSVKDNHALAVSAPGASASEDADAADEDKAETTSRKSNTSKSKK
        MASSKKSSTEAK KE GTSKP+PKAKTHNNARNSDK+ISKKKKKKKKIS  ISTNNGSVKDN  LAVS PG SASED DAADEDKAETTSRK  TSKSKK
Subjt:  MASSKKSSTEAKSKEVGTSKPSPKAKTHNNARNSDKDISKKKKKKKKISISISTNNGSVKDNHALAVSAPGASASEDADAADEDKAETTSRKSNTSKSKK

Query:  VKRNHAKEEDNRYAAEEE--AEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLS
        VKRNHAKEEDN YA EEE  AEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLS
Subjt:  VKRNHAKEEDNRYAAEEE--AEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLS

Query:  DFVPEKLKFEDALKERSMAESGKD
        DFVPEKLKFEDALKERSMAESGKD
Subjt:  DFVPEKLKFEDALKERSMAESGKD

A0A5A7T1L3 DNA polymerase epsilon subunit C1.94e-9689.95Show/hide
Query:  MASSKKSSTEAKSKEVGTSKPSPKAKTHNNARNSDKDISKKKKKKKKISISISTNNGSVKDNHALAVSAPGASASEDADAADEDKAETTSRKSNTSKSKK
        MASSKKSSTEAK KE GTSKP+PKAKTHNNARNSDK+ISKKKKKKKKIS  ISTNNGSVKDN  LAVS PG SASED DAADEDKAETTSRK  TSKSKK
Subjt:  MASSKKSSTEAKSKEVGTSKPSPKAKTHNNARNSDKDISKKKKKKKKISISISTNNGSVKDNHALAVSAPGASASEDADAADEDKAETTSRKSNTSKSKK

Query:  VKRNHAKEEDNRYAAEEE--AEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSV
        VKRNHAKEEDN YA EEE  AEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHL +V
Subjt:  VKRNHAKEEDNRYAAEEE--AEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSV

A0A6J1CGZ0 DNA polymerase epsilon subunit C1.64e-9674.89Show/hide
Query:  MASSKKSSTEAKSKEVGTSKPSPKAK------THNNARNSDKDISKKKKKKKKISISISTNNGSVKDNHALAVSAPGASASEDADAADEDKAETTSRKSN
        MASSKKSSTEAKSKE GTSK + K K      T +NA  SDKD+SKK   KKKIS     NNGS ++N    +SAP +++ ED   ADED+ ETTSRK+N
Subjt:  MASSKKSSTEAKSKEVGTSKPSPKAK------THNNARNSDKDISKKKKKKKKISISISTNNGSVKDNHALAVSAPGASASEDADAADEDKAETTSRKSN

Query:  TSKSKKVKRNHAKEEDNRYAAEEE----AEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSK
        +SKSKKVKRNH K+E+N Y  EEE     EEKIYKFPMHRIKKI RDENSDLRINQEALFLVNKA+EMFLVQFCKDAYACCAQDRKKSLAYKHLSSVV K
Subjt:  TSKSKKVKRNHAKEEDNRYAAEEE----AEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSK

Query:  RKRYDFLSDFVPEKLKFEDALKERSMAESGK
        RKRYDFLSDFVPEKLKFEDALKERSMAESGK
Subjt:  RKRYDFLSDFVPEKLKFEDALKERSMAESGK

A0A6J1JF10 DNA polymerase epsilon subunit C-like isoform X11.88e-9774.15Show/hide
Query:  MASSKKSSTEAKSKEVGTSKPSPKAKTHNNARNSDKDISKKKK---KKKKISISIS--TNNGSVKDNHALAVSAPGASASEDADAADEDKAETTSRKSNT
        MASSKKSS+EAKSKE GTSKP+PK KTHNN  N++ +  K  K   KKKK+S + +  T+NGSVK+N  L +SAPG         A+ED+ ETTS+  NT
Subjt:  MASSKKSSTEAKSKEVGTSKPSPKAKTHNNARNSDKDISKKKK---KKKKISISIS--TNNGSVKDNHALAVSAPGASASEDADAADEDKAETTSRKSNT

Query:  SKSKKVKRNHAKEEDNRYA---------AEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSS
        SKSKKVKRNH K+E+N YA         AEEEAEEKIYKFPM+RIKKIMRDENSDLRINQEALFLVNKA+EMFLVQFCKDAYACCAQDRKKSLAYKHLSS
Subjt:  SKSKKVKRNHAKEEDNRYA---------AEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSS

Query:  VVSKRKRYDFLSDFVPEKLKFEDALKERSMAESGKD
        VV KRKRYDFLSDFVPEKLKFEDALKERSMAESGKD
Subjt:  VVSKRKRYDFLSDFVPEKLKFEDALKERSMAESGKD

SwissProt top hitse value%identityAlignment
P79007 Transcriptional activator hap58.6e-0532.93Show/hide
Query:  KIYKFPMHRIKKIMR--DENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFV
        K    P+ RIKK+M+  D+  +  I+ EA FL  K SE+F+ +    A+    ++++++L    +++ VSK + YDFL D +
Subjt:  KIYKFPMHRIKKIMR--DENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFV

Q8LCG7 Nuclear transcription factor Y subunit C-21.1e-0428.71Show/hide
Query:  EEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKLKFEDALKERS
        E   + K +  P+ RIKKIM+ +     I+ EA  +  KA EMF+++    A+    ++++++L    +++ +S+   +DFL D +P      D LKE  
Subjt:  EEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKLKFEDALKERS

Query:  M
        +
Subjt:  M

Q9JKP8 Chromatin accessibility complex protein 13.5e-0630.17Show/hide
Query:  DNRYAAEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKL---K
        D     E+  ++++   P+ RI+ IM+       INQEAL L  KA+E+F+      +Y   +   KK+L Y  L+S     +   FL+D +P+K+   K
Subjt:  DNRYAAEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKL---K

Query:  FEDALKERSMAESGKD
        +   LKE+   E   +
Subjt:  FEDALKERSMAESGKD

Q9NRG0 Chromatin accessibility complex protein 12.7e-0631.13Show/hide
Query:  EEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKL---KFEDALK
        ++  E+++   P+ RI+ IM+       INQEAL L  KA+E+F+      +Y   +   KK L Y  L++   + + + FL+D +P+K+   K+   LK
Subjt:  EEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKL---KFEDALK

Query:  ERSMAE
        E    E
Subjt:  ERSMAE

Q9V452 Chromatin accessibility complex 16kD protein4.6e-0634Show/hide
Query:  PMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYA-CCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKLK---FEDALKERSMAESGKD
        P+ R++ IM+       I  E LFL+ K +E+F+      AY     Q   ++L Y+HLS VV+K K  +FL   VP+K++   F++ L+    A S  D
Subjt:  PMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYA-CCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKLK---FEDALKERSMAESGKD

Arabidopsis top hitse value%identityAlignment
AT1G07980.1 nuclear factor Y, subunit C101.5e-2037.5Show/hide
Query:  MASSKKSSTEAKSKEVGTSKPSPKAKTHNNAR--NSDKDISKKKKKKKKISISISTNNGSVKDNHALAVSAPGASASEDADAADEDKAETTSRKSNTSKS
        M SSKK   +    +V  +K S ++K  + +R   +   ++  KKK +   IS S+++ SV++             +   D A +     + R +  S  
Subjt:  MASSKKSSTEAKSKEVGTSKPSPKAKTHNNAR--NSDKDISKKKKKKKKISISISTNNGSVKDNHALAVSAPGASASEDADAADEDKAETTSRKSNTSKS

Query:  KKVKRNHAKEEDNRYAAEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLS
           K +  +EED     +  AE+   KFPM+RI++IMR +NS  +I Q+A+FLVNKA+EMF+ +F ++AY    +D+KK + YKHLSSVVS  +RY+FL+
Subjt:  KKVKRNHAKEEDNRYAAEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLS

Query:  DFVPEKLKFEDALK--ERSMAESG
        D VPEKLK E AL+  ER M ++G
Subjt:  DFVPEKLKFEDALK--ERSMAESG

AT1G56170.1 nuclear factor Y, subunit C28.0e-0628.71Show/hide
Query:  EEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKLKFEDALKERS
        E   + K +  P+ RIKKIM+ +     I+ EA  +  KA EMF+++    A+    ++++++L    +++ +S+   +DFL D +P      D LKE  
Subjt:  EEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKLKFEDALKERS

Query:  M
        +
Subjt:  M

AT1G56170.2 nuclear factor Y, subunit C28.0e-0628.71Show/hide
Query:  EEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKLKFEDALKERS
        E   + K +  P+ RIKKIM+ +     I+ EA  +  KA EMF+++    A+    ++++++L    +++ +S+   +DFL D +P      D LKE  
Subjt:  EEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKLKFEDALKERS

Query:  M
        +
Subjt:  M

AT5G63470.1 nuclear factor Y, subunit C42.3e-0528.28Show/hide
Query:  RYAAEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVP-EKLKFED
        R   E+  + K ++ P+ RIKKIM+ +     I+ EA  L  KA E+F+++    ++    ++++++L    +++ +++   +DFL D VP E++K E+
Subjt:  RYAAEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVP-EKLKFED

AT5G63470.2 nuclear factor Y, subunit C42.3e-0528.28Show/hide
Query:  RYAAEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVP-EKLKFED
        R   E+  + K ++ P+ RIKKIM+ +     I+ EA  L  KA E+F+++    ++    ++++++L    +++ +++   +DFL D VP E++K E+
Subjt:  RYAAEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVP-EKLKFED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCATCCAAAAAATCAAGTACGGAAGCGAAGAGCAAAGAAGTGGGAACCTCCAAGCCATCCCCCAAAGCCAAGACCCACAACAATGCCAGAAATTCCGACAAGGA
TATTTCTAAGAAGAAGAAGAAGAAGAAGAAGATTAGCATTAGCATTAGCACCAACAATGGCTCCGTCAAGGACAACCACGCCTTAGCTGTTTCTGCTCCAGGAGCCTCAG
CCTCTGAGGACGCCGATGCCGCCGATGAAGACAAAGCCGAAACCACAAGTAGAAAATCTAATACCTCCAAATCGAAGAAAGTTAAACGGAACCATGCCAAGGAAGAAGAT
AATCGTTATGCCGCAGAAGAAGAAGCCGAGGAGAAGATTTATAAATTCCCTATGCATCGGATCAAGAAAATCATGAGGGATGAAAATTCTGATTTGCGTATTAATCAGGA
AGCTTTGTTTCTCGTCAACAAAGCTTCGGAGATGTTTCTCGTACAATTTTGCAAAGATGCATATGCATGTTGTGCTCAGGATCGCAAGAAGTCTCTTGCTTACAAGCATC
TATCATCAGTAGTTTCCAAAAGGAAGAGATACGACTTTCTTTCAGATTTTGTTCCAGAGAAGTTAAAATTTGAAGATGCGTTAAAGGAAAGAAGCATGGCAGAATCAGGA
AAGGACTAG
mRNA sequenceShow/hide mRNA sequence
CAAACAACCAAACATTAACAATGGCATCATCCAAAAAATCAAGTACGGAAGCGAAGAGCAAAGAAGTGGGAACCTCCAAGCCATCCCCCAAAGCCAAGACCCACAACAAT
GCCAGAAATTCCGACAAGGATATTTCTAAGAAGAAGAAGAAGAAGAAGAAGATTAGCATTAGCATTAGCACCAACAATGGCTCCGTCAAGGACAACCACGCCTTAGCTGT
TTCTGCTCCAGGAGCCTCAGCCTCTGAGGACGCCGATGCCGCCGATGAAGACAAAGCCGAAACCACAAGTAGAAAATCTAATACCTCCAAATCGAAGAAAGTTAAACGGA
ACCATGCCAAGGAAGAAGATAATCGTTATGCCGCAGAAGAAGAAGCCGAGGAGAAGATTTATAAATTCCCTATGCATCGGATCAAGAAAATCATGAGGGATGAAAATTCT
GATTTGCGTATTAATCAGGAAGCTTTGTTTCTCGTCAACAAAGCTTCGGAGATGTTTCTCGTACAATTTTGCAAAGATGCATATGCATGTTGTGCTCAGGATCGCAAGAA
GTCTCTTGCTTACAAGCATCTATCATCAGTAGTTTCCAAAAGGAAGAGATACGACTTTCTTTCAGATTTTGTTCCAGAGAAGTTAAAATTTGAAGATGCGTTAAAGGAAA
GAAGCATGGCAGAATCAGGAAAGGACTAGGCTTCTCGATATTTTAATTTGAACATTTCATCTTGTTCTGTGGATGTGTTGTATATTTAGGTATGTCAATGTGAATCTAAG
GAAGTTAGATACAACATACAACATACATTTTTTTTAAACTACGTACCTGTAACATGTTTATTGACATCTTAAATCTAATCTAACAATCCATTCTAACATGATTATTCTTA
TATACACACACACACATACATACATGATTTACTGCTAAAAAGATTAATCAGGTAAGTGTGCCATATTTTGACGATTAGTTCAGTTATTCTACGAGAACATTTGCAATTTC
TTCCCACTATTTGTGTTTGGTTAGGTATCTGC
Protein sequenceShow/hide protein sequence
MASSKKSSTEAKSKEVGTSKPSPKAKTHNNARNSDKDISKKKKKKKKISISISTNNGSVKDNHALAVSAPGASASEDADAADEDKAETTSRKSNTSKSKKVKRNHAKEED
NRYAAEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKLKFEDALKERSMAESG
KD