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CsGy6G016560 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy6G016560
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description60S ribosomal protein L29
Genome locationGy14Chr6:15602172..15606702
RNA-Seq ExpressionCsGy6G016560
SyntenyCsGy6G016560
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR002673 - Ribosomal protein L29e


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN47471.2 hypothetical protein Csa_023012 [Cucumis sativus]8.45e-123100Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEECKGMRHSVPFKTVKFGGSRKGRRRPKATKVVPVEMKIRA
        MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEECKGMRHSVPFKTVKFGGSRKGRRRPKATKVVPVEMKIRA
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEECKGMRHSVPFKTVKFGGSRKGRRRPKATKVVPVEMKIRA

Query:  TAMDSRSKTLEILSLAHRAMTLLPLLQFFGDVPALVTQGVTGKPSTVEFANVQQQQGQQFAPQVSQTPVQNLSNGQPNRLNRNAT
        TAMDSRSKTLEILSLAHRAMTLLPLLQFFGDVPALVTQGVTGKPSTVEFANVQQQQGQQFAPQVSQTPVQNLSNGQPNRLNRNAT
Subjt:  TAMDSRSKTLEILSLAHRAMTLLPLLQFFGDVPALVTQGVTGKPSTVEFANVQQQQGQQFAPQVSQTPVQNLSNGQPNRLNRNAT

XP_008458370.1 PREDICTED: 60S ribosomal protein L29-1 [Cucumis melo]5.31e-3298.36Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS+KAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

XP_008458371.1 PREDICTED: 60S ribosomal protein L29-1-like [Cucumis melo]3.03e-3196.72Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS+KAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHN KSGENASGEE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

XP_010534701.1 PREDICTED: 60S ribosomal protein L29-1 [Tarenaya hassleriana]2.14e-3195.08Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQSHKAHKNGIKKPR+HRHTSTKGMDPKFLRNQRYA+KHN+KSGENASGEE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

XP_011657268.1 60S ribosomal protein L29-1 [Cucumis sativus]6.57e-33100Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

TrEMBL top hitse value%identityAlignment
A0A0A0KCX6 60S ribosomal protein L293.18e-33100Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

A0A1S3C7P2 60S ribosomal protein L291.47e-3196.72Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS+KAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHN KSGENASGEE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

A0A1S3C7U0 60S ribosomal protein L292.57e-3298.36Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS+KAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

A0A6D2HT42 60S ribosomal protein L298.10e-2991.8Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHTSTKGMDPKFLRNQRYA+KHN KSGENAS EE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

V9HZW1 60S ribosomal protein L292.71e-2991.8Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS+KAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYA+KHN KSGE  SGEE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

SwissProt top hitse value%identityAlignment
P47914 60S ribosomal protein L298.9e-1463.08Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEECKGM
        MAKSKNHT HNQS K H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K  +       K M
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEECKGM

Q58DW3 60S ribosomal protein L298.9e-1463.08Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEECKGM
        MAKSKNHT HNQS K H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K  +       K M
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEECKGM

Q84WM0 60S ribosomal protein L29-26.8e-2286.89Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGENA  EE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

Q95281 60S ribosomal protein L298.9e-1463.08Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEECKGM
        MAKSKNHT HNQS K H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K  +       K M
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEECKGM

Q9M7X7 60S ribosomal protein L29-12.3e-2286.89Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GENAS EE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

Arabidopsis top hitse value%identityAlignment
AT3G06680.1 Ribosomal L29e protein family4.8e-2386.89Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGENA  EE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

AT3G06680.2 Ribosomal L29e protein family4.8e-2386.89Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGENA  EE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

AT3G06700.1 Ribosomal L29e protein family1.7e-2386.89Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GENAS EE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

AT3G06700.2 Ribosomal L29e protein family1.7e-2386.89Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GENAS EE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE

AT3G06700.3 Ribosomal L29e protein family1.7e-2386.89Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GENAS EE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGTCGAAGAATCACACAGCTCACAATCAGTCCCACAAAGCCCATAAGAACGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACCAAAGGGATGGACCC
GAAGTTCCTTAGGAACCAGAGGTACGCGAAGAAACACAATACCAAGAGTGGGGAAAATGCTTCTGGGGAAGAGTGCAAGGGCATGAGACACTCAGTTCCATTTAAAACTG
TAAAATTCGGTGGAAGCCGGAAAGGAAGGAGAAGGCCAAAGGCGACAAAGGTGGTACCAGTGGAGATGAAAATAAGAGCTACTGCTATGGATTCTAGAAGCAAAACTTTA
GAGATTCTGAGTTTGGCACACAGGGCCATGACTCTGCTTCCACTGCTTCAGTTCTTTGGAGACGTTCCAGCCCTCGTCACTCAAGGAGTGACAGGAAAACCTTCTACAGT
AGAATTTGCTAATGTCCAACAACAACAAGGTCAACAGTTTGCACCACAAGTCAGCCAGACTCCAGTACAAAATCTTTCTAATGGCCAGCCCAATCGATTAAACAGAAATG
CAACGTCTTTGCCTCAAGAAATATTTAGGTGTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAGTCGAAGAATCACACAGCTCACAATCAGTCCCACAAAGCCCATAAGAACGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACCAAAGGGATGGACCC
GAAGTTCCTTAGGAACCAGAGGTACGCGAAGAAACACAATACCAAGAGTGGGGAAAATGCTTCTGGGGAAGAGTGCAAGGGCATGAGACACTCAGTTCCATTTAAAACTG
TAAAATTCGGTGGAAGCCGGAAAGGAAGGAGAAGGCCAAAGGCGACAAAGGTGGTACCAGTGGAGATGAAAATAAGAGCTACTGCTATGGATTCTAGAAGCAAAACTTTA
GAGATTCTGAGTTTGGCACACAGGGCCATGACTCTGCTTCCACTGCTTCAGTTCTTTGGAGACGTTCCAGCCCTCGTCACTCAAGGAGTGACAGGAAAACCTTCTACAGT
AGAATTTGCTAATGTCCAACAACAACAAGGTCAACAGTTTGCACCACAAGTCAGCCAGACTCCAGTACAAAATCTTTCTAATGGCCAGCCCAATCGATTAAACAGAAATG
CAACGTCTTTGCCTCAAGAAATATTTAGGTGTTTCTGA
Protein sequenceShow/hide protein sequence
MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEECKGMRHSVPFKTVKFGGSRKGRRRPKATKVVPVEMKIRATAMDSRSKTL
EILSLAHRAMTLLPLLQFFGDVPALVTQGVTGKPSTVEFANVQQQQGQQFAPQVSQTPVQNLSNGQPNRLNRNATSLPQEIFRCF