CuGenDBv2

Gene ID	CsGy6G017085
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	3-hydroxyacyl-CoA dehydrogenase
Genome location	Gy14Chr6:17620030..17620527
RNA-Seq Expression	CsGy6G017085
Synteny	CsGy6G017085
Gene Ontology terms	GO:0006635 - fatty acid beta-oxidation (biological process) GO:0005777 - peroxisome (cellular component) GO:0009507 - chloroplast (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003857 - 3-hydroxyacyl-CoA dehydrogenase activity (molecular function) GO:0004165 - dodecenoyl-CoA delta-isomerase activity (molecular function) GO:0004300 - enoyl-CoA hydratase activity (molecular function) GO:0008692 - 3-hydroxybutyryl-CoA epimerase activity (molecular function) GO:0070403 - NAD+ binding (molecular function)
InterPro domains	IPR008927 - 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8647099.1 hypothetical protein Csa_021744 [Cucumis sativus]

3.11e-44

96.34

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Query:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGRVSPLKLRHLRLSFCWLYTSGRYFINDSVRYFYL
        MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGRVSPLKLRHLRLSFCWLYTSGRYFINDSVR+ +L
Subjt:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGRVSPLKLRHLRLSFCWLYTSGRYFINDSVRYFYL

KAG6575075.1 hypothetical protein SDJN03_25714, partial [Cucurbita argyrosperma subsp. sororia]

3.09e-22

94.12

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Query:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGRVS
        MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAG  +
Subjt:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGRVS

KAG6593976.1 hypothetical protein SDJN03_13452, partial [Cucurbita argyrosperma subsp. sororia]

3.09e-22

94.12

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Query:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGRVS
        MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAG  +
Subjt:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGRVS

XP_023547607.1 glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a-like [Cucurbita pepo subsp. pepo]

3.09e-22

94.12

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Query:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGRVS
        MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAG  +
Subjt:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGRVS

XP_031743671.1 glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a-like [Cucumis sativus]

8.92e-23

100

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Query:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGR
        MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGR
Subjt:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KI31 3-hydroxyacyl-CoA dehydrogenase

1.50e-22

94.12

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Query:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGRVS
        MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAG  +
Subjt:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGRVS

A0A1S3C8F0 3-hydroxyacyl-CoA dehydrogenase

1.50e-22

94.12

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Query:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGRVS
        MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAG  +
Subjt:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGRVS

A0A6J1CBF0 3-hydroxyacyl-CoA dehydrogenase

1.50e-22

94.12

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Query:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGRVS
        MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAG  +
Subjt:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGRVS

A0A6J1EWF3 3-hydroxyacyl-CoA dehydrogenase

1.50e-22

94.12

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Query:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGRVS
        MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAG  +
Subjt:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGRVS

A0A6J1KLC6 3-hydroxyacyl-CoA dehydrogenase

1.50e-22

94.12

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Query:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGRVS
        MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAG  +
Subjt:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGRVS

SwissProt top hits

e value

%identity

Alignment

O49809 Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a

9.6e-18

80.39

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Query:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGRVS
        MPMGPFRL DLVGFGVAIAT  QF++NFP+RT+KSMIIPLMQEDKRAG  +
Subjt:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGRVS

Q39659 Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a

5.3e-16

81.25

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Query:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAG
        MPMGPFRL DLVGFGVA AT  QFVQ FP+RT+KSM+IPLMQEDK AG
Subjt:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAG

Q8W1L6 Peroxisomal fatty acid beta-oxidation multifunctional protein

3.5e-04

42.86

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Query:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGR
        MPMGPF+L DL G+GVA+A    +   F  R   S ++ LM ++ R G+
Subjt:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGR

Q9ZPI5 Peroxisomal fatty acid beta-oxidation multifunctional protein MFP2

8.1e-17

78.43

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Query:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGRVS
        MPMGPFRL DLVGFGVAIAT  QF++NF +RT+KSMIIPLMQEDKRAG  +
Subjt:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGRVS

Q9ZPI6 Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1

6.0e-04

35.29

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Query:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGRVS
        +P+GPF+L DL G G+ +A G  + + + DR F+S +  L+ +  R G+++
Subjt:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGRVS

Arabidopsis top hits

e value

%identity

Alignment

AT3G06860.1 multifunctional protein 2

5.8e-18

78.43

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Query:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGRVS
        MPMGPFRL DLVGFGVAIAT  QF++NF +RT+KSMIIPLMQEDKRAG  +
Subjt:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGRVS

AT4G29010.1 Enoyl-CoA hydratase/isomerase family

4.3e-05

35.29

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Query:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGRVS
        +P+GPF+L DL G G+ +A G  + + + DR F+S +  L+ +  R G+++
Subjt:  MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGRVS

Sequences

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CDS sequence

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ATGCCAATGGGCCCCTTCAGATTGATTGATCTTGTTGGTTTTGGGGTGGCTATAGCAACCGGTGGTCAGTTTGTTCAGAATTTTCCTGATAGAACCTTCAAATCTATGAT
AATTCCTCTTATGCAAGAGGATAAGAGAGCAGGTAGAGTTTCACCCCTTAAACTCAGACACTTACGTCTATCATTTTGCTGGCTTTACACTTCCGGAAGATATTTTATCA
ATGATTCTGTGAGGTATTTTTATTTATCCGGGAGTAATTACTGCTCAGCACACACTCAACTCACATATGAACACCATACTTTCAGACATTCCCGAACTCATTGTCAGAGG
TTTAGAAAAAAATCCATCCTATATAAGCATAAAACCCTAATGATTGGCAGTCTATGGAATCACATTCTCAAATATTTTATGTTTCTTCTTTAG

mRNA sequence

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Protein sequence

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MPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMIIPLMQEDKRAGRVSPLKLRHLRLSFCWLYTSGRYFINDSVRYFYLSGSNYCSAHTQLTYEHHTFRHSRTHCQR
FRKKSILYKHKTLMIGSLWNHILKYFMFLL

CsGy6G017085 (gene) of Cucumber (Gy14) v2.1 genome