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CsGy6G017730 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy6G017730
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationGy14Chr6:18554799..18557084
RNA-Seq ExpressionCsGy6G017730
SyntenyCsGy6G017730
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
THG18626.1 hypothetical protein TEA_029950 [Camellia sinensis var. sinensis]4.16e-0557.5Show/hide
Query:  VGYQLKAFPVTFAGTNLCAMEDEVWKKTDTYIFMLQETGE
        +GYQ++A P++F GTN+ AM+DEV KKTD Y+ MLQ++ E
Subjt:  VGYQLKAFPVTFAGTNLCAMEDEVWKKTDTYIFMLQETGE
TYK23780.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]9.52e-1797.62Show/hide
Query:  MVGYQLKAFPVTFAGTNLCAMEDEVWKKTDTYIFMLQETGET
        MVGYQLKAF VTFAGTNLCAMEDEVWKKTDTYIFMLQETGET
Subjt:  MVGYQLKAFPVTFAGTNLCAMEDEVWKKTDTYIFMLQETGET
XP_028060023.1 probable receptor-like serine/threonine-protein kinase At5g57670 isoform X1 [Camellia sinensis]4.49e-0557.5Show/hide
Query:  VGYQLKAFPVTFAGTNLCAMEDEVWKKTDTYIFMLQETGE
        +GYQ++A P++F GTN+ AM+DEV KKTD Y+ MLQ++ E
Subjt:  VGYQLKAFPVTFAGTNLCAMEDEVWKKTDTYIFMLQETGE
XP_028060025.1 uncharacterized protein LOC114263646 [Camellia sinensis]2.29e-0560Show/hide
Query:  VGYQLKAFPVTFAGTNLCAMEDEVWKKTDTYIFMLQETGE
        +GYQ++A PV+F GTN+ AM+DEV KKTD Y+ MLQ++ E
Subjt:  VGYQLKAFPVTFAGTNLCAMEDEVWKKTDTYIFMLQETGE
XP_031742726.1 uncharacterized protein LOC116404465 [Cucumis sativus]7.38e-0458.54Show/hide
Query:  VGYQLKAFPVTFAGTNLCAMEDEVWKKTDTYIFMLQETGET
        +GYQLKA P +  GT++ AME+EV KK D YI MLQ + ET
Subjt:  VGYQLKAFPVTFAGTNLCAMEDEVWKKTDTYIFMLQETGET
TrEMBL top hitse value%identityAlignment
A0A1S3B3G5 probable serine/threonine-protein kinase RLCKVII8.78e-0458.54Show/hide
Query:  VGYQLKAFPVTFAGTNLCAMEDEVWKKTDTYIFMLQETGET
        +GYQLKA P +  GT++ AME+EV KK D YI MLQ++ ET
Subjt:  VGYQLKAFPVTFAGTNLCAMEDEVWKKTDTYIFMLQETGET
A0A4S4ER28 Uncharacterized protein2.01e-0557.5Show/hide
Query:  VGYQLKAFPVTFAGTNLCAMEDEVWKKTDTYIFMLQETGE
        +GYQ++A P++F GTN+ AM+DEV KKTD Y+ MLQ++ E
Subjt:  VGYQLKAFPVTFAGTNLCAMEDEVWKKTDTYIFMLQETGE
A0A5D3DJP9 Putative serine/threonine-protein kinase RLCKVII8.79e-0458.54Show/hide
Query:  VGYQLKAFPVTFAGTNLCAMEDEVWKKTDTYIFMLQETGET
        +GYQLKA P +  GT++ AME+EV KK D YI MLQ++ ET
Subjt:  VGYQLKAFPVTFAGTNLCAMEDEVWKKTDTYIFMLQETGET
A0A5D3DK49 Pentatricopeptide repeat-containing protein4.61e-1797.62Show/hide
Query:  MVGYQLKAFPVTFAGTNLCAMEDEVWKKTDTYIFMLQETGET
        MVGYQLKAF VTFAGTNLCAMEDEVWKKTDTYIFMLQETGET
Subjt:  MVGYQLKAFPVTFAGTNLCAMEDEVWKKTDTYIFMLQETGET
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGGATACCAATTGAAAGCATTCCCAGTGACGTTTGCTGGAACTAACCTTTGTGCAATGGAAGATGAAGTTTGGAAGAAAACTGATACATACATATTCATGCTTCA
AGAGACTGGAGAGACGGTCTTTACTAGTAGCAGCATGTCTATACAGCAAGCATTGGATCCTGAGTCATCTTCTTGGTGTGAAGAAATAGTTCAGTTGCCTGTTAGAGTGA
AAAATCCAGAGATGTATTATGCTGCTTTTCAGGCCAATATGCCACCTAAGGAACACTTTTCTCTACAGGTGACGTATTTACCAGAATTATTTTTAGAGATTGGCTTTCAA
GAGTTTCCGTTTCTTCTTTCCTCCAGTTTCTTTCTTGAAACCAAAAACGAAAAAAGCAATATCCACAGATGTTATCTTATATTTGTTCAACTCATGATTGACTTGAATTG
CATCTTTAGACTCATTTCATTGAGTTATGGCACACGCTTTCAGATGTTCCCTATTTTTATTCAGTTATGCTTTGTAAAAGGGACTGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGGGATACCAATTGAAAGCATTCCCAGTGACGTTTGCTGGAACTAACCTTTGTGCAATGGAAGATGAAGTTTGGAAGAAAACTGATACATACATATTCATGCTTCA
AGAGACTGGAGAGACGGTCTTTACTAGTAGCAGCATGTCTATACAGCAAGCATTGGATCCTGAGTCATCTTCTTGGTGTGAAGAAATAGTTCAGTTGCCTGTTAGAGTGA
AAAATCCAGAGATGTATTATGCTGCTTTTCAGGCCAATATGCCACCTAAGGAACACTTTTCTCTACAGGTGACGTATTTACCAGAATTATTTTTAGAGATTGGCTTTCAA
GAGTTTCCGTTTCTTCTTTCCTCCAGTTTCTTTCTTGAAACCAAAAACGAAAAAAGCAATATCCACAGATGTTATCTTATATTTGTTCAACTCATGATTGACTTGAATTG
CATCTTTAGACTCATTTCATTGAGTTATGGCACACGCTTTCAGATGTTCCCTATTTTTATTCAGTTATGCTTTGTAAAAGGGACTGGATAG
Protein sequenceShow/hide protein sequence
MVGYQLKAFPVTFAGTNLCAMEDEVWKKTDTYIFMLQETGETVFTSSSMSIQQALDPESSSWCEEIVQLPVRVKNPEMYYAAFQANMPPKEHFSLQVTYLPELFLEIGFQ
EFPFLLSSSFFLETKNEKSNIHRCYLIFVQLMIDLNCIFRLISLSYGTRFQMFPIFIQLCFVKGTG