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CsGy6G019260 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy6G019260
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionProtein SPIRAL1-like 1
Genome locationGy14Chr6:19702925..19705470
RNA-Seq ExpressionCsGy6G019260
SyntenyCsGy6G019260
Gene Ontology termsGO:0043622 - cortical microtubule organization (biological process)
GO:0010005 - cortical microtubule, transverse to long axis (cellular component)
InterPro domainsIPR039613 - Protein SPIRAL1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144171.1 protein SPIRAL1-like 1 [Cucumis sativus]2.20e-55100Show/hide
Query:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT
        MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT
Subjt:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT

XP_008445444.1 PREDICTED: protein SPIRAL1-like 1 [Cucumis melo]1.74e-5294.62Show/hide
Query:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT
        MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPP +E KT+SKPAVSKPAATASPPADI+KQIPAGIHSSSSNNYLRADGQNTGNFIT
Subjt:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT

XP_022961880.1 protein SPIRAL1-like 2 [Cucurbita moschata]1.28e-4284.62Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT
        GRGVSSGGGQSSLGYLFG G+APNAGAPKGG+   PP +E K +SKPA SKPAATASPPAD +KQIPAGIHSSSSNNYLRADGQNTGNFIT
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT

XP_023537697.1 protein SPIRAL1-like 1 [Cucurbita pepo subsp. pepo]1.02e-3975.25Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPS----------EAKTISKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFI
        GRGVSSGGGQSSLGYLFG G++PNAGAPKGG+   P P+          EAK +SKPA SKPAATASPP D  KQIPAGIHSSSSNNYLRADGQNTGNFI
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPS----------EAKTISKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFI

Query:  T
        T
Subjt:  T

XP_038886245.1 protein SPIRAL1-like 1 [Benincasa hispida]4.98e-5293.55Show/hide
Query:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT
        MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPP +E KT+SKPAVSKPAATASPPAD++KQIPAGIHSSSSNNYLRADGQNTGNFIT
Subjt:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT

TrEMBL top hitse value%identityAlignment
A0A0A0KFN2 Uncharacterized protein1.07e-55100Show/hide
Query:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT
        MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT
Subjt:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT

A0A1S3BCR3 protein SPIRAL1-like 18.41e-5394.62Show/hide
Query:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT
        MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPP +E KT+SKPAVSKPAATASPPADI+KQIPAGIHSSSSNNYLRADGQNTGNFIT
Subjt:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT

A0A5A7VC71 Protein SPIRAL1-like 18.41e-5394.62Show/hide
Query:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT
        MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPP +E KT+SKPAVSKPAATASPPADI+KQIPAGIHSSSSNNYLRADGQNTGNFIT
Subjt:  MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT

A0A6J1HDG7 protein SPIRAL1-like 26.18e-4384.62Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT
        GRGVSSGGGQSSLGYLFG G+APNAGAPKGG+   PP +E K +SKPA SKPAATASPPAD +KQIPAGIHSSSSNNYLRADGQNTGNFIT
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT

A0A6J1K972 protein SPIRAL1-like 26.18e-4384.62Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT
        GRGVSSGGGQSSLGYLFG G+APNAGAPKGG+   PP +E K +SKPA SKPAATASPPAD +KQIPAGIHSSSSNNYLRADGQNTGNFIT
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT

SwissProt top hitse value%identityAlignment
B3H4F1 Protein SPIRAL1-like 12.1e-1658.24Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT
        GRGVS GGGQSSLGYLFG G+AP          AP P SE   IS  A   P   A+   +++KQIPAGI+ SS+NNY+RADGQNTGNF+T
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT

Q2QQ99 Protein SPIRAL1-like 33.3e-1455.43Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPA-VSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT
        GRGVSSGGGQSSLGYLFG G+AP                  K+  KPA V KPA ++S  A+  K+IPAGI SS +NNY+RA+GQN GNF+T
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPA-VSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT

Q2R0W8 Protein SPIRAL1-like 23.1e-1251.61Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPP--ADISKQIPAGIHSSSSNNYLRADGQNTGNFIT
        GRGVSSGGGQSSLGYLFG G+   A   K     P   +E +T   P      A A+ P  A+  K+IPAGI S+ +NNY RA GQN GNF+T
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPP--ADISKQIPAGIHSSSSNNYLRADGQNTGNFIT

Q7Y1L9 Protein SPIRAL1-like 14.8e-1358.06Show/hide
Query:  RGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAP-PPPSEAKTISKPAVSKPAATASP-PADISKQIPAGIHSS-SSNNYLRADGQNTGNFIT
        RG S+GGGQSSLGYLFG  +AP   A      AP P P+ A      AV+ PA   SP  AD +KQIPAGI  S S+NNY RADGQNTGNF+T
Subjt:  RGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAP-PPPSEAKTISKPAVSKPAATASP-PADISKQIPAGIHSS-SSNNYLRADGQNTGNFIT

Q9LE54 Protein SPIRAL1-like 23.3e-1452.75Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT
        GRGVS+GGGQSSLGYLFG G+AP   A           + A+T S        A A+   D  KQ+PAG++S+S+NNY+RA+GQNTGNFIT
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT

Arabidopsis top hitse value%identityAlignment
AT1G26355.1 SPIRAL1-like11.5e-1758.24Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT
        GRGVS GGGQSSLGYLFG G+AP          AP P SE   IS  A   P   A+   +++KQIPAGI+ SS+NNY+RADGQNTGNF+T
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT

AT1G69230.1 SPIRAL1-like22.4e-1552.75Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT
        GRGVS+GGGQSSLGYLFG G+AP   A           + A+T S        A A+   D  KQ+PAG++S+S+NNY+RA+GQNTGNFIT
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT

AT1G69230.2 SPIRAL1-like22.4e-1552.75Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT
        GRGVS+GGGQSSLGYLFG G+AP   A           + A+T S        A A+   D  KQ+PAG++S+S+NNY+RA+GQNTGNFIT
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT

AT2G03680.1 spiral14.2e-1253.06Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATA-------SPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT
        GRG S GGGQSSL YLFG GDAP   APK      P P+E+     P V+   ATA         PA+++KQIPAGI  +  NNY RA+GQNTGNF+T
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATA-------SPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT

AT2G03680.2 spiral14.2e-1253.06Show/hide
Query:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATA-------SPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT
        GRG S GGGQSSL YLFG GDAP   APK      P P+E+     P V+   ATA         PA+++KQIPAGI  +  NNY RA+GQNTGNF+T
Subjt:  GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATA-------SPPADISKQIPAGIHSSSSNNYLRADGQNTGNFIT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGGTCGTGGAGTTAGCAGTGGTGGGGGGCAGAGCTCACTGGGGTACCTGTTTGGTGATGGAGATGCTCCTAATGCAGGTGCACCAAAAGGTGGCCGCCAAGCACC
GCCGCCTCCAAGTGAAGCGAAGACTATATCCAAACCAGCAGTGTCTAAACCTGCTGCTACTGCTTCACCACCTGCAGATATTTCCAAGCAGATTCCAGCTGGTATTCACA
GTAGCTCATCAAACAACTATTTGAGGGCAGATGGTCAAAACACTGGCAATTTCATAACGGTATAG
mRNA sequenceShow/hide mRNA sequence
AGTAATTAAATGATTTTTTTTTTAAAAAGGGAGAGTGTAATAAATAAATAATTGGAGTATCTTGGGAGACTGCGTGCTAGGTACGAGTACACCACTCTCTCCACTCTCAT
TTCTTCCTTCCTTCCCTCTTAACTCCCAGGTTCCCCTCAGATCCCATCGTCGCCGGAAGGCAAGCTTCTGAGTTGTGACATTTCAAAGAAACCGAAGTGCCATGGGGGGT
CGTGGAGTTAGCAGTGGTGGGGGGCAGAGCTCACTGGGGTACCTGTTTGGTGATGGAGATGCTCCTAATGCAGGTGCACCAAAAGGTGGCCGCCAAGCACCGCCGCCTCC
AAGTGAAGCGAAGACTATATCCAAACCAGCAGTGTCTAAACCTGCTGCTACTGCTTCACCACCTGCAGATATTTCCAAGCAGATTCCAGCTGGTATTCACAGTAGCTCAT
CAAACAACTATTTGAGGGCAGATGGTCAAAACACTGGCAATTTCATAACGGTATAGCTACCCTTTATGAGTATTCTGCAATTTATTTGGTCTAATTTGACTGCTAGCATG
TTGCCGATGATTGATACATATATAATCTTGGATTAGGGTCCATATTGCACCTATTTAGTTTAGCATACGATACGTCAATTGCAGTTTGCTTGGATTAGATGTTTACTGCA
CCTATTTATCTAGTCTCGTCCTCCTCTTTCTACCTATCTTTGAATTGTACGATCCAAGAGTAGTAGCCAAACGGGCATGTGCTAAAAGAAGATTGTACTGTAACTGATCT
TTTGCCAAAATGGGACCATGATATACCTTGATATGATATAATCAAAAAGGGGATTATAGTGATTTATTAGCTTTGTTTGTGGATGGTGCAGGATCGGCCTTCAACCAAGG
TTCACGCCGCCCCGGGCGGGGGATCTTCTCTGGATTATCTGTTTGGTGGTGCTGGTGGAAAATGAAACCTGCAAATCAGAACTAAATAGAGCTATTTGACGATCCATTTT
ATGTGAATTTTTATATCGTGTCGAAGGGGCAATGTTTTTTTTTCTTCTTTTCTTCCATCTGAAACGATACTATGGCAGGACGATATGCTTTTCGATGTAATGTGTAGATG
CTTATGGTTTCTGCTCTCTGTTCTTGGGTTTGATTCAGTCAAAATTTTATTTTGGATTCATGAAAAGCTGTTGTGAGCTATCCGTGTCTGTCAAGGATCTTTCTTACAAG
TAATGCATAAACTCTCTTTTATCTTCATGGTCTTCTATTTCTATTCAGATTAGCTCCATTTCTTCAAACTCCAAATGACTTCTTAATCTAAAAGGCAGAAACATAGATTG
AACTTTTCTTCATTCTTTCTTCTTAAACTAATTGGTTTTGTGAAGTTGTTGGATTTATCAACAATATCTTGAATGGAATTTAGTATAACGGATCAAAATGTACATTAAAT
TACATCATCGGAAAAAGAAAAAAAACTCACAAGTTTCAATTTTTACATTTATAGAAAT
Protein sequenceShow/hide protein sequence
MGGRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPADISKQIPAGIHSSSSNNYLRADGQNTGNFITV